Os08g0498100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Caffeoyl-CoA O-methyltransferase 2 (EC 2.1.1.104) (Trans-caffeoyl-CoA 3-O-methyltransferase 2) (CCoAMT-2) (CCoAOMT-2).
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Os08g0498100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Caffeoyl-CoA O-methyltransferase 2 (EC 2.1.1.104) (Trans-caffeoyl-CoA 3-O-methyltransferase 2) (CCoAMT-2) (CCoAOMT-2).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 223.74 | 0.703 | 12.4 | -0.191 | 1.55 | -0.142 | -1.23 | -8.57 | 0.703 | 6.69 | 14.8 | 338 | -- | -- |
| 245.02 | 0.729 | 12.3 | 1.36 | 1.62 | -1.32 | 1.54 | -- | 0.932 | 6.58 | 34.41 | 832 | -- | -- |
| 226.72 | 0.701 | 12.3 | -0.0534 | 1.56 | -0.134 | -- | -7.8 | 0.744 | 6.8 | 13.74 | 301 | -- | -- |
| 235.79 | 0.715 | 12.2 | 1.41 | 1.55 | -1.45 | -- | -- | 0.994 | 6.32 | 34.66 | 836 | -- | -- |
| 323.49 | 0.838 | 12.3 | 0.232 | -- | -1.58 | -- | -7.74 | 0.998 | -- | 14.7 | 356 | -- | -- |
| 269.35 | 0.769 | 12.2 | 1.08 | 1.67 | -- | 0.571 | -- | 1.03 | 6.69 | -- | -- | -- | -- |
| 270.17 | 0.77 | 12.2 | 1.08 | 1.67 | -- | -- | -- | 1.03 | 6.69 | -- | -- | -- | -- |
| 292.9 | 0.797 | 12.2 | 1.44 | -- | -2.08 | -- | -- | 1.15 | -- | 25.7 | 440 | -- | -- |
| 273.19 | 0.77 | 12.2 | -- | 1.53 | -1.26 | -- | -- | 0.866 | 6.44 | 34.4 | 806 | -- | -- |
| 415.26 | 0.952 | 12.2 | 1.12 | -- | -- | -- | -- | 1.06 | -- | -- | -- | -- | -- |
| 301.16 | 0.812 | 12.2 | -- | 1.68 | -- | -- | -- | 0.906 | 6.65 | -- | -- | -- | -- |
| 346.02 | 0.866 | 12.3 | -- | -- | -1.93 | -- | -- | 0.93 | -- | 26.5 | 438 | -- | -- |
| 448.52 | 0.989 | 12.3 | -- | -- | -- | -- | -- | 0.935 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 219.70 | temperature | 10 | 270 | > th | dose dependent | sin | 19 | NA |
| 3 | 220.56 | temperature | 15 | 90 | > th | dose dependent | sin | 17 | NA |
| 6 | 220.90 | temperature | 15 | 270 | > th | dose dependent | rect. | 12 | 23 |
| 16 | 222.44 | temperature | 10 | 720 | > th | dose dependent | rect. | 7 | 11 |
| 18 | 222.56 | temperature | 30 | 10 | < th | dose dependent | sin | 18 | NA |
| 25 | 223.52 | temperature | 30 | 90 | < th | dose dependent | sin | 19 | NA |
| 35 | 224.41 | temperature | 15 | 270 | > th | dose dependent | rect. | 5 | 23 |
| 41 | 224.80 | temperature | 15 | 270 | > th | dose dependent | no | NA | NA |
| 49 | 225.06 | humidity | 90 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 54 | 225.41 | temperature | 10 | 1440 | > th | dose dependent | rect. | 7 | 5 |
| 66 | 225.86 | temperature | 10 | 1440 | > th | dose dependent | rect. | 10 | 1 |
| 71 | 226.07 | temperature | 30 | 1440 | < th | dose dependent | rect. | 7 | 4 |
| 76 | 226.33 | temperature | 15 | 270 | > th | dose dependent | rect. | 3 | 23 |
| 92 | 226.74 | temperature | 15 | 270 | > th | dose dependent | rect. | 20 | 23 |
| 106 | 227.25 | temperature | 15 | 720 | > th | dose dependent | sin | 0 | NA |
| 109 | 227.30 | temperature | 30 | 270 | < th | dose dependent | rect. | 9 | 13 |
| 121 | 227.51 | wind | 1 | 14400 | > th | dose independent | rect. | 2 | 1 |
| 127 | 227.61 | temperature | 30 | 270 | < th | dose dependent | rect. | 2 | 23 |
| 133 | 227.79 | temperature | 15 | 270 | > th | dose dependent | rect. | 9 | 17 |
| 160 | 228.50 | temperature | 15 | 270 | > th | dose dependent | rect. | 10 | 15 |
| 165 | 228.56 | temperature | 20 | 14400 | < th | dose independent | rect. | 22 | 1 |
| 171 | 228.65 | temperature | 15 | 270 | > th | dose dependent | rect. | 22 | 23 |
