BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0387200 Os08g0387200|AK120787
(469 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G25737.1 | chr2:10977174-10979677 FORWARD LENGTH=477 484 e-137
AT2G36630.1 | chr2:15352767-15355050 REVERSE LENGTH=460 290 1e-78
AT1G11540.1 | chr1:3875476-3876973 REVERSE LENGTH=368 142 6e-34
AT1G61740.1 | chr1:22798365-22801020 REVERSE LENGTH=459 134 1e-31
AT4G21250.1 | chr4:11325030-11326637 FORWARD LENGTH=450 128 7e-30
AT4G21260.1 | chr4:11327543-11329057 FORWARD LENGTH=394 113 2e-25
>AT2G25737.1 | chr2:10977174-10979677 FORWARD LENGTH=477
Length = 476
Score = 484 bits (1246), Expect = e-137, Method: Compositional matrix adjust.
Identities = 249/428 (58%), Positives = 291/428 (67%), Gaps = 7/428 (1%)
Query: 48 SHLRKVANFLWRSGGENSYHHVWPPMEFGWQIVLXXXXXXXXXXXXXXXXXXXXXXXMPM 107
S K NFLW S + Y HVWP EF WQIVL +PM
Sbjct: 50 SFFLKAINFLWESD-QIGYRHVWPEFEFNWQIVLGTLVGFFGAAFGSVGGVGGGGIFVPM 108
Query: 108 LTLIIGFDAKSSVAISKCMIMGAAVSTVYCNLKRKHPTLDMPVIDYDLALLIQPMLMLGI 167
L+LIIGFD KS+ AISKCMIMGA+VSTVY NL+ +HPTLDMP+IDYDLALLIQPMLMLGI
Sbjct: 109 LSLIIGFDPKSATAISKCMIMGASVSTVYYNLRLRHPTLDMPIIDYDLALLIQPMLMLGI 168
Query: 168 SIGVIFNVIFPDWLVTVLLIILFLGTSTKAFLKGIETWKKETIIKREAEKRSEQ---TSE 224
SIGV FNVIFPDWLVTVLLI+LFLGTSTKAFLKG ETW KETI K+EA KR E +
Sbjct: 169 SIGVAFNVIFPDWLVTVLLIVLFLGTSTKAFLKGSETWNKETIEKKEAAKRLESNGVSGT 228
Query: 225 ELEYRPVPASESKPPSD---EAVSILHNVYWKEFGLLAFVWIAFLALQVTKNYMPTCSTW 281
E+EY P+PA+ S P + E VSI+ NVYWKE GLL FVWI FLALQ++K + CS
Sbjct: 229 EVEYVPLPAAPSTNPGNKKKEEVSIIENVYWKELGLLVFVWIVFLALQISKQNLANCSVA 288
Query: 282 YWVLNLLQIPVSVGVTMYEGLGLMQGRRVISSNGNEQTNLKFHQLLMYCFFGITXXXXXX 341
YWV+NLLQIPV+VGV+ YE + L QGRR+I+S G +N QL+MYC FGI
Sbjct: 289 YWVINLLQIPVAVGVSGYEAVALYQGRRIIASKGQGDSNFTVGQLVMYCTFGIIAGIVGG 348
Query: 342 XXXXXXXXXXXPMFLDLGVPPQVXXXXXXXXXXXXXXXXXVEYYFLDRFPVPYALYLTVV 401
P+FL+LGVPPQV VEYY L RFPVPYALYL V
Sbjct: 349 LLGLGGGFIMGPLFLELGVPPQVSSATATFAMTFSSSMSVVEYYLLKRFPVPYALYLVGV 408
Query: 402 AFFSAIVGQRMVRKVINWLGRASIIIFTLSIMIFLSTIPLGGIGIVNWIGKIERHEYMGF 461
A +A VGQ +VR++I +GRAS+IIF L+ MIF+S I LGG+GIVN IGKI+RHEYMGF
Sbjct: 409 ATIAAWVGQHVVRRLIAAIGRASLIIFILASMIFISAISLGGVGIVNMIGKIQRHEYMGF 468
Query: 462 EDICKFDA 469
E++CK+
Sbjct: 469 ENLCKYGG 476
>AT2G36630.1 | chr2:15352767-15355050 REVERSE LENGTH=460
Length = 459
Score = 290 bits (742), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 161/416 (38%), Positives = 239/416 (57%), Gaps = 16/416 (3%)
Query: 64 NSYHHVWPPMEFGWQIVLXXXXXXXXXXXXXXXXXXXXXXXMPMLTLIIGFDAKSSVAIS 123
