BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0726500 Os03g0726500|AK069807
(475 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0726500 Conserved hypothetical protein 770 0.0
Os09g0344800 Protein of unknown function DUF81 family protein 316 3e-86
Os08g0389700 Protein of unknown function DUF81 family protein 310 2e-84
Os08g0387200 Protein of unknown function DUF81 family protein 301 5e-82
Os01g0786700 Conserved hypothetical protein 89 5e-18
>Os03g0726500 Conserved hypothetical protein
Length = 475
Score = 770 bits (1988), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/475 (82%), Positives = 393/475 (82%)
Query: 1 MAAAADLYGRLNRSSTRXXXXXXXXXXXXXXXXXXXVIPAAEPRAGDANGGLRLSSRSAR 60
MAAAADLYGRLNRSSTR VIPAAEPRAGDANGGLRLSSRSAR
Sbjct: 1 MAAAADLYGRLNRSSTRGFLAYVAAGAACAAVLACFVIPAAEPRAGDANGGLRLSSRSAR 60
Query: 61 VWPDLAFNWRVVVATVVGFLGSAFXXXXXXXXXXIFVPMLNLLVGFDTKSAAALSKCMIM 120
VWPDLAFNWRVVVATVVGFLGSAF IFVPMLNLLVGFDTKSAAALSKCMIM
Sbjct: 61 VWPDLAFNWRVVVATVVGFLGSAFGTVGGVGGGGIFVPMLNLLVGFDTKSAAALSKCMIM 120
Query: 121 GASASSVWYNLQVSHPTKEAPVIDYKLALLFQPMLMLGITIGVELSVIFPYWLITVLIII 180
GASASSVWYNLQVSHPTKEAPVIDYKLALLFQPMLMLGITIGVELSVIFPYWLITVLIII
Sbjct: 121 GASASSVWYNLQVSHPTKEAPVIDYKLALLFQPMLMLGITIGVELSVIFPYWLITVLIII 180
Query: 181 LFIGTSSRSFYKGILMWKDXXXXXXXXXXXXXXSKSSCAARDVVIDPSCEEPLLCQPQPK 240
LFIGTSSRSFYKGILMWKD SKSSCAARDVVIDPSCEEPLLCQPQPK
Sbjct: 181 LFIGTSSRSFYKGILMWKDETRIQMETREREEESKSSCAARDVVIDPSCEEPLLCQPQPK 240
Query: 241 EKSALETFLFNLRWKNILVLMTVWSSFLVLQIFKNNSQSCSTFYWVINILQVPVALSVFL 300
EKSALETFLFNLRWKNILVLMTVWSSFLVLQIFKNNSQSCSTFYWVINILQVPVALSVFL
Sbjct: 241 EKSALETFLFNLRWKNILVLMTVWSSFLVLQIFKNNSQSCSTFYWVINILQVPVALSVFL 300
Query: 301 WEGVQLCRESRARRMDGNWECVCEASIEWSPAQLIFCAFCXXXXXXXXXXXXXXXXXXXX 360
WEGVQLCRESRARRMDGNWECVCEASIEWSPAQLIFCAFC
Sbjct: 301 WEGVQLCRESRARRMDGNWECVCEASIEWSPAQLIFCAFCGLLGGTVGGLLGSGGGFILG 360
Query: 361 XXXXXXXCIPQVASATATXXXXXXXXXXXXEFYFLNRFPIPFAVYLICISILAGFWGQSL 420
CIPQVASATAT EFYFLNRFPIPFAVYLICISILAGFWGQSL
Sbjct: 361 PLLLELGCIPQVASATATFVMMFSSSLSVVEFYFLNRFPIPFAVYLICISILAGFWGQSL 420
Query: 421 VRKLVHVLKRASLIVFILSSVIFASALTMGVVGTQKSISMINNHEYMGFLDFCEK 475
