BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0498100 Os08g0498100|AK071482
(252 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G34050.1 | chr4:16310844-16311973 FORWARD LENGTH=260 245 1e-65
AT4G26220.1 | chr4:13284179-13285146 FORWARD LENGTH=233 221 2e-58
AT1G67980.1 | chr1:25487724-25488934 FORWARD LENGTH=233 196 1e-50
AT1G67990.1 | chr1:25489494-25490749 FORWARD LENGTH=234 177 4e-45
AT1G24735.2 | chr1:8757977-8759448 FORWARD LENGTH=292 174 4e-44
AT3G61990.1 | chr3:22957318-22958910 REVERSE LENGTH=291 145 2e-35
AT3G62000.2 | chr3:22959223-22961180 REVERSE LENGTH=353 132 1e-31
>AT4G34050.1 | chr4:16310844-16311973 FORWARD LENGTH=260
Length = 259
Score = 245 bits (626), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 117/230 (50%), Positives = 156/230 (67%), Gaps = 3/230 (1%)
Query: 22 NKTLLKSDALYKYVLDTTVLPREPECMRDLRLITDKHQWGFMQSSADEAQLLGMLLKMAG 81
+K+LL+SD LY+Y+L+T+V PREPE M++LR +T KH W M +SADE Q L ML+K+
Sbjct: 32 HKSLLQSDDLYQYILETSVYPREPESMKELREVTAKHPWNIMTTSADEGQFLNMLIKLVN 91
Query: 82 AKRTIEVGVFTGYSLLATALALPEDGKVVAIDPDRESYEIGRPFLEKAGVAHKVDFXXXX 141
AK T+E+GV+TGYSLLATALALPEDGK++A+D +RE+YE+G P +EKAGVAHK+DF
Sbjct: 92 AKNTMEIGVYTGYSLLATALALPEDGKILAMDVNRENYELGLPIIEKAGVAHKIDF---R 148
Query: 142 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPNYVKYHEQLLQLVRVGGHIVYDNTLWAGT 201
K NY+ YH++L+ LV++GG I YDNTLW G+
Sbjct: 149 EGPALPVLDEIVADEKNHGTYDFIFVDADKDNYINYHKRLIDLVKIGGVIGYDNTLWNGS 208
Query: 202 VALPPDTPLSDLDRRFSVAIRDLNSRLAADPRIDVCQLAIADGITICRRL 251
V PPD P+ R + + +LN LAADPRI++C L + DGITICRR+
Sbjct: 209 VVAPPDAPMRKYVRYYRDFVLELNKALAADPRIEICMLPVGDGITICRRI 258
>AT4G26220.1 | chr4:13284179-13285146 FORWARD LENGTH=233
Length = 232
Score = 221 bits (564), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 115/229 (50%), Positives = 147/229 (64%), Gaps = 4/229 (1%)
Query: 23 KTLLKSDALYKYVLDTTVLPREPECMRDLRLITDKHQWGFMQSSADEAQLLGMLLKMAGA 82
K LLKS+ LYKY+L+T+V PREPE +R+LR IT H M ++ D QL+GMLL + A
Sbjct: 7 KGLLKSEELYKYILETSVYPREPEVLRELRNITHNHPQAGMATAPDAGQLMGMLLNLVNA 66
Query: 83 KRTIEVGVFTGYSLLATALALPEDGKVVAIDPDRESYEIGRPFLEKAGVAHKVDFXXXXX 142
++TIEVGVFTGYSLL TAL LPEDGKV+AID +R+SYEIG P ++KAGV HK+DF
Sbjct: 67 RKTIEVGVFTGYSLLLTALTLPEDGKVIAIDMNRDSYEIGLPVIKKAGVEHKIDF---KE 123
Query: 143 XXXXXXXXXXXXXXXXXXXXXXXXXXXXKPNYVKYHEQLLQLVRVGGHIVYDNTLWAGTV 202
K NY YHE+L++L++VGG IVYDNTLW G+V
Sbjct: 124 SEALPALDELLNNKVNEGGFDFAFVDADKLNYWNYHERLIRLIKVGGIIVYDNTLWGGSV 183
Query: 203 ALPPDTPLSDLDRRFSVAIRDLNSRLAADPRIDVCQLAIADGITICRRL 251
A PD+ + A +LN +L+AD R+ + Q A+ DGITICRRL
Sbjct: 184 A-EPDSSTPEWRIEVKKATLELNKKLSADQRVQISQAALGDGITICRRL 231
>AT1G67980.1 | chr1:25487724-25488934 FORWARD LENGTH=233
Length = 232
Score = 196 bits (498), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 103/232 (44%), Positives = 143/232 (61%), Gaps = 9/232 (3%)
Query: 23 KTLLKSDALYKYVLDTTVLPREPECMRDLRLITDKHQWGF--MQSSADEAQLLGMLLKMA 80
K +LKS+AL +Y+++T+ PRE E +++LR T + M+ DE L ML+K+
Sbjct: 8 KGILKSEALKQYIMETSAYPREHELLKELRKATVQKYGNLSEMEVPVDEGHFLSMLVKIM 67
