Os03g0726500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0726500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 147.42 | 0.57 | 13.2 | -1.89 | 3.06 | 2.18 | 2.27 | 3.41 | 0.192 | 10.2 | 23.45 | 62 | -- | -- |
| 161.16 | 0.596 | 13.2 | -1.49 | 3.05 | 1.73 | 1.51 | -- | 0.261 | 10.2 | 23.45 | 62 | -- | -- |
| 162.98 | 0.595 | 13.2 | -1.78 | 2.94 | 1.93 | -- | 2.81 | 0.209 | 10.3 | 24.2 | 243 | -- | -- |
| 165.87 | 0.6 | 13.1 | -1.32 | 2.54 | 1.85 | -- | -- | 0.391 | 10.5 | 29.7 | 477 | -- | -- |
| 465.18 | 1 | 13.2 | -1.06 | -- | 3.67 | -- | 0.841 | 0.482 | -- | 201.1 | 758 | -- | -- |
| 200.46 | 0.664 | 13.2 | -1.86 | 2.84 | -- | 1.61 | -- | 0.0127 | 9.92 | -- | -- | -- | -- |
| 210.5 | 0.679 | 13.2 | -1.8 | 2.83 | -- | -- | -- | 0.0164 | 9.95 | -- | -- | -- | -- |
| 468.12 | 1.01 | 13.2 | -0.866 | -- | 3.78 | -- | -- | 0.594 | -- | 72.9 | 752 | -- | -- |
| 208.49 | 0.672 | 13.1 | -- | 2.41 | 2.34 | -- | -- | 0.525 | 9.86 | 46.29 | 925 | -- | -- |
| 693.02 | 1.23 | 13.3 | -1.83 | -- | -- | -- | -- | 0.0156 | -- | -- | -- | -- | -- |
| 295.9 | 0.805 | 13.2 | -- | 2.84 | -- | -- | -- | 0.217 | 9.99 | -- | -- | -- | -- |
| 485.85 | 1.03 | 13.1 | -- | -- | 4.11 | -- | -- | 0.732 | -- | 79.04 | 760 | -- | -- |
| 781.67 | 1.3 | 13.2 | -- | -- | -- | -- | -- | 0.219 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 142.48 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 6 |
| 5 | 143.98 | temperature | 10 | 720 | > th | dose dependent | rect. | 16 | 10 |
| 9 | 144.37 | temperature | 30 | 270 | < th | dose dependent | sin | 12 | NA |
| 13 | 144.64 | temperature | 30 | 720 | < th | dose dependent | sin | 16 | NA |
| 18 | 144.91 | temperature | 30 | 720 | < th | dose dependent | rect. | 19 | 2 |
| 26 | 145.47 | temperature | 10 | 720 | > th | dose dependent | rect. | 14 | 14 |
| 61 | 146.93 | temperature | 30 | 270 | < th | dose dependent | rect. | 18 | 15 |
| 88 | 147.54 | temperature | 30 | 720 | < th | dose dependent | rect. | 10 | 15 |
| 89 | 147.57 | temperature | 25 | 10 | < th | dose dependent | rect. | 18 | 18 |
| 150 | 148.37 | temperature | 10 | 720 | > th | dose dependent | sin | 15 | NA |
| 165 | 148.63 | temperature | 25 | 90 | < th | dose dependent | rect. | 5 | 23 |
| 180 | 148.79 | temperature | 20 | 90 | > th | dose independent | rect. | 15 | 14 |
| 205 | 149.11 | temperature | 20 | 270 | > th | dose dependent | sin | 12 | NA |
| 238 | 149.38 | temperature | 25 | 10 | < th | dose dependent | rect. | 18 | 10 |
| 269 | 149.61 | temperature | 25 | 270 | < th | dose dependent | rect. | 7 | 22 |
| 273 | 149.63 | temperature | 10 | 270 | > th | dose dependent | sin | 12 | NA |
| 311 | 149.87 | temperature | 20 | 10 | > th | dose independent | rect. | 16 | 14 |
| 328 | 150.01 | temperature | 25 | 10 | < th | dose dependent | rect. | 6 | 22 |
| 433 | 150.73 | temperature | 10 | 720 | > th | dose dependent | rect. | 8 | 18 |
| 512 | 151.13 | temperature | 25 | 270 | < th | dose dependent | rect. | 10 | 23 |
| 538 | 151.31 | temperature | 20 | 720 | > th | dose dependent | rect. | 15 | 19 |
| 617 | 151.65 | temperature | 25 | 90 | < th | dose dependent | no | NA | NA |
| 668 | 151.92 | temperature | 25 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 671 | 151.94 | temperature | 25 | 90 | < th | dose dependent | rect. | 21 | 23 |
| 674 | 151.95 | temperature | 25 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 677 | 151.97 | temperature | 25 | 10 | < th | dose dependent | no | NA | NA |
| 682 | 151.98 | temperature | 25 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 686 | 151.99 | temperature | 25 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 702 | 152.04 | temperature | 25 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 786 | 152.51 | temperature | 10 | 720 | > th | dose dependent | rect. | 15 | 20 |
| 988 | 153.34 | temperature | 20 | 90 | > th | dose independent | rect. | 7 | 23 |
| 1000 | 153.40 | temperature | 25 | 720 | < th | dose independent | rect. | 16 | 6 |