BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0344800 Os09g0344800|AK067189
(481 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G25737.1 | chr2:10977174-10979677 FORWARD LENGTH=477 521 e-148
AT2G36630.1 | chr2:15352767-15355050 REVERSE LENGTH=460 297 7e-81
AT1G61740.1 | chr1:22798365-22801020 REVERSE LENGTH=459 127 1e-29
AT1G11540.1 | chr1:3875476-3876973 REVERSE LENGTH=368 127 1e-29
AT4G21250.1 | chr4:11325030-11326637 FORWARD LENGTH=450 105 4e-23
AT4G21260.1 | chr4:11327543-11329057 FORWARD LENGTH=394 92 6e-19
>AT2G25737.1 | chr2:10977174-10979677 FORWARD LENGTH=477
Length = 476
Score = 521 bits (1343), Expect = e-148, Method: Compositional matrix adjust.
Identities = 262/430 (60%), Positives = 299/430 (69%), Gaps = 5/430 (1%)
Query: 53 EEVGILRKVANFLWQTDGNSYHHVWPEMELGWQIVLGSLXXXXXXXXXXXXXXXXXXXXV 112
E K NFLW++D Y HVWPE E WQIVLG+L V
Sbjct: 47 NESSFFLKAINFLWESDQIGYRHVWPEFEFNWQIVLGTLVGFFGAAFGSVGGVGGGGIFV 106
Query: 113 PMLTLIIGFDPKSSTAISKCMIMGAAVSTVYYNLKLKHPTLDMPVIDYDLALLIQPMLML 172
PML+LIIGFDPKS+TAISKCMIMGA+VSTVYYNL+L+HPTLDMP+IDYDLALLIQPMLML
Sbjct: 107 PMLSLIIGFDPKSATAISKCMIMGASVSTVYYNLRLRHPTLDMPIIDYDLALLIQPMLML 166
Query: 173 GISIGVIFNVLFPDWLVTVLLIILFLGTSTKAFLKGVETWKKETIIKREAAKRLEQ---T 229
GISIGV FNV+FPDWLVTVLLI+LFLGTSTKAFLKG ETW KETI K+EAAKRLE +
Sbjct: 167 GISIGVAFNVIFPDWLVTVLLIVLFLGTSTKAFLKGSETWNKETIEKKEAAKRLESNGVS 226
Query: 230 SEEPEYAPLPTGPGAVADAKRPSDEAASLMKNIYWKEFGLLAFVWMAFLVLQVTKNYTAT 289
E EY PLP P K+ E S+++N+YWKE GLL FVW+ FL LQ++K A
Sbjct: 227 GTEVEYVPLPAAPSTNPGNKK--KEEVSIIENVYWKELGLLVFVWIVFLALQISKQNLAN 284
Query: 290 CSSWYWILNLLQIPVSVGVTMYEALGLMSGKRVLSSKGNEQTTLKFHQLCIYCFFGITAX 349
CS YW++NLLQIPV+VGV+ YEA+ L G+R+++SKG + QL +YC FGI A
Sbjct: 285 CSVAYWVINLLQIPVAVGVSGYEAVALYQGRRIIASKGQGDSNFTVGQLVMYCTFGIIAG 344
Query: 350 XXXXXXXXXXXFIMGPLFLELGIPPQVXXXXXXXXXXXXXXXXVVEYYLLNRFPVPYALY 409
FIMGPLFLELG+PPQV VVEYYLL RFPVPYALY
Sbjct: 345 IVGGLLGLGGGFIMGPLFLELGVPPQVSSATATFAMTFSSSMSVVEYYLLKRFPVPYALY 404
Query: 410 XXXXXXXXXXXGQHVVRRLINWLGRASLIIFILAFMIFVSAISLGGVGISNMIHRINQHE 469
GQHVVRRLI +GRASLIIFILA MIF+SAISLGGVGI NMI +I +HE
Sbjct: 405 LVGVATIAAWVGQHVVRRLIAAIGRASLIIFILASMIFISAISLGGVGIVNMIGKIQRHE 464
Query: 470 YMGFENLCKY 479
YMGFENLCKY
Sbjct: 465 YMGFENLCKY 474
>AT2G36630.1 | chr2:15352767-15355050 REVERSE LENGTH=460
Length = 459
Score = 297 bits (761), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 161/421 (38%), Positives = 246/421 (58%), Gaps = 21/421 (4%)
Query: 71 NSYHHVWPEMELGWQIVLGSLXXXXXXXXXXXXXXXXXXXXVPMLTLIIGFDPKSSTAIS 130
++ +WP+++ W++VL ++ VPMLTLI+GFD KS+ AIS
