BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0498100 Os08g0498100|AK071482
(252 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os08g0498100 Similar to Caffeoyl-CoA O-methyltransferase 2 ... 437 e-123
Os06g0165800 Similar to Caffeoyl-CoA 3-O-methyltransferase ... 241 3e-64
Os08g0498600 Similar to Caffeoyl-CoA 3-O-methyltransferase ... 226 1e-59
Os09g0481400 Similar to Caffeoyl-CoA O-methyltransferase (E... 226 2e-59
Os08g0498400 Similar to Caffeoyl-CoA 3-O-methyltransferase ... 225 3e-59
Os08g0154000 O-methyltransferase, family 3 protein 147 1e-35
>Os08g0498100 Similar to Caffeoyl-CoA O-methyltransferase 2 (EC 2.1.1.104)
(Trans-caffeoyl-CoA 3-O-methyltransferase 2) (CCoAMT-2)
(CCoAOMT-2)
Length = 252
Score = 437 bits (1123), Expect = e-123, Method: Compositional matrix adjust.
Identities = 219/252 (86%), Positives = 219/252 (86%)
Query: 1 MTTGNGDAPVIKNAHSDIDSTNKTLLKSDALYKYVLDTTVLPREPECMRDLRLITDKHQW 60
MTTGNGDAPVIKNAHSDIDSTNKTLLKSDALYKYVLDTTVLPREPECMRDLRLITDKHQW
Sbjct: 1 MTTGNGDAPVIKNAHSDIDSTNKTLLKSDALYKYVLDTTVLPREPECMRDLRLITDKHQW 60
Query: 61 GFMQSSADEAQLLGMLLKMAGAKRTIEVGVFTGYSLLATALALPEDGKVVAIDPDRESYE 120
GFMQSSADEAQLLGMLLKMAGAKRTIEVGVFTGYSLLATALALPEDGKVVAIDPDRESYE
Sbjct: 61 GFMQSSADEAQLLGMLLKMAGAKRTIEVGVFTGYSLLATALALPEDGKVVAIDPDRESYE 120
Query: 121 IGRPFLEKAGVAHKVDFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPNYVKYHEQ 180
IGRPFLEKAGVAHKVDF KPNYVKYHEQ
Sbjct: 121 IGRPFLEKAGVAHKVDFREGKGLEKLDELLAEEAAAGREAAFDFAFVDADKPNYVKYHEQ 180
Query: 181 LLQLVRVGGHIVYDNTLWAGTVALPPDTPLSDLDRRFSVAIRDLNSRLAADPRIDVCQLA 240
LLQLVRVGGHIVYDNTLWAGTVALPPDTPLSDLDRRFSVAIRDLNSRLAADPRIDVCQLA
Sbjct: 181 LLQLVRVGGHIVYDNTLWAGTVALPPDTPLSDLDRRFSVAIRDLNSRLAADPRIDVCQLA 240
Query: 241 IADGITICRRLV 252
IADGITICRRLV
Sbjct: 241 IADGITICRRLV 252
>Os06g0165800 Similar to Caffeoyl-CoA 3-O-methyltransferase (Fragment)
Length = 260
Score = 241 bits (616), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 117/240 (48%), Positives = 162/240 (67%), Gaps = 5/240 (2%)
Query: 12 KNAHSDIDSTNKTLLKSDALYKYVLDTTVLPREPECMRDLRLITDKHQWGFMQSSADEAQ 71
K HS++ +K+LLKSD LY+Y+L+T+V PRE ECM++LR +T H W M +SADE Q
Sbjct: 25 KTRHSEV--GHKSLLKSDDLYQYILETSVYPREHECMKELREVTANHPWNLMTTSADEGQ 82
Query: 72 LLGMLLKMAGAKRTIEVGVFTGYSLLATALALPEDGKVVAIDPDRESYEIGRPFLEKAGV 131
L +LLK+ GAK+T+E+GV+TGYSLLATALA+P+DG ++A+D +RE+YE+G P +EKAGV
Sbjct: 83 FLNLLLKLIGAKKTMEIGVYTGYSLLATALAIPDDGTILAMDINRENYELGLPSIEKAGV 142
Query: 132 AHKVDFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPNYVKYHEQLLQLVRVGGHI 191
AHK+DF K NY+ YHE+L++LV+VGG +
