Os08g0387200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF81 family protein.
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Os08g0387200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF81 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 198.04 | 0.661 | 4.88 | -0.0782 | 1.39 | 1.1 | -0.329 | 0.0613 | 0.116 | 9.77 | 21.41 | 1387 | -- | -- |
| 197.75 | 0.655 | 4.87 | -0.0857 | 1.4 | 1.1 | -0.3 | -- | 0.125 | 9.81 | 22.19 | 1347 | -- | -- |
| 197.9 | 0.655 | 4.9 | -0.289 | 1.41 | 1.15 | -- | -0.683 | 0.0977 | 9.87 | 22.66 | 1328 | -- | -- |
| 198.09 | 0.656 | 4.88 | -0.0958 | 1.41 | 1.1 | -- | -- | 0.124 | 9.84 | 22.2 | 1336 | -- | -- |
| 311.23 | 0.822 | 4.93 | -0.235 | -- | 1.03 | -- | -0.454 | 0.0953 | -- | 22.42 | 1478 | -- | -- |
| 240.42 | 0.727 | 4.82 | 0.302 | 1.35 | -- | -0.391 | -- | 0.368 | 9.47 | -- | -- | -- | -- |
| 240.98 | 0.727 | 4.82 | 0.288 | 1.36 | -- | -- | -- | 0.368 | 9.48 | -- | -- | -- | -- |
| 311.14 | 0.822 | 4.91 | -0.0938 | -- | 1.02 | -- | -- | 0.133 | -- | 21.88 | 1481 | -- | -- |
| 198.31 | 0.656 | 4.87 | -- | 1.41 | 1.08 | -- | -- | 0.139 | 9.84 | 22.24 | 1336 | -- | -- |
| 349.02 | 0.873 | 4.86 | 0.279 | -- | -- | -- | -- | 0.372 | -- | -- | -- | -- | -- |
| 243.17 | 0.729 | 4.83 | -- | 1.36 | -- | -- | -- | 0.336 | 9.46 | -- | -- | -- | -- |
| 311.35 | 0.822 | 4.91 | -- | -- | 0.992 | -- | -- | 0.149 | -- | 21.97 | 1480 | -- | -- |
| 351.07 | 0.875 | 4.87 | -- | -- | -- | -- | -- | 0.341 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 193.89 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 1 |
| 3 | 195.31 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 8 |
| 7 | 195.63 | radiation | 40 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 25 | 195.67 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 4 |
| 47 | 195.92 | temperature | 20 | 1440 | > th | dose dependent | rect. | 13 | 16 |
| 84 | 196.26 | temperature | 20 | 1440 | > th | dose dependent | sin | 16 | NA |
| 95 | 196.41 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 129 | 196.74 | temperature | 10 | 1440 | > th | dose dependent | rect. | 15 | 8 |
| 156 | 196.94 | temperature | 25 | 1440 | < th | dose independent | rect. | 13 | 10 |
| 160 | 196.96 | temperature | 25 | 1440 | > th | dose independent | rect. | 13 | 10 |
| 161 | 196.98 | temperature | 25 | 1440 | < th | dose independent | rect. | 15 | 8 |
| 197 | 197.22 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 270 | 197.60 | wind | 5 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 351 | 198.03 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 6 |
| 433 | 198.44 | radiation | 40 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 505 | 198.69 | temperature | 30 | 1440 | < th | dose dependent | rect. | 19 | 1 |
| 581 | 198.99 | temperature | 25 | 1440 | > th | dose dependent | rect. | 3 | 20 |
| 606 | 199.05 | temperature | 25 | 1440 | < th | dose independent | rect. | 20 | 2 |
| 716 | 199.40 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 723 | 199.43 | temperature | 25 | 1440 | > th | dose independent | rect. | 20 | 2 |
| 804 | 199.59 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 23 |
| 808 | 199.60 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 23 |
| 812 | 199.61 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 23 |
| 829 | 199.67 | temperature | 30 | 1440 | < th | dose dependent | sin | 16 | NA |
| 838 | 199.69 | wind | 7 | 43200 | < th | dose independent | rect. | 13 | 2 |
| 856 | 199.74 | wind | 7 | 43200 | > th | dose independent | rect. | 13 | 2 |
| 863 | 199.76 | wind | 5 | 43200 | > th | dose dependent | rect. | 12 | 3 |
| 992 | 200.18 | temperature | 25 | 1440 | < th | dose independent | rect. | 19 | 4 |