Sbjct: 45 SATEKIWPDLKFSWKLVLATVIAFLGSACGTVGGVGGGGIFVPMLTLILGFDTKSAAAIS 104
Query: 131 KCMIMGAAVSTVYYNLKLKHPTLDMPVIDYDLALLIQPMLMLGISIGVIFNVLFPDWLVT 190
KCMIMGA+ S+V+YN++++HPT ++P++DYDLALL QPML+LGI++GV +V+FP WL+T
Sbjct: 105 KCMIMGASASSVWYNVRVRHPTKEVPILDYDLALLFQPMLLLGITVGVSLSVVFPYWLIT 164
Query: 191 VLLIILFLGTSTKAFLKGVETWKKETIIKREAAKRLEQTSE-------EPEYAPLPTGPG 243
VL+IILF+GTS+++F KG+E WK+ET++K E A++ + EY PL
Sbjct: 165 VLIIILFVGTSSRSFFKGIEMWKEETLLKNEMAQQRANMVNSRGELLIDTEYEPL----- 219
Query: 244 AVADAKRPSDEAASLMKNIYWKEFGLLAFVWMAFLVLQVTKNYTATCSSWYWILNLLQIP 303
+ E + N+ WK +L VW+ FL++Q+ KN CS+ YWIL ++Q P
Sbjct: 220 ---YPREEKSELEIIRSNLKWKGLLILVTVWLTFLLIQIVKNEIKVCSTIYWILFIVQFP 276
Query: 304 VSVGVTMYEALGLMSGKRVLSSKGNE----QTTLKFHQLC-IYC-FFGITAXXXXXXXXX 357
V++ V +EA L + + + GN + T+++ L I+C G+
Sbjct: 277 VALAVFGFEASKLYTANKKRLNSGNTECICEATIEWTPLSLIFCGLCGLIGGIVGGLLGS 336
Query: 358 XXXFIMGPLFLELGIPPQVXXXXXXXXXXXXXXXXVVEYYLLNRFPVPYALYXXXXXXXX 417
F++GPL LE+G+ PQV VVE+YLL RFP+PYA+Y
Sbjct: 337 GGGFVLGPLLLEIGVIPQVASATATFVMMFSSSLSVVEFYLLKRFPIPYAMYLISVSILA 396
Query: 418 XXXGQHVVRRLINWLGRASLIIFILAFMIFVSAISLGGVGISNMIHRINQHEYMGFENLC 477
GQ +R+L+ L RAS+I+F+L+ +I SA+++G +GI I I+ HE+MGF C
Sbjct: 397 GFWGQSFIRKLVAILRRASIIVFVLSGVICASALTMGVIGIEKSIKMIHNHEFMGFLGFC 456
Query: 478 K 478
Sbjct: 457 S 457
>AT1G61740.1 | chr1:22798365-22801020 REVERSE LENGTH=459
Length = 458
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 105/451 (23%), Positives = 198/451 (43%), Gaps = 41/451 (9%)
Query: 53 EEVGILRKVANFLWQTDGN---SYHHVWPEMELGWQIVLGSLXXXXXXXXXXXXXXXXXX 109
+E IL V L +T S P +EL ++ L
Sbjct: 23 QEPSILSPVDQLLNKTSSYLDFSTKFNQPRIELTTSTIIAGLLSFLASSISSAGGIGGGG 82
Query: 110 XXVPMLTLIIGFDPKSSTAISKCMIMGAAVSTVYYNLKLKHP-TLDMPVIDYDLALLIQP 168
VP++T++ G D K++++ S M+ G +++ V NL +++P + +ID+DLALL++P
Sbjct: 83 LYVPIMTIVAGLDLKTASSFSAFMVTGGSIANVGCNLFVRNPKSGGKTLIDFDLALLLEP 142
Query: 169 MLMLGISIGVIFNVLFPDWLVTVLLIILFLGTSTKAFLKGVETWKKET-IIKREAAKRL- 226
++LG+SIGVI N++FP+WL+T L + ++ K F G+ W+ E+ ++K + R+
Sbjct: 143 CMLLGVSIGVICNLVFPNWLITSLFAVFLAWSTLKTFGNGLYYWRLESEMVKIRESNRIE 202
Query: 227 -EQTSEEPEYAPLPTGPGAVADAKRPSDEAASLMKNIYWKEFGLLAFVWMAFLVLQVTKN 285
+ ++ E LP + D +RP K W + G+L +W+++ + + +
Sbjct: 203 EDDEEDKIESLKLPL----LEDYQRP--------KRFPWIKLGVLVIIWLSYFAVYLLRG 250
Query: 286 YT--------ATCSSWYWILNLLQIPVSVGVTMYEALG-----------LMSGKRVLSSK 326
C + YW+++ QIP+++ T++ +S K V +
Sbjct: 251 NKYGEGIISIEPCGNAYWLISSSQIPLTLFFTLWICFSDNVQSQQQSDYHVSVKDVEDLR 310
Query: 327 GNEQTTLKFHQLCIYCFFGITAXXXXXXXXXXXXFIMGPLFLELGIPPQVXXXXXXXXXX 386
