BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0387200 Os08g0387200|AK120787
(469 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os08g0387200 Protein of unknown function DUF81 family protein 748 0.0
Os08g0389700 Protein of unknown function DUF81 family protein 604 e-173
Os09g0344800 Protein of unknown function DUF81 family protein 584 e-167
Os03g0726500 Conserved hypothetical protein 306 2e-83
Os01g0786700 Conserved hypothetical protein 83 4e-16
>Os08g0387200 Protein of unknown function DUF81 family protein
Length = 469
Score = 748 bits (1932), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/469 (80%), Positives = 378/469 (80%)
Query: 1 MGRKWHHXXXXXXXXXXXXXXXXXXXXXDRGLWSXXXXXXXXXXXXXSHLRKVANFLWRS 60
MGRKWHH DRGLWS SHLRKVANFLWRS
Sbjct: 1 MGRKWHHVAAALAVACAATAAATVAAAADRGLWSAAAAAVAEEGEEASHLRKVANFLWRS 60
Query: 61 GGENSYHHVWPPMEFGWQIVLXXXXXXXXXXXXXXXXXXXXXXXMPMLTLIIGFDAKSSV 120
GGENSYHHVWPPMEFGWQIVL MPMLTLIIGFDAKSSV
Sbjct: 61 GGENSYHHVWPPMEFGWQIVLGSFVGFIGAAFGSIGGVGGGGFFMPMLTLIIGFDAKSSV 120
Query: 121 AISKCMIMGAAVSTVYCNLKRKHPTLDMPVIDYDLALLIQPMLMLGISIGVIFNVIFPDW 180
AISKCMIMGAAVSTVYCNLKRKHPTLDMPVIDYDLALLIQPMLMLGISIGVIFNVIFPDW
Sbjct: 121 AISKCMIMGAAVSTVYCNLKRKHPTLDMPVIDYDLALLIQPMLMLGISIGVIFNVIFPDW 180
Query: 181 LVTVLLIILFLGTSTKAFLKGIETWKKETIIKREAEKRSEQTSEELEYRPVPASESKPPS 240
LVTVLLIILFLGTSTKAFLKGIETWKKETIIKREAEKRSEQTSEELEYRPVPASESKPPS
Sbjct: 181 LVTVLLIILFLGTSTKAFLKGIETWKKETIIKREAEKRSEQTSEELEYRPVPASESKPPS 240
Query: 241 DEAVSILHNVYWKEFGLLAFVWIAFLALQVTKNYMPTCSTWYWVLNLLQIPVSVGVTMYE 300
DEAVSILHNVYWKEFGLLAFVWIAFLALQVTKNYMPTCSTWYWVLNLLQIPVSVGVTMYE
Sbjct: 241 DEAVSILHNVYWKEFGLLAFVWIAFLALQVTKNYMPTCSTWYWVLNLLQIPVSVGVTMYE 300
Query: 301 GLGLMQGRRVISSNGNEQTNLKFHQLLMYCFFGITXXXXXXXXXXXXXXXXXPMFLDLGV 360
GLGLMQGRRVISSNGNEQTNLKFHQLLMYCFFGIT PMFLDLGV
Sbjct: 301 GLGLMQGRRVISSNGNEQTNLKFHQLLMYCFFGITAGIVAGLLGVGGGSILGPMFLDLGV 360
Query: 361 PPQVXXXXXXXXXXXXXXXXXVEYYFLDRFPVPYALYLTVVAFFSAIVGQRMVRKVINWL 420
PPQV VEYYFLDRFPVPYALYLTVVAFFSAIVGQRMVRKVINWL
Sbjct: 361 PPQVASATATFSMMFSASMSAVEYYFLDRFPVPYALYLTVVAFFSAIVGQRMVRKVINWL 420
Query: 421 GRASIIIFTLSIMIFLSTIPLGGIGIVNWIGKIERHEYMGFEDICKFDA 469
GRASIIIFTLSIMIFLSTIPLGGIGIVNWIGKIERHEYMGFEDICKFDA
Sbjct: 421 GRASIIIFTLSIMIFLSTIPLGGIGIVNWIGKIERHEYMGFEDICKFDA 469
>Os08g0389700 Protein of unknown function DUF81 family protein
Length = 465
Score = 604 bits (1557), Expect = e-173, Method: Compositional matrix adjust.
