BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0389700 Os08g0389700|AK065108
(465 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os08g0389700 Protein of unknown function DUF81 family protein 690 0.0
Os09g0344800 Protein of unknown function DUF81 family protein 565 e-161
Os08g0387200 Protein of unknown function DUF81 family protein 534 e-152
Os03g0726500 Conserved hypothetical protein 261 9e-70
AK109633 115 5e-26
Os01g0786700 Conserved hypothetical protein 88 2e-17
>Os08g0389700 Protein of unknown function DUF81 family protein
Length = 465
Score = 690 bits (1781), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/465 (75%), Positives = 351/465 (75%)
Query: 1 MGRRWHXXXXXXXXXXXXXXXXXGDRGFTFADAVAAPEEVGYMRKVVNFLWSGEASYHHV 60
MGRRWH GDRGFTFADAVAAPEEVGYMRKVVNFLWSGEASYHHV
Sbjct: 1 MGRRWHALAAVGVAACAAAAVAAGDRGFTFADAVAAPEEVGYMRKVVNFLWSGEASYHHV 60
Query: 61 WPPMEFGWKIVXXXXXXXXXXXXXXXXXXXXXXXXVPMLTLIIGFDAKSSTAISKCMIMG 120
WPPMEFGWKIV VPMLTLIIGFDAKSSTAISKCMIMG
Sbjct: 61 WPPMEFGWKIVLGILIGFFGAAFGSVGGVGGGGIFVPMLTLIIGFDAKSSTAISKCMIMG 120
Query: 121 AAVSTVYYNLKLKHPTLDMPVIDYDLALLIQPMLMLGISIGVLFNVIFPDWLITVLLIIL 180
AAVSTVYYNLKLKHPTLDMPVIDYDLALLIQPMLMLGISIGVLFNVIFPDWLITVLLIIL
Sbjct: 121 AAVSTVYYNLKLKHPTLDMPVIDYDLALLIQPMLMLGISIGVLFNVIFPDWLITVLLIIL 180
Query: 181 FLGTSTKAFLKGVETWKKETILKREAAKRLEQIAEEPEYSPLPTGPNATAESKAPSDEAA 240
FLGTSTKAFLKGVETWKKETILKREAAKRLEQIAEEPEYSPLPTGPNATAESKAPSDEAA
Sbjct: 181 FLGTSTKAFLKGVETWKKETILKREAAKRLEQIAEEPEYSPLPTGPNATAESKAPSDEAA 240
Query: 241 SLWQNVYWKEFGLLAFVWIAFLVLQVTKNYMPTCSTWYWVLNFLQIPVSVGVTMYEGLGL 300
SLWQNVYWKEFGLLAFVWIAFLVLQVTKNYMPTCSTWYWVLNFLQIPVSVGVTMYEGLGL
Sbjct: 241 SLWQNVYWKEFGLLAFVWIAFLVLQVTKNYMPTCSTWYWVLNFLQIPVSVGVTMYEGLGL 300
Query: 301 MQGRRVISSKGDEQTNLKFHQLLVYCXXXXXXXXXXXXXXXXXXXXXXXXXXELGIPPQV 360
MQGRRVISSKGDEQTNLKFHQLLVYC ELGIPPQV
Sbjct: 301 MQGRRVISSKGDEQTNLKFHQLLVYCFFGMMAGVVGGLLGLGGGFIMGPLFLELGIPPQV 360
Query: 361 XXXXXXXXXXXXXXXXVVEYYLLDRFPVPYXXXXXXXXXXXXIIGQHIVRKLINWLGRXX 420
VVEYYLLDRFPVPY IIGQHIVRKLINWLGR
Sbjct: 361 SSATATFAMMFSSSMSVVEYYLLDRFPVPYALFFTVVAFFAAIIGQHIVRKLINWLGRAS 420
Query: 421 XXXXXXXXXXXXXXXXXGGVGISNMIGKIARHEYMGFDNICNYDV 465
GGVGISNMIGKIARHEYMGFDNICNYDV
Sbjct: 421 LIIFILSFMIFISAISLGGVGISNMIGKIARHEYMGFDNICNYDV 465
>Os09g0344800 Protein of unknown function DUF81 family protein
Length = 481
Score = 565 bits (1456), Expect = e-161, Method: Compositional matrix adjust.