| 181 | 228.85 | wind | 1 | 14400 | < th | dose independent | rect. | 2 | 1 |
| 187 | 229.01 | wind | 9 | 43200 | < th | dose independent | rect. | 17 | 15 |
| 193 | 229.18 | temperature | 20 | 14400 | > th | dose independent | rect. | 22 | 1 |
| 199 | 229.21 | wind | 9 | 43200 | < th | dose independent | rect. | 17 | 19 |
| 206 | 229.35 | temperature | 20 | 14400 | < th | dose independent | rect. | 21 | 3 |
| 207 | 229.36 | wind | 9 | 43200 | > th | dose independent | rect. | 17 | 15 |
| 214 | 229.43 | wind | 9 | 43200 | > th | dose dependent | rect. | 16 | 16 |
| 219 | 229.47 | wind | 7 | 43200 | > th | dose dependent | rect. | 19 | 12 |
| 234 | 229.70 | humidity | 90 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 250 | 229.81 | wind | 7 | 43200 | > th | dose independent | rect. | 19 | 13 |
| 253 | 229.86 | wind | 9 | 43200 | > th | dose independent | rect. | 17 | 19 |
| 256 | 229.88 | humidity | 90 | 14400 | > th | dose independent | rect. | 4 | 3 |
| 265 | 229.97 | wind | 9 | 43200 | < th | dose independent | sin | 11 | NA |
| 275 | 230.06 | wind | 9 | 43200 | > th | dose independent | sin | 11 | NA |
| 287 | 230.14 | temperature | 20 | 14400 | > th | dose independent | rect. | 21 | 3 |
| 294 | 230.17 | wind | 7 | 43200 | < th | dose independent | rect. | 19 | 13 |
| 296 | 230.18 | humidity | 80 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 298 | 230.20 | temperature | 30 | 10 | < th | dose dependent | rect. | 8 | 16 |
| 308 | 230.27 | wind | 7 | 43200 | > th | dose dependent | rect. | 17 | 19 |
| 312 | 230.30 | temperature | 20 | 14400 | > th | dose independent | rect. | 19 | 8 |
| 322 | 230.40 | temperature | 20 | 14400 | < th | dose independent | rect. | 20 | 7 |
| 333 | 230.47 | humidity | 60 | 720 | < th | dose dependent | rect. | 15 | 2 |
| 338 | 230.50 | temperature | 20 | 14400 | < th | dose independent | rect. | 18 | 10 |
| 352 | 230.56 | wind | 7 | 43200 | > th | dose dependent | sin | 10 | NA |
| 360 | 230.59 | temperature | 20 | 14400 | > th | dose independent | sin | 14 | NA |
| 366 | 230.61 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 380 | 230.66 | temperature | 20 | 14400 | > th | dose independent | rect. | 19 | 16 |
| 418 | 230.79 | temperature | 20 | 14400 | < th | dose independent | sin | 14 | NA |
| 435 | 230.81 | temperature | 25 | 10 | > th | dose dependent | sin | 12 | NA |
| 455 | 230.88 | temperature | 20 | 14400 | < th | dose independent | rect. | 18 | 16 |
| 563 | 231.06 | temperature | 20 | 14400 | > th | dose independent | rect. | 6 | 22 |
| 658 | 231.20 | temperature | 30 | 270 | < th | dose dependent | rect. | 15 | 23 |
| 682 | 231.25 | humidity | 60 | 720 | < th | dose independent | rect. | 15 | 2 |
| 698 | 231.27 | temperature | 20 | 14400 | > th | dose independent | rect. | 2 | 23 |
| 701 | 231.27 | wind | 7 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 703 | 231.28 | temperature | 20 | 14400 | > th | dose independent | no | NA | NA |
| 755 | 231.34 | wind | 1 | 43200 | < th | dose dependent | rect. | 2 | 1 |
| 768 | 231.36 | temperature | 30 | 270 | < th | dose dependent | rect. | 17 | 23 |
| 858 | 231.49 | humidity | 60 | 720 | > th | dose independent | rect. | 9 | 12 |
| 927 | 231.59 | temperature | 20 | 14400 | < th | dose independent | no | NA | NA |
| 938 | 231.62 | humidity | 90 | 14400 | < th | dose independent | rect. | 3 | 4 |
| 967 | 231.66 | temperature | 20 | 14400 | < th | dose independent | rect. | 2 | 23 |
| 992 | 231.71 | temperature | 10 | 4320 | > th | dose dependent | rect. | 8 | 16 |