Identities = 301/425 (70%), Positives = 330/425 (77%), Gaps = 7/425 (1%)
Query: 49 HLRKVANFLWRSGGENSYHHVWPPMEFGWQIVLXXXXXXXXXXXXXXXXXXXXXXXMPML 108
++RKV NFLW GE SYHHVWPPMEFGW+IVL +PML
Sbjct: 42 YMRKVVNFLWS--GEASYHHVWPPMEFGWKIVLGILIGFFGAAFGSVGGVGGGGIFVPML 99
Query: 109 TLIIGFDAKSSVAISKCMIMGAAVSTVYCNLKRKHPTLDMPVIDYDLALLIQPMLMLGIS 168
TLIIGFDAKSS AISKCMIMGAAVSTVY NLK KHPTLDMPVIDYDLALLIQPMLMLGIS
Sbjct: 100 TLIIGFDAKSSTAISKCMIMGAAVSTVYYNLKLKHPTLDMPVIDYDLALLIQPMLMLGIS 159
Query: 169 IGVIFNVIFPDWLVTVLLIILFLGTSTKAFLKGIETWKKETIIKREAEKRSEQTSEELEY 228
IGV+FNVIFPDWL+TVLLIILFLGTSTKAFLKG+ETWKKETI+KREA KR EQ +EE EY
Sbjct: 160 IGVLFNVIFPDWLITVLLIILFLGTSTKAFLKGVETWKKETILKREAAKRLEQIAEEPEY 219
Query: 229 RPVP-----ASESKPPSDEAVSILHNVYWKEFGLLAFVWIAFLALQVTKNYMPTCSTWYW 283
P+P +ESK PSDEA S+ NVYWKEFGLLAFVWIAFL LQVTKNYMPTCSTWYW
Sbjct: 220 SPLPTGPNATAESKAPSDEAASLWQNVYWKEFGLLAFVWIAFLVLQVTKNYMPTCSTWYW 279
Query: 284 VLNLLQIPVSVGVTMYEGLGLMQGRRVISSNGNEQTNLKFHQLLMYCFFGITXXXXXXXX 343
VLN LQIPVSVGVTMYEGLGLMQGRRVISS G+EQTNLKFHQLL+YCFFG+
Sbjct: 280 VLNFLQIPVSVGVTMYEGLGLMQGRRVISSKGDEQTNLKFHQLLVYCFFGMMAGVVGGLL 339
Query: 344 XXXXXXXXXPMFLDLGVPPQVXXXXXXXXXXXXXXXXXVEYYFLDRFPVPYALYLTVVAF 403
P+FL+LG+PPQV VEYY LDRFPVPYAL+ TVVAF
Sbjct: 340 GLGGGFIMGPLFLELGIPPQVSSATATFAMMFSSSMSVVEYYLLDRFPVPYALFFTVVAF 399
Query: 404 FSAIVGQRMVRKVINWLGRASIIIFTLSIMIFLSTIPLGGIGIVNWIGKIERHEYMGFED 463
F+AI+GQ +VRK+INWLGRAS+IIF LS MIF+S I LGG+GI N IGKI RHEYMGF++
Sbjct: 400 FAAIIGQHIVRKLINWLGRASLIIFILSFMIFISAISLGGVGISNMIGKIARHEYMGFDN 459
Query: 464 ICKFD 468
IC +D
Sbjct: 460 ICNYD 464
>Os09g0344800 Protein of unknown function DUF81 family protein
Length = 481
Score = 584 bits (1505), Expect = e-167, Method: Compositional matrix adjust.