VRKLVHVLKRASLIVFILSSVIFASALTMGVVGTQKSISMINNHEYMGFLDFCEK
Sbjct: 421 VRKLVHVLKRASLIVFILSSVIFASALTMGVVGTQKSISMINNHEYMGFLDFCEK 475
>Os09g0344800 Protein of unknown function DUF81 family protein
Length = 481
Score = 316 bits (809), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 170/426 (39%), Positives = 248/426 (58%), Gaps = 33/426 (7%)
Query: 60 RVWPDLAFNWRVVVATVVGFLGSAFXXXXXXXXXXIFVPMLNLLVGFDTKSAAALSKCMI 119
VWP++ W++V+ +++GF G+AF IFVPML L++GFD KS+ A+SKCMI
Sbjct: 75 HVWPEMELGWQIVLGSLIGFFGAAFGSVGGVGGGGIFVPMLTLIIGFDPKSSTAISKCMI 134
Query: 120 MGASASSVWYNLQVSHPTKEAPVIDYKLALLFQPMLMLGITIGVELSVIFPYWLITVLII 179
MGA+ S+V+YNL++ HPT + PVIDY LALL QPMLMLGI+IGV +V+FP WL+TVL+I
Sbjct: 135 MGAAVSTVYYNLKLKHPTLDMPVIDYDLALLIQPMLMLGISIGVIFNVLFPDWLVTVLLI 194
Query: 180 ILFIGTSSRSFYKGILMWKDXXXXXXXXXXXXXXSKSSCAARDVVIDPSCEE----PLLC 235
ILF+GTS+++F KG+ WK K A R ++ + EE PL
Sbjct: 195 ILFLGTSTKAFLKGVETWKKETII-----------KREAAKR---LEQTSEEPEYAPLPT 240
Query: 236 QP-------QPKEKSALETFLFNLRWKNILVLMTVWSSFLVLQIFKNNSQSCSTFYWVIN 288
P +P +++A + + N+ WK +L VW +FLVLQ+ KN + +CS++YW++N
Sbjct: 241 GPGAVADAKRPSDEAA--SLMKNIYWKEFGLLAFVWMAFLVLQVTKNYTATCSSWYWILN 298
Query: 289 ILQVPVALSVFLWEGVQLCRESRARRMDGNWECVCEASIEWSPAQLIFCAFCXXXXXXXX 348
+LQ+PV++ V ++E + L R GN + + QL F
Sbjct: 299 LLQIPVSVGVTMYEALGLMSGKRVLSSKGNEQTTLKFH------QLCIYCFFGITAGVVG 352
Query: 349 XXXXXXXXXXXXXXXXXXXCIPQVASATATXXXXXXXXXXXXEFYFLNRFPIPFAVYLIC 408
PQV+SATAT E+Y LNRFP+P+A+Y +
Sbjct: 353 GLLGLGGGFIMGPLFLELGIPPQVSSATATFAMMFSSSMSVVEYYLLNRFPVPYALYFVI 412
Query: 409 ISILAGFWGQSLVRKLVHVLKRASLIVFILSSVIFASALTMGVVGTQKSISMINNHEYMG 468
++ +A GQ +VR+L++ L RASLI+FIL+ +IF SA+++G VG I IN HEYMG
Sbjct: 413 VAFIAAIIGQHVVRRLINWLGRASLIIFILAFMIFVSAISLGGVGISNMIHRINQHEYMG 472
Query: 469 FLDFCE 474
F + C+
Sbjct: 473 FENLCK 478
>Os08g0389700 Protein of unknown function DUF81 family protein
Length = 465
Score = 310 bits (793), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 172/423 (40%), Positives = 240/423 (56%), Gaps = 27/423 (6%)
Query: 60 RVWPDLAFNWRVVVATVVGFLGSAFXXXXXXXXXXIFVPMLNLLVGFDTKSAAALSKCMI 119
VWP + F W++V+ ++GF G+AF IFVPML L++GFD KS+ A+SKCMI
Sbjct: 59 HVWPPMEFGWKIVLGILIGFFGAAFGSVGGVGGGGIFVPMLTLIIGFDAKSSTAISKCMI 118