N+ C++ + A ++ PL L++GI P+V
Sbjct: 311 SNDGAR---SNKCMFPVMALLAGVLGGVFGIGGGMLISPLLLQVGIAPEVTAATCSFMVL 367
Query: 387 XXXXXXVVEYYLLNRFPVPYALYXXXXXXXXXXXGQHVVRRLINWLGRASLIIFILAFMI 446
++Y LL A G VV+++I GRAS+I+F + ++
Sbjct: 368 FSSTMSAIQYLLLGMEHTGTASIFAVICFVASLVGLKVVQKVITEYGRASIIVFSVGIVM 427
Query: 447 FVSAISLGGVGISNMIHRINQHEYMGFENLC 477
+S + + G ++ + YMGF+ C
Sbjct: 428 ALSIVLMTSYGALDVWNDYVSGRYMGFKLPC 458
>AT1G11540.1 | chr1:3875476-3876973 REVERSE LENGTH=368
Length = 367
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 100/377 (26%), Positives = 172/377 (45%), Gaps = 24/377 (6%)
Query: 115 LTLIIGFDPKSSTAISKCMIMGAAVSTVYYNLKLKHP-TLDMPVIDYDLALLIQPMLMLG 173
+T+I G + K++++ S M+ G + + V NL L++P + D +ID+DLAL IQP L+LG
Sbjct: 1 MTIIAGLEMKTASSFSAFMVTGVSFANVGCNLFLRNPKSRDKTLIDFDLALTIQPCLLLG 60
Query: 174 ISIGVIFNVLFPDWLVTVLLIILFLGTSTKAFLKGVETWKKETIIKREAAKRLEQTSEEP 233
+SIGVI N +FP+WLV L + ++ K KGV W E+ A + + +
Sbjct: 61 VSIGVICNRMFPNWLVLFLFAVFLAWSTMKTCKKGVSYWNLES---ERAKIKSPRDVDGI 117
Query: 234 EYAPLPTGPGAVADAKRPSDEAASLMKNIYWKEFGLLAFVWMAFLVLQVTKNYT------ 287
E A P D ++ M W + G+L +W+ F + + +
Sbjct: 118 EVARSPLLSEEREDVRQRG------MIRFPWMKLGVLVIIWLLFFSINLFRGNKYGQGII 171
Query: 288 --ATCSSWYWILNLLQIPVSVGVTM--YEALGLMSGKRVLSSKGNEQTT---LKFHQLCI 340
C + YW L+ LQIP+++ T+ Y + + S S++ +EQ T + ++L +
Sbjct: 172 SIKPCGALYWFLSSLQIPLTIFFTLCIYFSDNVQSNHTSHSNQNSEQETGVGGRQNKL-M 230
Query: 341 YCFFGITAXXXXXXXXXXXXFIMGPLFLELGIPPQVXXXXXXXXXXXXXXXXVVEYYLLN 400
+ A ++ PL L++GI P+V ++Y LL
Sbjct: 231 LPVMALLAGVLGGLFGIGGGMLISPLLLQIGIAPEVTAATCSFMVLFSSSMSAIQYLLLG 290
Query: 401 RFPVPYALYXXXXXXXXXXXGQHVVRRLINWLGRASLIIFILAFMIFVSAISLGGVGISN 460
A G VV+++I GRAS+I+F + ++ +S + + G N
Sbjct: 291 MEHAGTAAIFALVCFVASLVGLMVVKKVIAKYGRASIIVFAVGIVMALSTVLMTTHGAFN 350
Query: 461 MIHRINQHEYMGFENLC 477
+ + YMGF+ C
Sbjct: 351 VWNDFVSGRYMGFKLPC 367
>AT4G21250.1 | chr4:11325030-11326637 FORWARD LENGTH=450
Length = 449
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 105/384 (27%), Positives = 168/384 (43%), Gaps = 36/384 (9%)
Query: 112 VPMLTLIIGFDPKSSTAISKCMIMGAAVSTVYYNLKLKHPTLDMPVIDYDLALLIQPMLM 171
+P++T++ G D K++++ S M+ G +++ V NL ++DYDLALL++P ++
Sbjct: 84 IPIMTIVAGVDLKTASSFSAFMVTGGSIANVISNL-----FGGKALLDYDLALLLEPCML 138
Query: 172 LGISIGVIFNVLFPDWLVTVLLIILFLGTSTKAFLKGVETWKKETIIKREAAK-RLE--- 227
LG+SIGVI N + P+WL+TVL + +S K GV+ WK E+ I RE+ R E
Sbjct: 139 LGVSIGVICNRVLPEWLITVLFAVFLAWSSLKTCRSGVKFWKLESEIARESGHGRPERGQ 198
Query: 228 -QTSEEPE--YAPLPTGPGAVADAKRPSDEAASLMKNIYWKEFGLLAFVWMAFLVLQVTK 284
Q EE + APL +K P W + G+L VW +F V+ + +