Identities = 289/425 (68%), Positives = 326/425 (76%), Gaps = 6/425 (1%)
Query: 50 LRKVANFLWRSGGENSYHHVWPPMEFGWQIVLXXXXXXXXXXXXXXXXXXXXXXXMPMLT 109
LRKVANFLW++ G NSYHHVWP ME GWQIVL +PMLT
Sbjct: 58 LRKVANFLWQTDG-NSYHHVWPEMELGWQIVLGSLIGFFGAAFGSVGGVGGGGIFVPMLT 116
Query: 110 LIIGFDAKSSVAISKCMIMGAAVSTVYCNLKRKHPTLDMPVIDYDLALLIQPMLMLGISI 169
LIIGFD KSS AISKCMIMGAAVSTVY NLK KHPTLDMPVIDYDLALLIQPMLMLGISI
Sbjct: 117 LIIGFDPKSSTAISKCMIMGAAVSTVYYNLKLKHPTLDMPVIDYDLALLIQPMLMLGISI 176
Query: 170 GVIFNVIFPDWLVTVLLIILFLGTSTKAFLKGIETWKKETIIKREAEKRSEQTSEELEYR 229
GVIFNV+FPDWLVTVLLIILFLGTSTKAFLKG+ETWKKETIIKREA KR EQTSEE EY
Sbjct: 177 GVIFNVLFPDWLVTVLLIILFLGTSTKAFLKGVETWKKETIIKREAAKRLEQTSEEPEYA 236
Query: 230 PVPA-----SESKPPSDEAVSILHNVYWKEFGLLAFVWIAFLALQVTKNYMPTCSTWYWV 284
P+P +++K PSDEA S++ N+YWKEFGLLAFVW+AFL LQVTKNY TCS+WYW+
Sbjct: 237 PLPTGPGAVADAKRPSDEAASLMKNIYWKEFGLLAFVWMAFLVLQVTKNYTATCSSWYWI 296
Query: 285 LNLLQIPVSVGVTMYEGLGLMQGRRVISSNGNEQTNLKFHQLLMYCFFGITXXXXXXXXX 344
LNLLQIPVSVGVTMYE LGLM G+RV+SS GNEQT LKFHQL +YCFFGIT
Sbjct: 297 LNLLQIPVSVGVTMYEALGLMSGKRVLSSKGNEQTTLKFHQLCIYCFFGITAGVVGGLLG 356
Query: 345 XXXXXXXXPMFLDLGVPPQVXXXXXXXXXXXXXXXXXVEYYFLDRFPVPYALYLTVVAFF 404
P+FL+LG+PPQV VEYY L+RFPVPYALY +VAF
Sbjct: 357 LGGGFIMGPLFLELGIPPQVSSATATFAMMFSSSMSVVEYYLLNRFPVPYALYFVIVAFI 416
Query: 405 SAIVGQRMVRKVINWLGRASIIIFTLSIMIFLSTIPLGGIGIVNWIGKIERHEYMGFEDI 464
+AI+GQ +VR++INWLGRAS+IIF L+ MIF+S I LGG+GI N I +I +HEYMGFE++
Sbjct: 417 AAIIGQHVVRRLINWLGRASLIIFILAFMIFVSAISLGGVGISNMIHRINQHEYMGFENL 476
Query: 465 CKFDA 469
CK+DA
Sbjct: 477 CKYDA 481
>Os03g0726500 Conserved hypothetical protein
Length = 475
Score = 306 bits (785), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 167/415 (40%), Positives = 238/415 (57%), Gaps = 16/415 (3%)
Query: 68 HVWPPMEFGWQIVLXXXXXXXXXXXXXXXXXXXXXXXMPMLTLIIGFDAKSSVAISKCMI 127
VWP + F W++V+ +PML L++GFD KS+ A+SKCMI
Sbjct: 60 RVWPDLAFNWRVVVATVVGFLGSAFGTVGGVGGGGIFVPMLNLLVGFDTKSAAALSKCMI 119
Query: 128 MGAAVSTVYCNLKRKHPTLDMPVIDYDLALLIQPMLMLGISIGVIFNVIFPDWLVTVLLI 187
MGA+ S+V+ NL+ HPT + PVIDY LALL QPMLMLGI+IGV +VIFP WL+TVL+I
Sbjct: 120 MGASASSVWYNLQVSHPTKEAPVIDYKLALLFQPMLMLGITIGVELSVIFPYWLITVLII 179
Query: 188 ILFLGTSTKAFLKGIETWKKETIIKREAEKRSEQTSEELEYRPV---PASES------KP 238