Query: 120 MGASASSVWYNLQVSHPTKEAPVIDYKLALLFQPMLMLGITIGVELSVIFPYWLITVLII 179
MGA+ S+V+YNL++ HPT + PVIDY LALL QPMLMLGI+IGV +VIFP WLITVL+I
Sbjct: 119 MGAAVSTVYYNLKLKHPTLDMPVIDYDLALLIQPMLMLGISIGVLFNVIFPDWLITVLLI 178
Query: 180 ILFIGTSSRSFYKGILMWKDXXXXXXXXXXXXXXSKSSCAAR-DVVIDPSCEEPLLCQPQ 238
ILF+GTS+++F KG+ WK K A R + + + PL P
Sbjct: 179 ILFLGTSTKAFLKGVETWKKETIL-----------KREAAKRLEQIAEEPEYSPLPTGPN 227
Query: 239 -------PKEKSALETFLFNLRWKNILVLMTVWSSFLVLQIFKNNSQSCSTFYWVINILQ 291
P +++A + N+ WK +L VW +FLVLQ+ KN +CST+YWV+N LQ
Sbjct: 228 ATAESKAPSDEAA--SLWQNVYWKEFGLLAFVWIAFLVLQVTKNYMPTCSTWYWVLNFLQ 285
Query: 292 VPVALSVFLWEGVQLCRESRARRMDGNWECVCEASIEWSPAQLIFCAFCXXXXXXXXXXX 351
+PV++ V ++EG+ L + R G+ + + QL+ F
Sbjct: 286 IPVSVGVTMYEGLGLMQGRRVISSKGDEQTNLKFH------QLLVYCFFGMMAGVVGGLL 339
Query: 352 XXXXXXXXXXXXXXXXCIPQVASATATXXXXXXXXXXXXEFYFLNRFPIPFAVYLICISI 411
PQV+SATAT E+Y L+RFP+P+A++ ++
Sbjct: 340 GLGGGFIMGPLFLELGIPPQVSSATATFAMMFSSSMSVVEYYLLDRFPVPYALFFTVVAF 399
Query: 412 LAGFWGQSLVRKLVHVLKRASLIVFILSSVIFASALTMGVVGTQKSISMINNHEYMGFLD 471
A GQ +VRKL++ L RASLI+FILS +IF SA+++G VG I I HEYMGF +
Sbjct: 400 FAAIIGQHIVRKLINWLGRASLIIFILSFMIFISAISLGGVGISNMIGKIARHEYMGFDN 459
Query: 472 FCE 474
C
Sbjct: 460 ICN 462
>Os08g0387200 Protein of unknown function DUF81 family protein
Length = 469
Score = 301 bits (772), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 168/415 (40%), Positives = 236/415 (56%), Gaps = 16/415 (3%)
Query: 60 RVWPDLAFNWRVVVATVVGFLGSAFXXXXXXXXXXIFVPMLNLLVGFDTKSAAALSKCMI 119
VWP + F W++V+ + VGF+G+AF F+PML L++GFD KS+ A+SKCMI
Sbjct: 68 HVWPPMEFGWQIVLGSFVGFIGAAFGSIGGVGGGGFFMPMLTLIIGFDAKSSVAISKCMI 127
Query: 120 MGASASSVWYNLQVSHPTKEAPVIDYKLALLFQPMLMLGITIGVELSVIFPYWLITVLII 179
MGA+ S+V+ NL+ HPT + PVIDY LALL QPMLMLGI+IGV +VIFP WL+TVL+I
Sbjct: 128 MGAAVSTVYCNLKRKHPTLDMPVIDYDLALLIQPMLMLGISIGVIFNVIFPDWLVTVLLI 187
Query: 180 ILFIGTSSRSFYKGILMWKDXXXXXXXXXXXXXXSKSSCAARDVVIDPSCEEPLLCQPQP 239
ILF+GTS+++F KGI WK + R V P+ E +P
Sbjct: 188 ILFLGTSTKAFLKGIETWKKETIIKREAEKRSEQTSEELEYRPV---PASES------KP 238
Query: 240 KEKSALETFLFNLRWKNILVLMTVWSSFLVLQIFKNNSQSCSTFYWVINILQVPVALSVF 299