++ +WP ++F W++VL +PMLTLI+GFD KS+ AIS
Sbjct: 45 SATEKIWPDLKFSWKLVLATVIAFLGSACGTVGGVGGGGIFVPMLTLILGFDTKSAAAIS 104
Query: 124 KCMIMGAAVSTVYCNLKRKHPTLDMPVIDYDLALLIQPMLMLGISIGVIFNVIFPDWLVT 183
KCMIMGA+ S+V+ N++ +HPT ++P++DYDLALL QPML+LGI++GV +V+FP WL+T
Sbjct: 105 KCMIMGASASSVWYNVRVRHPTKEVPILDYDLALLFQPMLLLGITVGVSLSVVFPYWLIT 164
Query: 184 VLLIILFLGTSTKAFLKGIETWKKETIIKRE-AEKRSEQTSE------ELEYRPVPASES 236
VL+IILF+GTS+++F KGIE WK+ET++K E A++R+ + + EY P+ E
Sbjct: 165 VLIIILFVGTSSRSFFKGIEMWKEETLLKNEMAQQRANMVNSRGELLIDTEYEPLYPREE 224
Query: 237 KPPSDEAVSILHNVYWKEFGLLAFVWIAFLALQVTKNYMPTCSTWYWVLNLLQIPVSVGV 296
K E I N+ WK +L VW+ FL +Q+ KN + CST YW+L ++Q PV++ V
Sbjct: 225 K---SELEIIRSNLKWKGLLILVTVWLTFLLIQIVKNEIKVCSTIYWILFIVQFPVALAV 281
Query: 297 TMYEGLGLMQGRRVISSNGNE----QTNLKFHQL-LMYC-FFGITXXXXXXXXXXXXXXX 350
+E L + ++GN + +++ L L++C G+
Sbjct: 282 FGFEASKLYTANKKRLNSGNTECICEATIEWTPLSLIFCGLCGLIGGIVGGLLGSGGGFV 341
Query: 351 XXPMFLDLGVPPQVXXXXXXXXXXXXXXXXXVEYYFLDRFPVPYALYLTVVAFFSAIVGQ 410
P+ L++GV PQV VE+Y L RFP+PYA+YL V+ + GQ
Sbjct: 342 LGPLLLEIGVIPQVASATATFVMMFSSSLSVVEFYLLKRFPIPYAMYLISVSILAGFWGQ 401
Query: 411 RMVRKVINWLGRASIIIFTLSIMIFLSTIPLGGIGIVNWIGKIERHEYMGFEDICK 466
+RK++ L RASII+F LS +I S + +G IGI I I HE+MGF C
Sbjct: 402 SFIRKLVAILRRASIIVFVLSGVICASALTMGVIGIEKSIKMIHNHEFMGFLGFCS 457
>AT1G11540.1 | chr1:3875476-3876973 REVERSE LENGTH=368
Length = 367
Score = 142 bits (357), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 172/371 (46%), Gaps = 17/371 (4%)
Query: 108 LTLIIGFDAKSSVAISKCMIMGAAVSTVYCNLKRKHP-TLDMPVIDYDLALLIQPMLMLG 166
+T+I G + K++ + S M+ G + + V CNL ++P + D +ID+DLAL IQP L+LG
Sbjct: 1 MTIIAGLEMKTASSFSAFMVTGVSFANVGCNLFLRNPKSRDKTLIDFDLALTIQPCLLLG 60
Query: 167 ISIGVIFNVIFPDWLVTVLLIILFLGTSTKAFLKGIETWKKETIIKREAEKRSEQTSEEL 226
+SIGVI N +FP+WLV L + ++ K KG+ W E+ A+ +S + + +
Sbjct: 61 VSIGVICNRMFPNWLVLFLFAVFLAWSTMKTCKKGVSYWNLES---ERAKIKSPRDVDGI 117
Query: 227 EYRPVPASESKPPSDEAVSILHNVYWKEFGLLAFVWIAFLALQVTKN--------YMPTC 278
E P S+ D + W + G+L +W+ F ++ + + + C
Sbjct: 118 EVARSPL-LSEEREDVRQRGMIRFPWMKLGVLVIIWLLFFSINLFRGNKYGQGIISIKPC 176
Query: 279 STWYWVLNLLQIPVSVGVTM--YEGLGLMQGRRVISSNGNEQ-TNLKFHQ-LLMYCFFGI 334
YW L+ LQIP+++ T+ Y + S+ +EQ T + Q LM +
Sbjct: 177 GALYWFLSSLQIPLTIFFTLCIYFSDNVQSNHTSHSNQNSEQETGVGGRQNKLMLPVMAL 236
Query: 335 TXXXXXXXXXXXXXXXXXPMFLDLGVPPQVXXXXXXXXXXXXXXXXXVEYYFLDRFPVPY 394
P+ L +G+ P+V ++Y L
Sbjct: 237 LAGVLGGLFGIGGGMLISPLLLQIGIAPEVTAATCSFMVLFSSSMSAIQYLLLGMEHAGT 296
