BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0389700 Os08g0389700|AK065108
(465 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G25737.1 | chr2:10977174-10979677 FORWARD LENGTH=477 440 e-123
AT2G36630.1 | chr2:15352767-15355050 REVERSE LENGTH=460 263 1e-70
AT1G11540.1 | chr1:3875476-3876973 REVERSE LENGTH=368 99 4e-21
AT1G61740.1 | chr1:22798365-22801020 REVERSE LENGTH=459 97 2e-20
AT4G21250.1 | chr4:11325030-11326637 FORWARD LENGTH=450 92 8e-19
AT4G21260.1 | chr4:11327543-11329057 FORWARD LENGTH=394 80 2e-15
>AT2G25737.1 | chr2:10977174-10979677 FORWARD LENGTH=477
Length = 476
Score = 440 bits (1131), Expect = e-123, Method: Compositional matrix adjust.
Identities = 227/430 (52%), Positives = 263/430 (61%), Gaps = 6/430 (1%)
Query: 38 EEVGYMRKVVNFLW-SGEASYHHVWPPMEFGWKIVXXXXXXXXXXXXXXXXXXXXXXXXV 96
E + K +NFLW S + Y HVWP EF W+IV V
Sbjct: 47 NESSFFLKAINFLWESDQIGYRHVWPEFEFNWQIVLGTLVGFFGAAFGSVGGVGGGGIFV 106
Query: 97 PMLTLIIGFDAKSSTAISKCMIMGAAVSTVYYNLKLKHPTLDMPVIDYDLALLIQPMLML 156
PML+LIIGFD KS+TAISKCMIMGA+VSTVYYNL+L+HPTLDMP+IDYDLALLIQPMLML
Sbjct: 107 PMLSLIIGFDPKSATAISKCMIMGASVSTVYYNLRLRHPTLDMPIIDYDLALLIQPMLML 166
Query: 157 GISIGVLFNVIFPDWLITVLLIILFLGTSTKAFLKGVETWKKETILKREAAKRLEQ---I 213
GISIGV FNVIFPDWL+TVLLI+LFLGTSTKAFLKG ETW KETI K+EAAKRLE
Sbjct: 167 GISIGVAFNVIFPDWLVTVLLIVLFLGTSTKAFLKGSETWNKETIEKKEAAKRLESNGVS 226
Query: 214 AEEPEYSPLPTGPNATAESKAPSDEAASLWQNVYWKEFGLLAFVWIAFLVLQVTKNYMPT 273
E EY PLP P+ +K E S+ +NVYWKE GLL FVWI FL LQ++K +
Sbjct: 227 GTEVEYVPLPAAPSTNPGNK--KKEEVSIIENVYWKELGLLVFVWIVFLALQISKQNLAN 284
Query: 274 CSTWYWVLNFLQIPVSVGVTMYEGLGLMQGRRVISSKGDEQTNLKFHQLLVYCXXXXXXX 333
CS YWV+N LQIPV+VGV+ YE + L QGRR+I+SKG +N QL++YC
Sbjct: 285 CSVAYWVINLLQIPVAVGVSGYEAVALYQGRRIIASKGQGDSNFTVGQLVMYCTFGIIAG 344
Query: 334 XXXXXXXXXXXXXXXXXXXELGIPPQVXXXXXXXXXXXXXXXXVVEYYLLDRFPVPYXXX 393
ELG+PPQV VVEYYLL RFPVPY
Sbjct: 345 IVGGLLGLGGGFIMGPLFLELGVPPQVSSATATFAMTFSSSMSVVEYYLLKRFPVPYALY 404
Query: 394 XXXXXXXXXIIGQHIVRKLINWLGRXXXXXXXXXXXXXXXXXXXGGVGISNMIGKIARHE 453
+GQH+VR+LI +GR GGVGI NMIGKI RHE
Sbjct: 405 LVGVATIAAWVGQHVVRRLIAAIGRASLIIFILASMIFISAISLGGVGIVNMIGKIQRHE 464
Query: 454 YMGFDNICNY 463
YMGF+N+C Y
Sbjct: 465 YMGFENLCKY 474
