Os09g0344800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF81 family protein.
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Os09g0344800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF81 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 73.35 | 0.402 | 13.2 | 0.818 | 1.09 | -0.799 | 0.857 | 0.863 | 0.0843 | 6.62 | 20.29 | 3906 | -- | -- |
| 74.64 | 0.402 | 13.3 | 0.647 | 1.08 | -0.921 | 1.01 | -- | 0.0816 | 6.51 | 20.2 | 3923 | -- | -- |
| 75.18 | 0.404 | 13.2 | 0.835 | 1.09 | -0.79 | -- | 0.904 | 0.0833 | 6.65 | 20.3 | 3937 | -- | -- |
| 76.22 | 0.407 | 13.3 | 0.712 | 1.1 | -0.97 | -- | -- | 0.0644 | 6.64 | 20.2 | 3925 | -- | -- |
| 135.88 | 0.543 | 13.3 | 0.837 | -- | -0.839 | -- | 0.747 | 0.101 | -- | 20.2 | 3554 | -- | -- |
| 90.96 | 0.447 | 13.3 | 0.112 | 1.08 | -- | 0.919 | -- | -0.21 | 6.74 | -- | -- | -- | -- |
| 93.09 | 0.452 | 13.3 | 0.127 | 1.08 | -- | -- | -- | -0.213 | 6.8 | -- | -- | -- | -- |
| 136.74 | 0.545 | 13.3 | 0.75 | -- | -1.01 | -- | -- | 0.0948 | -- | 20.1 | 3555 | -- | -- |
| 83.28 | 0.425 | 13.3 | -- | 1.09 | -0.611 | -- | -- | -0.104 | 6.6 | 20.2 | 2480 | -- | -- |
| 154.24 | 0.58 | 13.4 | 0.151 | -- | -- | -- | -- | -0.192 | -- | -- | -- | -- | -- |
| 93.52 | 0.452 | 13.3 | -- | 1.08 | -- | -- | -- | -0.227 | 6.79 | -- | -- | -- | -- |
| 142.95 | 0.557 | 13.3 | -- | -- | -0.643 | -- | -- | -0.0815 | -- | 20.7 | 2041 | -- | -- |
| 154.84 | 0.581 | 13.4 | -- | -- | -- | -- | -- | -0.208 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 70.59 | temperature | 20 | 1440 | > th | dose independent | rect. | 2 | 1 |
| 2 | 70.62 | temperature | 20 | 1440 | < th | dose independent | rect. | 2 | 1 |
| 7 | 70.99 | temperature | 20 | 270 | > th | dose independent | rect. | 15 | 19 |
| 24 | 71.66 | temperature | 20 | 90 | > th | dose independent | rect. | 17 | 18 |
| 38 | 71.97 | humidity | 90 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 51 | 72.44 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 54 | 72.49 | temperature | 20 | 1440 | > th | dose independent | rect. | 23 | 10 |
| 57 | 72.50 | temperature | 20 | 1440 | < th | dose independent | rect. | 24 | 9 |
| 80 | 72.69 | temperature | 20 | 1440 | > th | dose independent | sin | 10 | NA |
| 88 | 72.72 | temperature | 15 | 270 | > th | dose dependent | rect. | 15 | 19 |
| 93 | 72.73 | temperature | 10 | 270 | > th | dose dependent | rect. | 14 | 21 |
| 97 | 72.76 | temperature | 20 | 1440 | < th | dose independent | sin | 10 | NA |
| 179 | 73.05 | temperature | 10 | 270 | > th | dose dependent | rect. | 5 | 16 |
| 194 | 73.11 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 2 |
| 200 | 73.13 | humidity | 90 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 219 | 73.18 | humidity | 90 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 294 | 73.43 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 21 | 17 |
| 305 | 73.47 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 22 | 15 |
| 344 | 73.58 | wind | 3 | 43200 | < th | dose dependent | rect. | 6 | 3 |
| 369 | 73.67 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 14 |
| 372 | 73.68 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 24 | 12 |
| 381 | 73.69 | atmosphere | 995 | 43200 | < th | dose dependent | sin | 9 | NA |
| 382 | 73.70 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 1 | 10 |
| 389 | 73.71 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 1 | 10 |
| 402 | 73.76 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 2 | 8 |
| 404 | 73.76 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 19 |
| 405 | 73.77 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 5 | 3 |
| 410 | 73.78 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 4 | 5 |
| 411 | 73.78 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 2 | 8 |
| 415 | 73.78 | atmosphere | 995 | 43200 | < th | dose dependent | rect. | 4 | 4 |
| 430 | 73.82 | atmosphere | 995 | 43200 | < th | dose dependent | rect. | 1 | 8 |
| 438 | 73.84 | temperature | 25 | 1440 | < th | dose dependent | rect. | 6 | 3 |
| 439 | 73.84 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 11 |
| 454 | 73.88 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 21 | 17 |
| 470 | 73.91 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 3 | 6 |
| 509 | 73.99 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 8 |
| 525 | 74.02 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 5 | 3 |
| 530 | 74.02 | atmosphere | 995 | 43200 | < th | dose dependent | rect. | 21 | 13 |
| 609 | 74.15 | humidity | 90 | 14400 | > th | dose dependent | rect. | 22 | 1 |
| 652 | 74.23 | humidity | 90 | 14400 | > th | dose dependent | sin | 0 | NA |
| 654 | 74.23 | humidity | 90 | 14400 | > th | dose dependent | rect. | 10 | 15 |
| 659 | 74.24 | humidity | 90 | 14400 | > th | dose dependent | rect. | 14 | 10 |
| 660 | 74.25 | humidity | 90 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 741 | 74.38 | humidity | 90 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 742 | 74.38 | humidity | 90 | 14400 | > th | dose dependent | sin | 19 | NA |
| 777 | 74.45 | temperature | 20 | 270 | > th | dose independent | rect. | 5 | 15 |
| 858 | 74.54 | temperature | 20 | 1440 | > th | dose independent | rect. | 6 | 1 |
| 912 | 74.62 | wind | 3 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 925 | 74.63 | atmosphere | 995 | 43200 | < th | dose independent | sin | 7 | NA |
| 975 | 74.67 | humidity | 90 | 14400 | > th | dose independent | rect. | 6 | 1 |