Query: 395 ALYLTVVAFFSAIVGQRMVRKVINWLGRASIIIFTLSIMIFLSTIPLGGIGIVNWIGKIE 454
A +V F +++VG +V+KVI GRASII+F + I++ LST+ + G N
Sbjct: 297 AAIFALVCFVASLVGLMVVKKVIAKYGRASIIVFAVGIVMALSTVLMTTHGAFNVWNDFV 356
Query: 455 RHEYMGFEDIC 465
YMGF+ C
Sbjct: 357 SGRYMGFKLPC 367
>AT1G61740.1 | chr1:22798365-22801020 REVERSE LENGTH=459
Length = 458
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 96/387 (24%), Positives = 173/387 (44%), Gaps = 39/387 (10%)
Query: 105 MPMLTLIIGFDAKSSVAISKCMIMGAAVSTVYCNLKRKHP-TLDMPVIDYDLALLIQPML 163
+P++T++ G D K++ + S M+ G +++ V CNL ++P + +ID+DLALL++P +
Sbjct: 85 VPIMTIVAGLDLKTASSFSAFMVTGGSIANVGCNLFVRNPKSGGKTLIDFDLALLLEPCM 144
Query: 164 MLGISIGVIFNVIFPDWLVTVLLIILFLGTSTKAFLKGIETWKKETIIKREAEKRSEQTS 223
+LG+SIGVI N++FP+WL+T L + ++ K F G+ W+ E+ E K E
Sbjct: 145 LLGVSIGVICNLVFPNWLITSLFAVFLAWSTLKTFGNGLYYWRLES----EMVKIRESNR 200
Query: 224 EELEYRPVPASESKPPSDEAVSILHNVYWKEFGLLAFVWIAFLALQVTKN--------YM 275
E + K P E W + G+L +W+++ A+ + + +
Sbjct: 201 IEEDDEEDKIESLKLPLLEDYQRPKRFPWIKLGVLVIIWLSYFAVYLLRGNKYGEGIISI 260
Query: 276 PTCSTWYWVLNLLQIPVSVGVTMYEGLGLMQGRRVISSNGNEQTNLKFH----------- 324
C YW+++ QIP+++ T++ S N Q +H
Sbjct: 261 EPCGNAYWLISSSQIPLTLFFTLW---------ICFSDNVQSQQQSDYHVSVKDVEDLRS 311
Query: 325 ------QLLMYCFFGITXXXXXXXXXXXXXXXXXPMFLDLGVPPQVXXXXXXXXXXXXXX 378
M+ + P+ L +G+ P+V
Sbjct: 312 NDGARSNKCMFPVMALLAGVLGGVFGIGGGMLISPLLLQVGIAPEVTAATCSFMVLFSST 371
Query: 379 XXXVEYYFLDRFPVPYALYLTVVAFFSAIVGQRMVRKVINWLGRASIIIFTLSIMIFLST 438
++Y L A V+ F +++VG ++V+KVI GRASII+F++ I++ LS
Sbjct: 372 MSAIQYLLLGMEHTGTASIFAVICFVASLVGLKVVQKVITEYGRASIIVFSVGIVMALSI 431
Query: 439 IPLGGIGIVNWIGKIERHEYMGFEDIC 465
+ + G ++ YMGF+ C
Sbjct: 432 VLMTSYGALDVWNDYVSGRYMGFKLPC 458
>AT4G21250.1 | chr4:11325030-11326637 FORWARD LENGTH=450
Length = 449
Score = 128 bits (321), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 101/378 (26%), Positives = 175/378 (46%), Gaps = 29/378 (7%)
Query: 105 MPMLTLIIGFDAKSSVAISKCMIMGAAVSTVYCNLKRKHPTLDMPVIDYDLALLIQPMLM 164
+P++T++ G D K++ + S M+ G +++ V NL +DYDLALL++P ++
Sbjct: 84 IPIMTIVAGVDLKTASSFSAFMVTGGSIANVISNLFGGKAL-----LDYDLALLLEPCML 138
Query: 165 LGISIGVIFNVIFPDWLVTVLLIILFLGTSTKAFLKGIETWKKETIIKREA-----EKRS 219
LG+SIGVI N + P+WL+TVL + +S K G++ WK E+ I RE+ E+
Sbjct: 139 LGVSIGVICNRVLPEWLITVLFAVFLAWSSLKTCRSGVKFWKLESEIARESGHGRPERGQ 198
Query: 220 EQTSEELEYRPVPASESKPPSDEAVSILHNVYWKEFGLLAFVWIAFLALQVTKN------ 273
Q EE + P E++ +++ + W + G+L VW +F + + +
Sbjct: 199 GQIEEETKNLKAPLLEAQATKNKS-----KIPWTKLGVLVIVWASFFVIYLLRGNKDGKG 253