>AT2G36630.1 | chr2:15352767-15355050 REVERSE LENGTH=460
Length = 459
Score = 263 bits (673), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 154/449 (34%), Positives = 226/449 (50%), Gaps = 27/449 (6%)
Query: 30 FADAVAAPEEVGYMRKVVNFLWSGEASYHHVWPPMEFGWKIVXXXXXXXXXXXXXXXXXX 89
F+ AV + VG ++ S ++ +WP ++F WK+V
Sbjct: 20 FSVAVFSVSYVGDTTNPIHHHLSSLSATEKIWPDLKFSWKLVLATVIAFLGSACGTVGGV 79
Query: 90 XXXXXXVPMLTLIIGFDAKSSTAISKCMIMGAAVSTVYYNLKLKHPTLDMPVIDYDLALL 149
VPMLTLI+GFD KS+ AISKCMIMGA+ S+V+YN++++HPT ++P++DYDLALL
Sbjct: 80 GGGGIFVPMLTLILGFDTKSAAAISKCMIMGASASSVWYNVRVRHPTKEVPILDYDLALL 139
Query: 150 IQPMLMLGISIGVLFNVIFPDWLITVLLIILFLGTSTKAFLKGVETWKKETILKREAAKR 209
QPML+LGI++GV +V+FP WLITVL+IILF+GTS+++F KG+E WK+ET+LK E A++
Sbjct: 140 FQPMLLLGITVGVSLSVVFPYWLITVLIIILFVGTSSRSFFKGIEMWKEETLLKNEMAQQ 199
Query: 210 LEQIAE-------EPEYSPLPTGPNATAESKAPSDEAASL---WQNVYWKEFGLLAFVWI 259
+ + EY PL P +E + L N+ WK +L VW+
Sbjct: 200 RANMVNSRGELLIDTEYEPL-----------YPREEKSELEIIRSNLKWKGLLILVTVWL 248
Query: 260 AFLVLQVTKNYMPTCSTWYWVLNFLQIPVSVGVTMYEGLGLMQGRRVISSKGDE----QT 315
FL++Q+ KN + CST YW+L +Q PV++ V +E L + + G+ +
Sbjct: 249 TFLLIQIVKNEIKVCSTIYWILFIVQFPVALAVFGFEASKLYTANKKRLNSGNTECICEA 308
Query: 316 NLKFHQL-LVYCXXXXXXXXXXXXXXXXXXXXXXX-XXXELGIPPQVXXXXXXXXXXXXX 373
+++ L L++C E+G+ PQV
Sbjct: 309 TIEWTPLSLIFCGLCGLIGGIVGGLLGSGGGFVLGPLLLEIGVIPQVASATATFVMMFSS 368
Query: 374 XXXVVEYYLLDRFPVPYXXXXXXXXXXXXIIGQHIVRKLINWLGRXXXXXXXXXXXXXXX 433
VVE+YLL RFP+PY GQ +RKL+ L R
Sbjct: 369 SLSVVEFYLLKRFPIPYAMYLISVSILAGFWGQSFIRKLVAILRRASIIVFVLSGVICAS 428
Query: 434 XXXXGGVGISNMIGKIARHEYMGFDNICN 462
G +GI I I HE+MGF C+
Sbjct: 429 ALTMGVIGIEKSIKMIHNHEFMGFLGFCS 457
>AT1G11540.1 | chr1:3875476-3876973 REVERSE LENGTH=368
Length = 367
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 91/380 (23%), Positives = 148/380 (38%), Gaps = 30/380 (7%)
Query: 99 LTLIIGFDAKSSTAISKCMIMGAAVSTVYYNLKLKHP-TLDMPVIDYDLALLIQPMLMLG 157
+T+I G + K++++ S M+ G + + V NL L++P + D +ID+DLAL IQP L+LG
Sbjct: 1 MTIIAGLEMKTASSFSAFMVTGVSFANVGCNLFLRNPKSRDKTLIDFDLALTIQPCLLLG 60
Query: 158 ISIGVLFNVIFPDWLITVLLIILFLGTSTKAFLKGVETWKKETILKREAAKRLEQIAEEP 217
+SIGV+ N +FP+WL+ L + ++ K KGV W E+ +R K