ILF+GTS+++F KGI WK ET I+ E +R E++ R V P+ E +P
Sbjct: 180 ILFIGTSSRSFYKGILMWKDETRIQMETREREEESKSSCAARDVVIDPSCEEPLLCQPQP 239
Query: 239 PSDEAV-SILHNVYWKEFGLLAFVWIAFLALQVTKNYMPTCSTWYWVLNLLQIPVSVGVT 297
A+ + L N+ WK +L VW +FL LQ+ KN +CST+YWV+N+LQ+PV++ V
Sbjct: 240 KEKSALETFLFNLRWKNILVLMTVWSSFLVLQIFKNNSQSCSTFYWVINILQVPVALSVF 299
Query: 298 MYEGLGLMQGRRVISSNGNEQTNLKFH------QLLMYCFFGITXXXXXXXXXXXXXXXX 351
++EG+ L + R +GN + + QL+ F G+
Sbjct: 300 LWEGVQLCRESRARRMDGNWECVCEASIEWSPAQLIFCAFCGLLGGTVGGLLGSGGGFIL 359
Query: 352 XPMFLDLGVPPQVXXXXXXXXXXXXXXXXXVEYYFLDRFPVPYALYLTVVAFFSAIVGQR 411
P+ L+LG PQV VE+YFL+RFP+P+A+YL ++ + GQ
Sbjct: 360 GPLLLELGCIPQVASATATFVMMFSSSLSVVEFYFLNRFPIPFAVYLICISILAGFWGQS 419
Query: 412 MVRKVINWLGRASIIIFTLSIMIFLSTIPLGGIGIVNWIGKIERHEYMGFEDICK 466
+VRK+++ L RAS+I+F LS +IF S + +G +G I I HEYMGF D C+
Sbjct: 420 LVRKLVHVLKRASLIVFILSSVIFASALTMGVVGTQKSISMINNHEYMGFLDFCE 474
>Os01g0786700 Conserved hypothetical protein
Length = 300
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 83/169 (49%), Gaps = 12/169 (7%)
Query: 105 MPMLTLIIGFDAKSSVAISKCMIMGAAVSTVYCNL--KRKHPTLD-MPVIDYDLALLIQP 161
+P+L ++ G K++ A S M+ G +S V L R H P+IDYD+A++ QP
Sbjct: 31 VPILNIVAGLSLKTATAFSTFMVTGGTLSNVLYTLIVLRGHEKGGHQPLIDYDIAVVSQP 90
Query: 162 MLMLGISIGVIFNVIFPDWLVTVLLIILFLGTSTKAFLKGIETWKKETIIKREAEKRSEQ 221
L+LG+S+GVI NV+FP+WL+T L + + K + G++ W+ ET A +R +
Sbjct: 91 CLLLGVSVGVICNVMFPEWLITALFAVFLASATFKTYGTGMKRWRAET----AAARRMLE 146
Query: 222 TSEELEYRPVPASESKPPSDEAVSILHNVYWKEFGLLAFVWIAFLALQV 270
L A + D H + +L +W+ F + +
Sbjct: 147 GGSSLGDGAGEALLGQKDGDG-----HRRQCVDLMVLVTIWLCFFVIHL 190
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.327 0.142 0.455
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 12,685,075
Number of extensions: 424806
Number of successful extensions: 1421
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 1404
Number of HSP's successfully gapped: 5
Length of query: 469
Length of database: 17,035,801
Length adjustment: 104
Effective length of query: 365
Effective length of database: 11,605,545
Effective search space: 4236023925
Effective search space used: 4236023925
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 158 (65.5 bits)