A+ + L N+ WK +L VW +FL LQ+ KN +CST+YWV+N+LQ+PV++ V
Sbjct: 239 PSDEAV-SILHNVYWKEFGLLAFVWIAFLALQVTKNYMPTCSTWYWVLNLLQIPVSVGVT 297
Query: 300 LWEGVQLCRESRARRMDGNWECVCEASIEWSPAQLIFCAFCXXXXXXXXXXXXXXXXXXX 359
++EG+ L + R +GN + + QL+ F
Sbjct: 298 MYEGLGLMQGRRVISSNGNEQTNLKFH------QLLMYCFFGITAGIVAGLLGVGGGSIL 351
Query: 360 XXXXXXXXCIPQVASATATXXXXXXXXXXXXEFYFLNRFPIPFAVYLICISILAGFWGQS 419
PQVASATAT E+YFL+RFP+P+A+YL ++ + GQ
Sbjct: 352 GPMFLDLGVPPQVASATATFSMMFSASMSAVEYYFLDRFPVPYALYLTVVAFFSAIVGQR 411
Query: 420 LVRKLVHVLKRASLIVFILSSVIFASALTMGVVGTQKSISMINNHEYMGFLDFCE 474
+VRK+++ L RAS+I+F LS +IF S + +G +G I I HEYMGF D C+
Sbjct: 412 MVRKVINWLGRASIIIFTLSIMIFLSTIPLGGIGIVNWIGKIERHEYMGFEDICK 466
>Os01g0786700 Conserved hypothetical protein
Length = 300
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 109/228 (47%), Gaps = 36/228 (15%)
Query: 72 VVATVVGFLGSAFXXXXXXXXXXIFVPMLNLLVGFDTKSAAALSKCMIMGASASSVWYNL 131
V+A ++ FL +AF ++VP+LN++ G K+A A S M+ G + S+V Y L
Sbjct: 6 VLACILSFLAAAFSSAGGVGGGSLYVPILNIVAGLSLKTATAFSTFMVTGGTLSNVLYTL 65
Query: 132 QVSHPTKEA---PVIDYKLALLFQPMLMLGITIGVELSVIFPYWLITVLIIILFIGTSSR 188
V ++ P+IDY +A++ QP L+LG+++GV +V+FP WLIT L + + +
Sbjct: 66 IVLRGHEKGGHQPLIDYDIAVVSQPCLLLGVSVGVICNVMFPEWLITALFAVFLASATFK 125
Query: 189 SFYKGILMWKDXXXXXXXXXXXXXXSKSSCAARDVV-----IDPSCEEPLLCQPQPKEKS 243
++ G+ W+ + AAR ++ + E LL Q
Sbjct: 126 TYGTGMKRWR----------------AETAAARRMLEGGSSLGDGAGEALLGQKDGDGH- 168
Query: 244 ALETFLFNLRWKNILVLMTVWSSFLVLQIFKNN----SQSCSTFYWVI 287
+ +++VL+T+W F V+ +F + S +T + V+
Sbjct: 169 -------RRQCVDLMVLVTIWLCFFVIHLFIGGEGAKTASSTTMFMVL 209
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.328 0.138 0.436
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 12,026,987
Number of extensions: 381404
Number of successful extensions: 1000
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 994
Number of HSP's successfully gapped: 8
Length of query: 475
Length of database: 17,035,801
Length adjustment: 105
Effective length of query: 370
Effective length of database: 11,553,331
Effective search space: 4274732470
Effective search space used: 4274732470
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 158 (65.5 bits)