Identities = 281/429 (65%), Positives = 308/429 (71%), Gaps = 1/429 (0%)
Query: 37 PEEVGYMRKVVNFLWSGEA-SYHHVWPPMEFGWKIVXXXXXXXXXXXXXXXXXXXXXXXX 95
PEEVG +RKV NFLW + SYHHVWP ME GW+IV
Sbjct: 52 PEEVGILRKVANFLWQTDGNSYHHVWPEMELGWQIVLGSLIGFFGAAFGSVGGVGGGGIF 111
Query: 96 VPMLTLIIGFDAKSSTAISKCMIMGAAVSTVYYNLKLKHPTLDMPVIDYDLALLIQPMLM 155
VPMLTLIIGFD KSSTAISKCMIMGAAVSTVYYNLKLKHPTLDMPVIDYDLALLIQPMLM
Sbjct: 112 VPMLTLIIGFDPKSSTAISKCMIMGAAVSTVYYNLKLKHPTLDMPVIDYDLALLIQPMLM 171
Query: 156 LGISIGVLFNVIFPDWLITVLLIILFLGTSTKAFLKGVETWKKETILKREAAKRLEQIAE 215
LGISIGV+FNV+FPDWL+TVLLIILFLGTSTKAFLKGVETWKKETI+KREAAKRLEQ +E
Sbjct: 172 LGISIGVIFNVLFPDWLVTVLLIILFLGTSTKAFLKGVETWKKETIIKREAAKRLEQTSE 231
Query: 216 EPEYSPLPTGPNATAESKAPSDEAASLWQNVYWKEFGLLAFVWIAFLVLQVTKNYMPTCS 275
EPEY+PLPTGP A A++K PSDEAASL +N+YWKEFGLLAFVW+AFLVLQVTKNY TCS
Sbjct: 232 EPEYAPLPTGPGAVADAKRPSDEAASLMKNIYWKEFGLLAFVWMAFLVLQVTKNYTATCS 291
Query: 276 TWYWVLNFLQIPVSVGVTMYEGLGLMQGRRVISSKGDEQTNLKFHQLLVYCXXXXXXXXX 335
+WYW+LN LQIPVSVGVTMYE LGLM G+RV+SSKG+EQT LKFHQL +YC
Sbjct: 292 SWYWILNLLQIPVSVGVTMYEALGLMSGKRVLSSKGNEQTTLKFHQLCIYCFFGITAGVV 351
Query: 336 XXXXXXXXXXXXXXXXXELGIPPQVXXXXXXXXXXXXXXXXVVEYYLLDRFPVPYXXXXX 395
ELGIPPQV VVEYYLL+RFPVPY
Sbjct: 352 GGLLGLGGGFIMGPLFLELGIPPQVSSATATFAMMFSSSMSVVEYYLLNRFPVPYALYFV 411
Query: 396 XXXXXXXIIGQHIVRKLINWLGRXXXXXXXXXXXXXXXXXXXGGVGISNMIGKIARHEYM 455
IIGQH+VR+LINWLGR GGVGISNMI +I +HEYM
Sbjct: 412 IVAFIAAIIGQHVVRRLINWLGRASLIIFILAFMIFVSAISLGGVGISNMIHRINQHEYM 471
Query: 456 GFDNICNYD 464
GF+N+C YD
Sbjct: 472 GFENLCKYD 480
>Os08g0387200 Protein of unknown function DUF81 family protein
Length = 469
Score = 534 bits (1375), Expect = e-152, Method: Compositional matrix adjust.