Sbjct: 61 VSIGVICNRMFPNWLVLFLFAVFLAWSTMKTCKKGVSYWNLES--ERAKIK--------- 109
Query: 218 EYSPLPTGPNATAESKAPSDEAASLWQNVY----WKEFGLLAFVWIAFLVLQVTKN---- 269
SP A S S+E + Q W + G+L +W+ F + + +
Sbjct: 110 --SPRDVDGIEVARSPLLSEEREDVRQRGMIRFPWMKLGVLVIIWLLFFSINLFRGNKYG 167
Query: 270 ----YMPTCSTWYWVLNFLQIPVSVGVTM--YEGLGLMQGRRVISSKGDEQ-TNLKFHQ- 321
+ C YW L+ LQIP+++ T+ Y + S++ EQ T + Q
Sbjct: 168 QGIISIKPCGALYWFLSSLQIPLTIFFTLCIYFSDNVQSNHTSHSNQNSEQETGVGGRQN 227
Query: 322 LLVYCXXXXXXXXXXXXXXXXXXXXXXXXXXELGIPPQVXXXXXXXXXXXXXXXXVVEYY 381
L+ ++GI P+V ++Y
Sbjct: 228 KLMLPVMALLAGVLGGLFGIGGGMLISPLLLQIGIAPEVTAATCSFMVLFSSSMSAIQYL 287
Query: 382 LLDRFPVPYXXXXXXXXXXXXIIGQHIVRKLINWLGRXXXXXXXXXXXXXXXXXXXGGVG 441
LL ++G +V+K+I GR G
Sbjct: 288 LLGMEHAGTAAIFALVCFVASLVGLMVVKKVIAKYGRASIIVFAVGIVMALSTVLMTTHG 347
Query: 442 ISNMIGKIARHEYMGFDNIC 461
N+ YMGF C
Sbjct: 348 AFNVWNDFVSGRYMGFKLPC 367
>AT1G61740.1 | chr1:22798365-22801020 REVERSE LENGTH=459
Length = 458
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 118/210 (56%), Gaps = 20/210 (9%)
Query: 96 VPMLTLIIGFDAKSSTAISKCMIMGAAVSTVYYNLKLKHP-TLDMPVIDYDLALLIQPML 154
VP++T++ G D K++++ S M+ G +++ V NL +++P + +ID+DLALL++P +
Sbjct: 85 VPIMTIVAGLDLKTASSFSAFMVTGGSIANVGCNLFVRNPKSGGKTLIDFDLALLLEPCM 144
Query: 155 MLGISIGVLFNVIFPDWLITVLLIILFLGTSTKAFLKGVETWKKET-ILKREAAKRLEQI 213
+LG+SIGV+ N++FP+WLIT L + ++ K F G+ W+ E+ ++K + R+E+
Sbjct: 145 LLGVSIGVICNLVFPNWLITSLFAVFLAWSTLKTFGNGLYYWRLESEMVKIRESNRIEED 204
Query: 214 AEEPEYSPLPTGPNATAESKAPSDEAASLWQNVYWKEFGLLAFVWIAFLVLQVTKN---- 269
EE + L K P E + W + G+L +W+++ + + +
Sbjct: 205 DEEDKIESL----------KLPLLEDYQRPKRFPWIKLGVLVIIWLSYFAVYLLRGNKYG 254
Query: 270 ----YMPTCSTWYWVLNFLQIPVSVGVTMY 295
+ C YW+++ QIP+++ T++
Sbjct: 255 EGIISIEPCGNAYWLISSSQIPLTLFFTLW 284
>AT4G21250.1 | chr4:11325030-11326637 FORWARD LENGTH=450
Length = 449
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 145/341 (42%), Gaps = 36/341 (10%)
Query: 96 VPMLTLIIGFDAKSSTAISKCMIMGAAVSTVYYNLKLKHPTLDMPVIDYDLALLIQPMLM 155
+P++T++ G D K++++ S M+ G +++ V NL ++DYDLALL++P ++
Sbjct: 84 IPIMTIVAGVDLKTASSFSAFMVTGGSIANVISNL-----FGGKALLDYDLALLLEPCML 138
Query: 156 LGISIGVLFNVIFPDWLITVLLIILFLGTSTKAFLKGVETWKKETILKREAAK-RLE--- 211
