Os08g0389700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF81 family protein.
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Os08g0389700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF81 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 238.43 | 0.725 | 9.48 | -3.12 | 0.907 | 2.46 | -1.24 | -1.68 | 0.0101 | 5.99 | 21.79 | 1947 | -- | -- |
| 244.77 | 0.729 | 9.42 | -2.52 | 0.888 | 2.46 | -1.03 | -- | 0.104 | 6.06 | 22 | 2000 | -- | -- |
| 241.97 | 0.724 | 9.48 | -3.1 | 0.9 | 2.47 | -- | -1.56 | 0.0258 | 5.75 | 21.8 | 1947 | -- | -- |
| 247.65 | 0.733 | 9.42 | -2.54 | 0.902 | 2.46 | -- | -- | 0.122 | 5.83 | 21.95 | 2000 | -- | -- |
| 281.25 | 0.781 | 9.5 | -3.11 | -- | 2.41 | -- | -1.62 | -0.0259 | -- | 22.03 | 2527 | -- | -- |
| 447.38 | 0.992 | 9.24 | -1.49 | 0.849 | -- | -1.19 | -- | 0.925 | 5.52 | -- | -- | -- | -- |
| 450.66 | 0.994 | 9.24 | -1.49 | 0.842 | -- | -- | -- | 0.929 | 5.25 | -- | -- | -- | -- |
| 287.87 | 0.79 | 9.46 | -2.52 | -- | 2.42 | -- | -- | 0.0936 | -- | 22.11 | 2508 | -- | -- |
| 387.33 | 0.917 | 9.32 | -- | 0.832 | 1.71 | -- | -- | 0.571 | 5.85 | 22.3 | 1897 | -- | -- |
| 487.7 | 1.03 | 9.25 | -1.46 | -- | -- | -- | -- | 0.95 | -- | -- | -- | -- | -- |
| 509.44 | 1.06 | 9.2 | -- | 0.817 | -- | -- | -- | 1.1 | 5.32 | -- | -- | -- | -- |
| 411.35 | 0.945 | 9.34 | -- | -- | 1.76 | -- | -- | 0.573 | -- | 22.36 | 1362 | -- | -- |
| 544.25 | 1.09 | 9.22 | -- | -- | -- | -- | -- | 1.11 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 238.13 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 9 |
| 24 | 239.76 | temperature | 15 | 1440 | > th | dose dependent | rect. | 20 | 11 |
| 30 | 239.91 | temperature | 15 | 1440 | > th | dose dependent | rect. | 5 | 1 |
| 53 | 240.30 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 3 |
| 60 | 240.40 | temperature | 25 | 1440 | < th | dose dependent | sin | 11 | NA |
| 61 | 240.41 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 6 |
| 63 | 240.43 | temperature | 30 | 1440 | < th | dose dependent | rect. | 5 | 1 |
| 230 | 242.71 | temperature | 15 | 1440 | > th | dose dependent | sin | 12 | NA |
| 551 | 248.36 | radiation | 1 | 14400 | < th | dose dependent | rect. | 2 | 5 |
| 584 | 248.96 | temperature | 15 | 1440 | > th | dose dependent | rect. | 22 | 1 |
| 587 | 248.97 | radiation | 1 | 14400 | < th | dose dependent | rect. | 21 | 10 |
| 602 | 249.28 | radiation | 30 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 663 | 250.04 | radiation | 1 | 14400 | < th | dose dependent | rect. | 2 | 13 |
| 691 | 250.34 | radiation | 30 | 14400 | > th | dose dependent | rect. | 16 | 16 |
| 723 | 250.66 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 22 |
| 725 | 250.67 | radiation | 1 | 14400 | < th | dose dependent | rect. | 21 | 18 |
| 729 | 250.70 | radiation | 1 | 14400 | < th | dose dependent | sin | 7 | NA |
| 813 | 251.45 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 11 |
| 816 | 251.46 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 927 | 252.65 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 939 | 252.77 | temperature | 25 | 1440 | < th | dose dependent | rect. | 2 | 23 |
| 946 | 252.84 | temperature | 25 | 1440 | < th | dose dependent | rect. | 5 | 23 |
| 968 | 253.01 | radiation | 1 | 14400 | < th | dose dependent | rect. | 8 | 23 |
| 995 | 253.21 | radiation | 1 | 14400 | < th | dose dependent | rect. | 2 | 20 |
| 997 | 253.21 | radiation | 1 | 14400 | < th | dose dependent | rect. | 14 | 22 |