BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0726500 Os03g0726500|AK069807
(475 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G36630.1 | chr2:15352767-15355050 REVERSE LENGTH=460 454 e-128
AT2G25737.1 | chr2:10977174-10979677 FORWARD LENGTH=477 317 9e-87
AT1G61740.1 | chr1:22798365-22801020 REVERSE LENGTH=459 92 5e-19
AT4G21250.1 | chr4:11325030-11326637 FORWARD LENGTH=450 86 3e-17
AT1G11540.1 | chr1:3875476-3876973 REVERSE LENGTH=368 86 3e-17
AT4G21260.1 | chr4:11327543-11329057 FORWARD LENGTH=394 59 6e-09
>AT2G36630.1 | chr2:15352767-15355050 REVERSE LENGTH=460
Length = 459
Score = 454 bits (1167), Expect = e-128, Method: Compositional matrix adjust.
Identities = 238/432 (55%), Positives = 296/432 (68%), Gaps = 10/432 (2%)
Query: 46 GDANGGLR--LSSRSA--RVWPDLAFNWRVVVATVVGFLGSAFXXXXXXXXXXIFVPMLN 101
GD + LSS SA ++WPDL F+W++V+ATV+ FLGSA IFVPML
Sbjct: 31 GDTTNPIHHHLSSLSATEKIWPDLKFSWKLVLATVIAFLGSACGTVGGVGGGGIFVPMLT 90
Query: 102 LLVGFDTKSAAALSKCMIMGASASSVWYNLQVSHPTKEAPVIDYKLALLFQPMLMLGITI 161
L++GFDTKSAAA+SKCMIMGASASSVWYN++V HPTKE P++DY LALLFQPML+LGIT+
Sbjct: 91 LILGFDTKSAAAISKCMIMGASASSVWYNVRVRHPTKEVPILDYDLALLFQPMLLLGITV 150
Query: 162 GVELSVIFPYWLITVLIIILFIGTSSRSFYKGILMWKDXXXXXXXXXXXXXXSKSSCAAR 221
GV LSV+FPYWLITVLIIILF+GTSSRSF+KGI MWK+ +S
Sbjct: 151 GVSLSVVFPYWLITVLIIILFVGTSSRSFFKGIEMWKEETLLKNEMAQQRANMVNSRG-- 208
Query: 222 DVVIDPSCEEPLLCQPQPKEKSALETFLFNLRWKNILVLMTVWSSFLVLQIFKNNSQSCS 281
+++ID EPL P+ +EKS LE NL+WK +L+L+TVW +FL++QI KN + CS
Sbjct: 209 ELLIDTE-YEPL--YPR-EEKSELEIIRSNLKWKGLLILVTVWLTFLLIQIVKNEIKVCS 264
Query: 282 TFYWVINILQVPVALSVFLWEGVQLCRESRARRMDGNWECVCEASIEWSPAQLIFCAFCX 341
T YW++ I+Q PVAL+VF +E +L ++ R GN EC+CEA+IEW+P LIFC C
Sbjct: 265 TIYWILFIVQFPVALAVFGFEASKLYTANKKRLNSGNTECICEATIEWTPLSLIFCGLCG 324
Query: 342 XXXXXXXXXXXXXXXXXXXXXXXXXXCIPQVASATATXXXXXXXXXXXXEFYFLNRFPIP 401
IPQVASATAT EFY L RFPIP
Sbjct: 325 LIGGIVGGLLGSGGGFVLGPLLLEIGVIPQVASATATFVMMFSSSLSVVEFYLLKRFPIP 384
Query: 402 FAVYLICISILAGFWGQSLVRKLVHVLKRASLIVFILSSVIFASALTMGVVGTQKSISMI 461
+A+YLI +SILAGFWGQS +RKLV +L+RAS+IVF+LS VI ASALTMGV+G +KSI MI
Sbjct: 385 YAMYLISVSILAGFWGQSFIRKLVAILRRASIIVFVLSGVICASALTMGVIGIEKSIKMI 444
Query: 462 NNHEYMGFLDFC 473
+NHE+MGFL FC
Sbjct: 445 HNHEFMGFLGFC 456
>AT2G25737.1 | chr2:10977174-10979677 FORWARD LENGTH=477
Length = 476