Sbjct: 143 AHKIDF---REGPALPVLDQLVEEEGNHGSFDFVFVDADKDNYLNYHERLMKLVKVGGLV 199
Query: 192 VYDNTLWAGTVALPPDTPLSDLDRRFSVAIRDLNSRLAADPRIDVCQLAIADGITICRRL 251
YDNTLW G+V LP D P+ R + + +LN LAAD R+++CQL + DGIT+CRR+
Sbjct: 200 GYDNTLWNGSVVLPADAPMRKYIRYYRDFVLELNKALAADHRVEICQLPVGDGITLCRRV 259
>Os08g0498600 Similar to Caffeoyl-CoA 3-O-methyltransferase (Fragment)
Length = 234
Score = 226 bits (576), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 121/231 (52%), Positives = 149/231 (64%), Gaps = 6/231 (2%)
Query: 22 NKTLLKSDALYKYVLDTTVLPREPECMRDLRLITDKHQWGFMQSSADEAQLLGMLLKMAG 81
+ TLLKSD++ +YVLDTTV PRE E +R+LRLIT H FM SS D+ Q +LLKM G
Sbjct: 8 SNTLLKSDSILEYVLDTTVYPREHERLRELRLITQNHPKSFMGSSPDQMQFFSVLLKMIG 67
Query: 82 AKRTIEVGVFTGYSLLATALALPEDGKVVAIDPDRESYEIGRPFLEKAGVAHKVDFXXXX 141
A+ +EVGVFTGYSLLATALALP+DGKVVAID RE YE+GRP +E AGVAHKVDF
Sbjct: 68 ARNAVEVGVFTGYSLLATALALPDDGKVVAIDVSREYYELGRPVIEDAGVAHKVDF---- 123
Query: 142 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPNYVKYHEQLLQLVRVGGHIVYDNTLWAGT 201
K Y YHE+L++L+RVGG + YDNTLW G+
Sbjct: 124 -RHGDGLAVLDQLLAGGEGKFDFAYADADKEQYRGYHERLVRLLRVGGVVAYDNTLWGGS 182
Query: 202 VALPPDTPLSD-LDRRFSVAIRDLNSRLAADPRIDVCQLAIADGITICRRL 251
VA+P DTP S DR + N+ +AAD R++ C L +ADG+T+CRRL
Sbjct: 183 VAMPRDTPGSSAYDRVVRDYMVGFNAMVAADDRVEACLLPVADGVTLCRRL 233
>Os09g0481400 Similar to Caffeoyl-CoA O-methyltransferase (EC 2.1.1.104)
(Trans-caffeoyl-CoA 3- O-methyltransferase) (CCoAMT)
(CCoAOMT)
Length = 258
Score = 226 bits (575), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 121/240 (50%), Positives = 153/240 (63%), Gaps = 18/240 (7%)
Query: 22 NKTLLKSDALYKYVLDTTVLPREPECMRDLRLITDKHQWGFMQSSADEAQLLGMLLKMAG 81
+KTLLKS+ LY+YVL++TV PREP+C+R+LRL T H M +S D+ QL G+L+++
Sbjct: 26 SKTLLKSEPLYQYVLESTVFPREPDCLRELRLATANHPMAVMAASPDQVQLFGLLIELIS 85
Query: 82 AKRTIEVGVFTGYSLLATALALPEDGKVVAIDPDRESY-EIGRPFLEKAGVAHKVDFXXX 140
AK IEVGVFTGYSLLATALALP+DGK+VAID RESY E+G P ++KAGVAHKVDF
Sbjct: 86 AKNAIEVGVFTGYSLLATALALPDDGKIVAIDVSRESYDEVGAPVIDKAGVAHKVDF--- 142
Query: 141 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPNYVKYHEQLLQLVRVGGHIVYDNTLWAG 200
K N++ YHE+LLQLVRVGG I YDNTLW G
Sbjct: 143 RVGLAMPVLDELVAEEGNKGRFDFAFVDADKVNFLGYHERLLQLVRVGGLIAYDNTLWGG 202
Query: 201 TV---------ALPPDTPLSDLDRRFSVAIRDLNSRLAADPRIDVCQLAIADGITICRRL 251
+V A+P S DR + R+ N+ +AAD R+ CQLAIADG+ +CRR+
Sbjct: 203 SVAAPPAAADEAVP-----SGRDRSLAALAREFNAAIAADRRVKPCQLAIADGVMLCRRV 257
>Os08g0498400 Similar to Caffeoyl-CoA 3-O-methyltransferase (Fragment)
Length = 292