LG+SIGV+ N + P+WLITVL + +S K GV+ WK E+ + RE+ R E
Sbjct: 139 LGVSIGVICNRVLPEWLITVLFAVFLAWSSLKTCRSGVKFWKLESEIARESGHGRPERGQ 198
Query: 212 -QIAEEPE--YSPLPTGPNATAESKAPSDEAASLWQNVYWKEFGLLAFVWIAFLVLQVTK 268
QI EE + +PL +SK P W + G+L VW +F V+ + +
Sbjct: 199 GQIEEETKNLKAPLLEAQATKNKSKIP------------WTKLGVLVIVWASFFVIYLLR 246
Query: 269 N--------YMPTCSTWYWVLNFLQIPVSVGVTMYEGLGLMQGRRVIS---SKGDEQTNL 317
+ C YW+L LQIP+++ T L + R+ S K E T L
Sbjct: 247 GNKDGKGIITIKPCGVEYWILLSLQIPLALIFTKL-ALSRTESRQEQSPNDQKNQEGTRL 305
Query: 318 KFHQLLVYCXXXXXXXXXXXXXXXXXXXXXXXXXXELGIPPQVXXXXXXXXXXXXXXXXV 377
L + + GIPPQ+
Sbjct: 306 DKSTRLKFPAMSFLAGLLGGIFGIGGGMLISPLLLQSGIPPQITAATTSFMVFFSATMSA 365
Query: 378 VEYYLLDRFPVPYXXXXXXXXXXXXIIGQHIVRKLINWLGR 418
V+Y LL ++G +V+K + GR
Sbjct: 366 VQYLLLGMQNTDTAYVFSFICFLASLLGLVLVQKAVAQFGR 406
>AT4G21260.1 | chr4:11327543-11329057 FORWARD LENGTH=394
Length = 393
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 98/191 (51%), Gaps = 25/191 (13%)
Query: 104 GFDAKSSTAISKCMIMGAAVSTVYYNLKLKHPTLDMPVIDYDLALLIQPMLMLGISIGVL 163
G D K++++ S M+ G +++ + N H +IDYDLALL++P ++LG+S+GV+
Sbjct: 80 GIDLKAASSFSAFMVTGGSIANLINN----HFGCK-KLIDYDLALLLEPCMLLGVSVGVI 134
Query: 164 FNVIFPDWLITVLLIILFLGTSTKAFLKGVETWKKETILKREAAKRLEQIAEEPEYSPLP 223
N +FP+WLIT L ++ + +S + G +WK IL+ + R ++AE +
Sbjct: 135 CNKVFPEWLITGLFVVFLMWSSMETCENGHTSWKLSLILREKEDMRDSRLAEVKRRRTII 194
Query: 224 TGPNATAESKAPSDEAASLWQNVYWKEFGLLAFVWIAFLVLQVTKNYMPTCSTWYWVLNF 283
+ + K + + L +N+ G+++ + CS YW+L
Sbjct: 195 FFKHLYLKIKKTETKQSFLGRNL-----GIIS---------------IKPCSVEYWILLS 234
Query: 284 LQIPVSVGVTM 294
LQIP+++ T+
Sbjct: 235 LQIPLALVFTI 245
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.324 0.141 0.449
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,615,450
Number of extensions: 258834
Number of successful extensions: 756
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 737
Number of HSP's successfully gapped: 7
Length of query: 465
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 363
Effective length of database: 8,310,137
Effective search space: 3016579731
Effective search space used: 3016579731
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 113 (48.1 bits)