Score = 317 bits (812), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 173/416 (41%), Positives = 241/416 (57%), Gaps = 12/416 (2%)
Query: 60 RVWPDLAFNWRVVVATVVGFLGSAFXXXXXXXXXXIFVPMLNLLVGFDTKSAAALSKCMI 119
VWP+ FNW++V+ T+VGF G+AF IFVPML+L++GFD KSA A+SKCMI
Sbjct: 69 HVWPEFEFNWQIVLGTLVGFFGAAFGSVGGVGGGGIFVPMLSLIIGFDPKSATAISKCMI 128
Query: 120 MGASASSVWYNLQVSHPTKEAPVIDYKLALLFQPMLMLGITIGVELSVIFPYWLITVLII 179
MGAS S+V+YNL++ HPT + P+IDY LALL QPMLMLGI+IGV +VIFP WL+TVL+I
Sbjct: 129 MGASVSTVYYNLRLRHPTLDMPIIDYDLALLIQPMLMLGISIGVAFNVIFPDWLVTVLLI 188
Query: 180 ILFIGTSSRSFYKGILMWKDXXXXXXXXXXXXXXSKSSCAARDVVIDPSCEEPLLCQPQP 239
+LF+GTS+++F KG W + S + V P+ +
Sbjct: 189 VLFLGTSTKAFLKGSETWNKETIEKKEAAKRLESNGVSGTEVEYVPLPAAPSTNPGNKKK 248
Query: 240 KEKSALETFLFNLRWKNILVLMTVWSSFLVLQIFKNNSQSCSTFYWVINILQVPVALSVF 299
+E S +E N+ WK + +L+ VW FL LQI K N +CS YWVIN+LQ+PVA+ V
Sbjct: 249 EEVSIIE----NVYWKELGLLVFVWIVFLALQISKQNLANCSVAYWVINLLQIPVAVGVS 304
Query: 300 LWEGVQLCRESRARRMDGNWECVCEASIEWSPAQLI-FCAFCXXXXXXXXXXXXXXXXXX 358
+E V L + R G + ++ QL+ +C F
Sbjct: 305 GYEAVALYQGRRIIASKGQGDS------NFTVGQLVMYCTFGIIAGIVGGLLGLGGGFIM 358
Query: 359 XXXXXXXXXCIPQVASATATXXXXXXXXXXXXEFYFLNRFPIPFAVYLICISILAGFWGQ 418
PQV+SATAT E+Y L RFP+P+A+YL+ ++ +A + GQ
Sbjct: 359 GPLFLELGVP-PQVSSATATFAMTFSSSMSVVEYYLLKRFPVPYALYLVGVATIAAWVGQ 417
Query: 419 SLVRKLVHVLKRASLIVFILSSVIFASALTMGVVGTQKSISMINNHEYMGFLDFCE 474
+VR+L+ + RASLI+FIL+S+IF SA+++G VG I I HEYMGF + C+
Sbjct: 418 HVVRRLIAAIGRASLIIFILASMIFISAISLGGVGIVNMIGKIQRHEYMGFENLCK 473
>AT1G61740.1 | chr1:22798365-22801020 REVERSE LENGTH=459
Length = 458
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 95/425 (22%), Positives = 173/425 (40%), Gaps = 39/425 (9%)
Query: 63 PDLAFNWRVVVATVVGFLGSAFXXXXXXXXXXIFVPMLNLLVGFDTKSAAALSKCMIMGA 122
P + ++A ++ FL S+ ++VP++ ++ G D K+A++ S M+ G
Sbjct: 51 PRIELTTSTIIAGLLSFLASSISSAGGIGGGGLYVPIMTIVAGLDLKTASSFSAFMVTGG 110
Query: 123 SASSVWYNLQVSHPTKEAP-VIDYKLALLFQPMLMLGITIGVELSVIFPYWLITVLIIIL 181
S ++V NL V +P +ID+ LALL +P ++LG++IGV +++FP WLIT L +
Sbjct: 111 SIANVGCNLFVRNPKSGGKTLIDFDLALLLEPCMLLGVSIGVICNLVFPNWLITSLFAVF 170
Query: 182 FIGTSSRSFYKGILMWKDXXXXXXXXXXXXXXSKSSCAARDVVIDPSCEEPLLCQPQPKE 241
++ ++F G+ W+ S + S + PLL Q +
Sbjct: 171 LAWSTLKTFGNGLYYWR-----LESEMVKIRESNRIEEDDEEDKIESLKLPLLEDYQRPK 225
Query: 242 KSALETFLFNLRWKNILVLMTVWSSFLVLQIFKNNS--------QSCSTFYWVINILQVP 293