Score = 225 bits (573), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 126/263 (47%), Positives = 163/263 (61%), Gaps = 14/263 (5%)
Query: 1 MTTGNGDAPVIKNAHSDIDSTN-----------KTLLKSDALYKYVLDTTVLPREPECMR 49
M NGDA N I S KTLLKS++L++Y+L+T V PRE E MR
Sbjct: 33 MAAANGDASHGANGGIQIQSKEMKTAIHSNDSPKTLLKSESLHEYMLNTMVYPRENEFMR 92
Query: 50 DLRLITDKHQWGFMQSSADEAQLLGMLLKMAGAKRTIEVGVFTGYSLLATALALPEDGKV 109
+LRLIT +H +GFM S +E QLL +LL + GAK TIEVGVFTG S+LATALA+P+DGKV
Sbjct: 93 ELRLITSEHTYGFMSSPPEEGQLLSLLLNLTGAKNTIEVGVFTGCSVLATALAIPDDGKV 152
Query: 110 VAIDPDRESYEIGRPFLEKAGVAHKVDFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 169
VAID RE +++G P ++KAGVAHKVDF
Sbjct: 153 VAIDVSREYFDLGLPVIKKAGVAHKVDF---REGAAMPILDNLLANEENEGKFDFAFVDA 209
Query: 170 XKPNYVKYHEQLLQLVRVGGHIVYDNTLWAGTVALPPDTPLSDLDRRFSVAIRDLNSRLA 229
K NY +YHE+LL+LVR GG + YDNTLW G+VAL D+ L + D+ +I N+++A
Sbjct: 210 DKGNYGEYHERLLRLVRAGGVLAYDNTLWGGSVALEDDSVLEEFDQDIRRSIVAFNAKIA 269
Query: 230 ADPRIDVCQLAIADGITICRRLV 252
DPR++ QL ++DGIT+CRRLV
Sbjct: 270 GDPRVEAVQLPVSDGITLCRRLV 292
>Os08g0154000 O-methyltransferase, family 3 protein
Length = 302
Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 90/230 (39%), Positives = 126/230 (54%), Gaps = 13/230 (5%)
Query: 23 KTLLKSDALYKYVLDTTVLPREPECMRDLRLITDKHQWGFMQSSADEAQLLGMLLKMAGA 82
K L + LY+Y+L RE +++LR T + MQ S +AQLL ML ++ GA
Sbjct: 84 KQLGATTQLYEYLLANV---REHPVLKELREETAAMRGSQMQVSPAQAQLLAMLAQILGA 140
Query: 83 KRTIEVGVFTGYSLLATALALPEDGKVVAIDPDRESYEIGRPFLEKAGVAHKVDFXXXXX 142
+R IEVGV+TGYS LA ALALPE G++VA + D E+ + + +++GVAHKVD
Sbjct: 141 QRCIEVGVYTGYSSLAVALALPESGRLVACERDERCLEVAKKYYQRSGVAHKVDV----K 196
Query: 143 XXXXXXXXXXXXXXXXXXXXXXXXXXXXKPNYVKYHEQLLQLVRVGGHIVYDNTLWAGTV 202
K Y +Y+E LL+LVRVGG IV DN LW G V
Sbjct: 197 HALAADSLKLLIDGGEVNSYDFAFVDADKRMYEEYYELLLKLVRVGGLIVIDNVLWYGRV 256
Query: 203 ALPPDTPLSDLDRRFSVAIRDLNSRLAADPRIDVCQLAIADGITICRRLV 252
A P ++ R +++IR+ N +L D R+ + + I DG+TICR+LV
Sbjct: 257 ADPL------VNDRKTISIRNFNKKLLEDNRVSISMVPIGDGMTICRKLV 300
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.320 0.137 0.405
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 7,405,803
Number of extensions: 255090
Number of successful extensions: 592
Number of sequences better than 1.0e-10: 6
Number of HSP's gapped: 587
Number of HSP's successfully gapped: 11
Length of query: 252
Length of database: 17,035,801
Length adjustment: 98
Effective length of query: 154
Effective length of database: 11,918,829
Effective search space: 1835499666
Effective search space used: 1835499666
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 155 (64.3 bits)