Query: 274 --YMPTCSTWYWVLNLLQIPVSVGVTMYEGLGLMQGRRVISSN---GNEQTNLKFHQLLM 328
+ C YW+L LQIP+++ T L + R+ S N E T L L
Sbjct: 254 IITIKPCGVEYWILLSLQIPLALIFTKL-ALSRTESRQEQSPNDQKNQEGTRLDKSTRLK 312
Query: 329 YCFFGITXXXXXXXXXXXXXXXXXPMFLDLGVPPQVXXXXXXXXXXXXXXXXXVEYYFLD 388
+ P+ L G+PPQ+ V+Y L
Sbjct: 313 FPAMSFLAGLLGGIFGIGGGMLISPLLLQSGIPPQITAATTSFMVFFSATMSAVQYLLLG 372
Query: 389 RFPVPYALYLTVVAFFSAIVGQRMVRKVINWLGRASIIIFTLSIMIFLSTIPLGGIGIVN 448
A + + F ++++G +V+K + GRASII+F++ ++ LST+ + G ++
Sbjct: 373 MQNTDTAYVFSFICFLASLLGLVLVQKAVAQFGRASIIVFSVGTVMSLSTVLMTSFGALD 432
Query: 449 -WIGKIERHEYMGFEDIC 465
W + + MGF+ C
Sbjct: 433 VWTDYVAGKD-MGFKLPC 449
>AT4G21260.1 | chr4:11327543-11329057 FORWARD LENGTH=394
Length = 393
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/353 (24%), Positives = 154/353 (43%), Gaps = 39/353 (11%)
Query: 113 GFDAKSSVAISKCMIMGAAVSTVYCNLKRKHPTLDMPVIDYDLALLIQPMLMLGISIGVI 172
G D K++ + S M+ G +++ NL H +IDYDLALL++P ++LG+S+GVI
Sbjct: 80 GIDLKAASSFSAFMVTGGSIA----NLINNHFGCK-KLIDYDLALLLEPCMLLGVSVGVI 134
Query: 173 FNVIFPDWLVTVLLIILFLGTSTKAFLKGIETWKKETIIKREAEKRSEQTSEELEYRPVP 232
N +FP+WL+T L ++ + +S + G +WK I++ + + R + +E R +
Sbjct: 135 CNKVFPEWLITGLFVVFLMWSSMETCENGHTSWKLSLILREKEDMRDSRLAEVKRRRTII 194
Query: 233 ASESKPPSDEAVSILHNVYWKEFGLLAFVWIAFLALQVTKNYMPTCSTWYWVLNLLQIPV 292
+ + + + G+++ + CS YW+L LQIP+
Sbjct: 195 FFKHLYLKIKKTETKQSFLGRNLGIIS---------------IKPCSVEYWILLSLQIPL 239
Query: 293 SVGVTMYEGLGLMQGRRVISSNGNEQTNLKFHQLLMYCFFGITXXXXXXXXXXXXXXXXX 352
++ T+ L L + + + + Q
Sbjct: 240 ALVFTI---LALSRTESLQEQSISNQ----------------EAGLLGGIFGIGGGMIIS 280
Query: 353 PMFLDLGVPPQVXXXXXXXXXXXXXXXXXVEYYFLDRFPVPYALYLTVVAFFSAIVGQRM 412
P+ L G+PPQV V+Y L A +V+ FF++ +G
Sbjct: 281 PLLLRAGIPPQVTAATTSFMVFFSATMSGVQYLLLGMQNTEAAYVFSVICFFASTLGLVF 340
Query: 413 VRKVINWLGRASIIIFTLSIMIFLSTIPLGGIGIVNWIGKIERHEYMGFEDIC 465
+KV+ RASII+F + M++L+TI + GI+ + + + +GF+ C
Sbjct: 341 AQKVVPHFRRASIIVFLVGTMMYLTTIVMASFGILVFYIDNDAGKDIGFQLPC 393
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.327 0.142 0.455
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 8,206,819
Number of extensions: 287371
Number of successful extensions: 1041
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 1018
Number of HSP's successfully gapped: 8
Length of query: 469
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 367
Effective length of database: 8,310,137
Effective search space: 3049820279
Effective search space used: 3049820279
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 113 (48.1 bits)