+ W + VL+ +W S+ + + + N + C YW+I+ Q+P
Sbjct: 226 R---------FPWIKLGVLVIIWLSYFAVYLLRGNKYGEGIISIEPCGNAYWLISSSQIP 276
Query: 294 VALSVFLWEGVQLCRESRARRMDGNWECVCEASIE----WSPAQLIFCAF--CXXXXXXX 347
+ L LW +C + + V +E A+ C F
Sbjct: 277 LTLFFTLW----ICFSDNVQSQQQSDYHVSVKDVEDLRSNDGARSNKCMFPVMALLAGVL 332
Query: 348 XXXXXXXXXXXXXXXXXXXXCIPQVASATATXXXXXXXXXXXXEFYFLNRFPIPFAVYLI 407
P+V +AT + ++ L A
Sbjct: 333 GGVFGIGGGMLISPLLLQVGIAPEVTAATCSFMVLFSSTMSAIQYLLLGMEHTGTASIFA 392
Query: 408 CISILAGFWGQSLVRKLVHVLKRASLIVFILSSVIFASALTMGVVGTQKSISMINNH--- 464
I +A G +V+K++ RAS+IVF SV AL++ ++ + ++ + N++
Sbjct: 393 VICFVASLVGLKVVQKVITEYGRASIIVF---SVGIVMALSIVLMTSYGALDVWNDYVSG 449
Query: 465 EYMGF 469
YMGF
Sbjct: 450 RYMGF 454
>AT4G21250.1 | chr4:11325030-11326637 FORWARD LENGTH=450
Length = 449
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 99/405 (24%), Positives = 164/405 (40%), Gaps = 41/405 (10%)
Query: 64 DLAFNWRVVVATVVGFLGSAFXXXXXXXXXXIFVPMLNLLVGFDTKSAAALSKCMIMGAS 123
+L + +++A V+ FL + +F+P++ ++ G D K+A++ S M+ G S
Sbjct: 51 ELKLSSAIIMAGVLCFLAALISSAGGIGGGGLFIPIMTIVAGVDLKTASSFSAFMVTGGS 110
Query: 124 ASSVWYNLQVSHPTKEAPVIDYKLALLFQPMLMLGITIGVELSVIFPYWLITVLIIILFI 183
++V NL ++DY LALL +P ++LG++IGV + + P WLITVL +
Sbjct: 111 IANVISNL-----FGGKALLDYDLALLLEPCMLLGVSIGVICNRVLPEWLITVLFAVFLA 165
Query: 184 GTSSRSFYKGILMWKDXXXXXXXXXXXXXXSKSSCAARDVVIDPSCEE-------PLLCQ 236
+S ++ G+ WK ++ S R EE PLL
Sbjct: 166 WSSLKTCRSGVKFWK----------LESEIARESGHGRPERGQGQIEEETKNLKAPLLEA 215
Query: 237 PQPKEKSALETFLFNLRWKNILVLMTVWSSFLVLQIFKNNS--------QSCSTFYWVIN 288
K KS + W + VL+ VW+SF V+ + + N + C YW++
Sbjct: 216 QATKNKS-------KIPWTKLGVLVIVWASFFVIYLLRGNKDGKGIITIKPCGVEYWILL 268
Query: 289 ILQVPVALSVFLWEGVQLCRESRARRMDGNWECVCEASIEWSPAQLIFCAFCXXXXXXXX 348
LQ+P+AL ++ + L R + N + E + +L F A
Sbjct: 269 SLQIPLAL---IFTKLALSRTESRQEQSPNDQKNQEGTRLDKSTRLKFPAMSFLAGLLGG 325
Query: 349 XXXXXXXXXXXXXXXXXXXCIPQVASATATXXXXXXXXXXXXEFYFLNRFPIPFAVYLIC 408
PQ+ +AT + ++ L A
Sbjct: 326 IFGIGGGMLISPLLLQSGIP-PQITAATTSFMVFFSATMSAVQYLLLGMQNTDTAYVFSF 384
Query: 409 ISILAGFWGQSLVRKLVHVLKRASLIVFILSSVIFASALTMGVVG 453
I LA G LV+K V RAS+IVF + +V+ S + M G
Sbjct: 385 ICFLASLLGLVLVQKAVAQFGRASIIVFSVGTVMSLSTVLMTSFG 429
>AT1G11540.1 | chr1:3875476-3876973 REVERSE LENGTH=368
Length = 367
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/383 (21%), Positives = 152/383 (39%), Gaps = 33/383 (8%)