Sbjct: 199 GQIEEETKNLKAPLLEAQATKNKSKIP------------WTKLGVLVIVWASFFVIYLLR 246
Query: 285 NYT--------ATCSSWYWILNLLQIPVSVGVTMYEALGLMSGKRVLS---SKGNEQTTL 333
C YWIL LQIP+++ T AL ++ S K E T L
Sbjct: 247 GNKDGKGIITIKPCGVEYWILLSLQIPLALIFTKL-ALSRTESRQEQSPNDQKNQEGTRL 305
Query: 334 KFHQLCIYCFFGITAXXXXXXXXXXXXFIMGPLFLELGIPPQVXXXXXXXXXXXXXXXXV 393
+ A ++ PL L+ GIPPQ+
Sbjct: 306 DKSTRLKFPAMSFLAGLLGGIFGIGGGMLISPLLLQSGIPPQITAATTSFMVFFSATMSA 365
Query: 394 VEYYLLNRFPVPYALYXXXXXXXXXXXGQHVVRRLINWLGRASLIIFILAFMIFVSAISL 453
V+Y LL A G +V++ + GRAS+I+F + ++ +S + +
Sbjct: 366 VQYLLLGMQNTDTAYVFSFICFLASLLGLVLVQKAVAQFGRASIIVFSVGTVMSLSTVLM 425
Query: 454 GGVGISNMIHRINQHEYMGFENLC 477
G ++ + MGF+ C
Sbjct: 426 TSFGALDVWTDYVAGKDMGFKLPC 449
>AT4G21260.1 | chr4:11327543-11329057 FORWARD LENGTH=394
Length = 393
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 141/339 (41%), Gaps = 44/339 (12%)
Query: 120 GFDPKSSTAISKCMIMGAAVSTVYYNLKLKHPTLDMPVIDYDLALLIQPMLMLGISIGVI 179
G D K++++ S M+ G +++ + N H +IDYDLALL++P ++LG+S+GVI
Sbjct: 80 GIDLKAASSFSAFMVTGGSIANLINN----HFGCK-KLIDYDLALLLEPCMLLGVSVGVI 134
Query: 180 FNVLFPDWLVTVLLIILFLGTSTKAFLKGVETWKKETIIKREAAKRLEQTSEEPEYAPLP 239
N +FP+WL+T L ++ + +S + G +WK I++ + R + +E +
Sbjct: 135 CNKVFPEWLITGLFVVFLMWSSMETCENGHTSWKLSLILREKEDMRDSRLAEVKRRRTII 194
Query: 240 TGPGAVADAKRPSDEAASLMKNIYWKEFGLLAFVWMAFLVLQVTKNYTATCSSWYWILNL 299
K+ + + L +N+ G+++ CS YWIL
Sbjct: 195 FFKHLYLKIKKTETKQSFLGRNL-----GIISI---------------KPCSVEYWILLS 234
Query: 300 LQIPVSVGVTMYEALGLMSGKRVLSSKGNEQTTLKFHQLCIYCFFGITAXXXXXXXXXXX 359
LQIP+++ T+ AL + S E A
Sbjct: 235 LQIPLALVFTIL-ALSRTESLQEQSISNQE------------------AGLLGGIFGIGG 275
Query: 360 XFIMGPLFLELGIPPQVXXXXXXXXXXXXXXXXVVEYYLLNRFPVPYALYXXXXXXXXXX 419
I+ PL L GIPPQV V+Y LL A
Sbjct: 276 GMIISPLLLRAGIPPQVTAATTSFMVFFSATMSGVQYLLLGMQNTEAAYVFSVICFFAST 335
Query: 420 XGQHVVRRLINWLGRASLIIFILAFMIFVSAISLGGVGI 458
G ++++ RAS+I+F++ M++++ I + GI
Sbjct: 336 LGLVFAQKVVPHFRRASIIVFLVGTMMYLTTIVMASFGI 374
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.326 0.140 0.443
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 8,201,750
Number of extensions: 283359
Number of successful extensions: 923
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 901
Number of HSP's successfully gapped: 6
Length of query: 481
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 379
Effective length of database: 8,310,137
Effective search space: 3149541923
Effective search space used: 3149541923
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 114 (48.5 bits)