Identities = 272/425 (64%), Positives = 295/425 (69%), Gaps = 7/425 (1%)
Query: 42 YMRKVVNFLW--SGEASYHHVWPPMEFGWKIVXXXXXXXXXXXXXXXXXXXXXXXXVPML 99
++RKV NFLW GE SYHHVWPPMEFGW+IV +PML
Sbjct: 49 HLRKVANFLWRSGGENSYHHVWPPMEFGWQIVLGSFVGFIGAAFGSIGGVGGGGFFMPML 108
Query: 100 TLIIGFDAKSSTAISKCMIMGAAVSTVYYNLKLKHPTLDMPVIDYDLALLIQPMLMLGIS 159
TLIIGFDAKSS AISKCMIMGAAVSTVY NLK KHPTLDMPVIDYDLALLIQPMLMLGIS
Sbjct: 109 TLIIGFDAKSSVAISKCMIMGAAVSTVYCNLKRKHPTLDMPVIDYDLALLIQPMLMLGIS 168
Query: 160 IGVLFNVIFPDWLITVLLIILFLGTSTKAFLKGVETWKKETILKREAAKRLEQIAEEPEY 219
IGV+FNVIFPDWL+TVLLIILFLGTSTKAFLKG+ETWKKETI+KREA KR EQ +EE EY
Sbjct: 169 IGVIFNVIFPDWLVTVLLIILFLGTSTKAFLKGIETWKKETIIKREAEKRSEQTSEELEY 228
Query: 220 SPLPTGPNATAESKAPSDEAASLWQNVYWKEFGLLAFVWIAFLVLQVTKNYMPTCSTWYW 279
P+P +ESK PSDEA S+ NVYWKEFGLLAFVWIAFL LQVTKNYMPTCSTWYW
Sbjct: 229 RPVP-----ASESKPPSDEAVSILHNVYWKEFGLLAFVWIAFLALQVTKNYMPTCSTWYW 283
Query: 280 VLNFLQIPVSVGVTMYEGLGLMQGRRVISSKGDEQTNLKFHQLLVYCXXXXXXXXXXXXX 339
VLN LQIPVSVGVTMYEGLGLMQGRRVISS G+EQTNLKFHQLL+YC
Sbjct: 284 VLNLLQIPVSVGVTMYEGLGLMQGRRVISSNGNEQTNLKFHQLLMYCFFGITAGIVAGLL 343
Query: 340 XXXXXXXXXXXXXELGIPPQVXXXXXXXXXXXXXXXXVVEYYLLDRFPVPYXXXXXXXXX 399
+LG+PPQV VEYY LDRFPVPY
Sbjct: 344 GVGGGSILGPMFLDLGVPPQVASATATFSMMFSASMSAVEYYFLDRFPVPYALYLTVVAF 403
Query: 400 XXXIIGQHIVRKLINWLGRXXXXXXXXXXXXXXXXXXXGGVGISNMIGKIARHEYMGFDN 459
I+GQ +VRK+INWLGR GG+GI N IGKI RHEYMGF++
Sbjct: 404 FSAIVGQRMVRKVINWLGRASIIIFTLSIMIFLSTIPLGGIGIVNWIGKIERHEYMGFED 463
Query: 460 ICNYD 464
IC +D
Sbjct: 464 ICKFD 468
>Os03g0726500 Conserved hypothetical protein
Length = 475
Score = 261 bits (666), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 150/415 (36%), Positives = 207/415 (49%), Gaps = 11/415 (2%)
Query: 59 HVWPPMEFGWKIVXXXXXXXXXXXXXXXXXXXXXXXXVPMLTLIIGFDAKSSTAISKCMI 118
VWP + F W++V VPML L++GFD KS+ A+SKCMI
Sbjct: 60 RVWPDLAFNWRVVVATVVGFLGSAFGTVGGVGGGGIFVPMLNLLVGFDTKSAAALSKCMI 119
Query: 119 MGAAVSTVYYNLKLKHPTLDMPVIDYDLALLIQPMLMLGISIGVLFNVIFPDWLITVLLI 178
MGA+ S+V+YNL++ HPT + PVIDY LALL QPMLMLGI+IGV +VIFP WLITVL+I
Sbjct: 120 MGASASSVWYNLQVSHPTKEAPVIDYKLALLFQPMLMLGITIGVELSVIFPYWLITVLII 179
Query: 179 ILFLGTSTKAFLKGVETWKKETILKREAAKRLEQIAEEPEYSPLPTGPNATAE---SKAP 235
ILF+GTS+++F KG+ WK ET ++ E +R E+ + P+ P
Sbjct: 180 ILFIGTSSRSFYKGILMWKDETRIQMETREREEESKSSCAARDVVIDPSCEEPLLCQPQP 239