Query: 100 LNLLVGFDTKSAAALSKCMIMGASASSVWYNLQVSHP-TKEAPVIDYKLALLFQPMLMLG 158
+ ++ G + K+A++ S M+ G S ++V NL + +P +++ +ID+ LAL QP L+LG
Sbjct: 1 MTIIAGLEMKTASSFSAFMVTGVSFANVGCNLFLRNPKSRDKTLIDFDLALTIQPCLLLG 60
Query: 159 ITIGVELSVIFPYWLITVLIIILFIGTSSRSFYKGILMWKDXXXXXXXXXXXXXXSKSSC 218
++IGV + +FP WL+ L + ++ ++ KG+ W
Sbjct: 61 VSIGVICNRMFPNWLVLFLFAVFLAWSTMKTCKKGVSYWNLESERAKIK----------- 109
Query: 219 AARDVVIDPSCEEPLLCQPQPKEKSALETFLFNLRWKNILVLMTVWSSFLVLQIFKNNS- 277
+ RDV PLL + + + + + W + VL+ +W F + +F+ N
Sbjct: 110 SPRDVDGIEVARSPLLSEEREDVR---QRGMIRFPWMKLGVLVIIWLLFFSINLFRGNKY 166
Query: 278 -------QSCSTFYWVINILQVPV----ALSVFLWEGVQLCRESRARRMDGNWECVCEAS 326
+ C YW ++ LQ+P+ L ++ + VQ S + N E
Sbjct: 167 GQGIISIKPCGALYWFLSSLQIPLTIFFTLCIYFSDNVQSNHTSHS-----NQNSEQETG 221
Query: 327 IEWSPAQLIFCAFCXXXXXXXXXXXXXXXXXXXXXXXXXXXCIPQVASATATXXXXXXXX 386
+ +L+ P+V +AT +
Sbjct: 222 VGGRQNKLMLPVMALLAGVLGGLFGIGGGMLISPLLLQIGIA-PEVTAATCSFMVLFSSS 280
Query: 387 XXXXEFYFLNRFPIPFAVYLICISILAGFWGQSLVRKLVHVLKRASLIVFILSSVIFASA 446
++ L A + +A G +V+K++ RAS+IVF + V+ S
Sbjct: 281 MSAIQYLLLGMEHAGTAAIFALVCFVASLVGLMVVKKVIAKYGRASIIVFAVGIVMALST 340
Query: 447 LTMGVVGTQKSISMINNHEYMGF 469
+ M G + + YMGF
Sbjct: 341 VLMTTHGAFNVWNDFVSGRYMGF 363
>AT4G21260.1 | chr4:11327543-11329057 FORWARD LENGTH=394
Length = 393
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 55/94 (58%), Gaps = 5/94 (5%)
Query: 105 GFDTKSAAALSKCMIMGASASSVWYNLQVSHPTKEAPVIDYKLALLFQPMLMLGITIGVE 164
G D K+A++ S M+ G S +++ +++ +IDY LALL +P ++LG+++GV
Sbjct: 80 GIDLKAASSFSAFMVTGGSIANL-----INNHFGCKKLIDYDLALLLEPCMLLGVSVGVI 134
Query: 165 LSVIFPYWLITVLIIILFIGTSSRSFYKGILMWK 198
+ +FP WLIT L ++ + +S + G WK
Sbjct: 135 CNKVFPEWLITGLFVVFLMWSSMETCENGHTSWK 168
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.328 0.138 0.436
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,746,147
Number of extensions: 251710
Number of successful extensions: 752
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 746
Number of HSP's successfully gapped: 7
Length of query: 475
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 373
Effective length of database: 8,310,137
Effective search space: 3099681101
Effective search space used: 3099681101
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 114 (48.5 bits)