Query: 236 SDEAA--SLWQNVYWKEFGLLAFVWIAFLVLQVTKNYMPTCSTWYWVLNFLQIPVSVGVT 293
+++A + N+ WK +L VW +FLVLQ+ KN +CST+YWV+N LQ+PV++ V
Sbjct: 240 KEKSALETFLFNLRWKNILVLMTVWSSFLVLQIFKNNSQSCSTFYWVINILQVPVALSVF 299
Query: 294 MYEGLGLMQGRRVISSKGDEQTNLKFH------QLLVYCXXXXXXXXXXXXXXXXXXXXX 347
++EG+ L + R G+ + + QL+
Sbjct: 300 LWEGVQLCRESRARRMDGNWECVCEASIEWSPAQLIFCAFCGLLGGTVGGLLGSGGGFIL 359
Query: 348 XXXXXELGIPPQVXXXXXXXXXXXXXXXXVVEYYLLDRFPVPYXXXXXXXXXXXXIIGQH 407
ELG PQV VVE+Y L+RFP+P+ GQ
Sbjct: 360 GPLLLELGCIPQVASATATFVMMFSSSLSVVEFYFLNRFPIPFAVYLICISILAGFWGQS 419
Query: 408 IVRKLINWLGRXXXXXXXXXXXXXXXXXXXGGVGISNMIGKIARHEYMGFDNICN 462
+VRKL++ L R G VG I I HEYMGF + C
Sbjct: 420 LVRKLVHVLKRASLIVFILSSVIFASALTMGVVGTQKSISMINNHEYMGFLDFCE 474
>AK109633
Length = 417
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 54/71 (76%), Positives = 54/71 (76%)
Query: 1 MGRRWHXXXXXXXXXXXXXXXXXGDRGFTFADAVAAPEEVGYMRKVVNFLWSGEASYHHV 60
MGRRWH GDRGFTFADAVAAPEEVGYMRKVVNFLWSGEASYHHV
Sbjct: 1 MGRRWHALAAVGVAACAAAAVAAGDRGFTFADAVAAPEEVGYMRKVVNFLWSGEASYHHV 60
Query: 61 WPPMEFGWKIV 71
WPPMEFGWKIV
Sbjct: 61 WPPMEFGWKIV 71
>Os01g0786700 Conserved hypothetical protein
Length = 300
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 72/120 (60%), Gaps = 7/120 (5%)
Query: 96 VPMLTLIIGFDAKSSTAISKCMIMGAAVSTVYYNL---KLKHPTLDMPVIDYDLALLIQP 152
VP+L ++ G K++TA S M+ G +S V Y L + P+IDYD+A++ QP
Sbjct: 31 VPILNIVAGLSLKTATAFSTFMVTGGTLSNVLYTLIVLRGHEKGGHQPLIDYDIAVVSQP 90
Query: 153 MLMLGISIGVLFNVIFPDWLITVLLIILFLGTSTKAFLKGVETWKKETILKREAAKRLEQ 212
L+LG+S+GV+ NV+FP+WLIT L + + K + G++ W+ ET AA+R+ +
Sbjct: 91 CLLLGVSVGVICNVMFPEWLITALFAVFLASATFKTYGTGMKRWRAET----AAARRMLE 146
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.324 0.141 0.449
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 11,865,011
Number of extensions: 394159
Number of successful extensions: 1283
Number of sequences better than 1.0e-10: 6
Number of HSP's gapped: 1264
Number of HSP's successfully gapped: 6
Length of query: 465
Length of database: 17,035,801
Length adjustment: 104
Effective length of query: 361
Effective length of database: 11,605,545
Effective search space: 4189601745
Effective search space used: 4189601745
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 158 (65.5 bits)