Query: 81 GAKRTIEVGVFTGYSLLATALALPEDGKVVAIDPDRESYEIGRPFLEKAGVAHKVDFXXX 140
AK TIE+GVFTGYSLL TALALPEDG++ AID D+E+YE+G F++KAGV HK++F
Sbjct: 68 NAKNTIEIGVFTGYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINF--- 124
Query: 141 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPNYVKYHEQLLQLVRVGGHIVYDNTLWAG 200
K +YV +HE+LL+LV+VGG I +DNTLW G
Sbjct: 125 ---IHSDGLKALDQLVNDKCEFDFAFADADKSSYVNFHERLLKLVKVGGIIAFDNTLWFG 181
Query: 201 TVALPPDTPLSDLDRRFSVAIRDLNSRLAADPRIDVCQLAIADGITICRRLV 252
VA D + R + A+ + N +LA DPR++V Q++I DGIT+CRRLV
Sbjct: 182 FVAEDEDGVPEHM-REYRAALIEFNKKLALDPRVEVSQISIGDGITLCRRLV 232
>AT1G67990.1 | chr1:25489494-25490749 FORWARD LENGTH=234
Length = 233
Score = 177 bits (450), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 95/233 (40%), Positives = 138/233 (59%), Gaps = 8/233 (3%)
Query: 22 NKTLLKSDALYKYVLDTTVLPREPECMRDLRLITDKHQWGF--MQSSADEAQLLGMLLKM 79
+K +LKS+AL +Y+++TT PRE E +++LR T + M DE+ L ML+K+
Sbjct: 7 DKGILKSEALKQYIMETTAYPREHELLKELREATIQRYGNLSEMGVPVDESLFLSMLVKI 66
Query: 80 AGAKRTIEVGVFTGYSLLATALALPEDGKVVAIDPDRESYEIGRPFLEKAGVAHKVDFXX 139
AK TIE+GVFTGYSL ALALPEDG++ AID D+ Y +G F++KAGV HK++F
Sbjct: 67 INAKNTIEIGVFTGYSLFTVALALPEDGRITAIDIDQAGYNLGLEFMKKAGVDHKINF-- 124
Query: 140 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPNYVKYHEQLLQLVRVGGHIVYDNTLWA 199
K NYV + E+LL+LV+VGG I +DNTLW
Sbjct: 125 ---IQSDAVRGLDQLLNGEKQEYDFAFVDADKTNYVYFLEKLLKLVKVGGIIAFDNTLWF 181
Query: 200 GTVALPPDTPLSDLDRRFSVAIRDLNSRLAADPRIDVCQLAIADGITICRRLV 252
GT+ + + + R + A+ + N LA DPR+++ Q++I DG+T+CRRL+
Sbjct: 182 GTL-IQKENEVPGHMRAYREALLEFNKILARDPRVEIAQISIGDGLTLCRRLI 233
>AT1G24735.2 | chr1:8757977-8759448 FORWARD LENGTH=292
Length = 291
Score = 174 bits (441), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 109/283 (38%), Positives = 144/283 (50%), Gaps = 62/283 (21%)
Query: 25 LLKSDALYKYVLDTTVLPREPECMRDLR-------------LITDK-------------- 57
+LKSDAL KY+ +TT PRE E ++ LR L+ D
Sbjct: 16 ILKSDALKKYIFETTAYPREHEQLKKLREATVLKYGNLYTVLLYDHTLILSNNNCKYHNV 75
Query: 58 ----------HQW----------------GFMQSSADEAQLLGMLLKMAGAKRTIEVGVF 91
HQ+ M+ DE L MLLK+ AK+TIE+GVF
Sbjct: 76 TTLDPTKYVYHQFKDYTSNEKMVCACMRRSEMEVPVDEGHFLSMLLKIMNAKKTIELGVF 135
Query: 92 TGYSLLATALALPEDGKVVAIDPDRESYEIGRPFLEKAGVAHKVDFXXXXXXXXXXXXXX 151
TGYSLL TALALP DG V ID D+E+YE+G F++ AGV HK++F
Sbjct: 136 TGYSLLTTALALPHDGHVTGIDIDKEAYEMGLEFIKNAGVHHKINF----IHSDCLQALD 191
Query: 152 XXXXXXXXXXXXXXXXXXXKPNYVKYHEQLLQLVRVGGHIVYDNTLWAGTVALPPDT-PL 210
KPNY HE+L++LV+VGG I +DNTLW+G VA + P+
Sbjct: 192 NMLSENPKPEFDFAFVDADKPNYANMHERLMKLVKVGGVIAFDNTLWSGFVAEKEENVPV 251
Query: 211 S-DLDRRFSVAIRDLNSRLAADPRIDVCQLAIADGITICRRLV 252
++R+ A DLN RLAADP ++V Q++I DG+T+CRRLV
Sbjct: 252 HMRVNRK---AFLDLNKRLAADPHVEVSQVSIGDGVTLCRRLV 291
>AT3G61990.1 | chr3:22957318-22958910 REVERSE LENGTH=291
Length = 290
Score = 145 bits (366), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/220 (40%), Positives = 122/220 (55%), Gaps = 16/220 (7%)
Query: 31 LYKYVLDTTVLPREPECMRDLRLITDKHQWGFMQSSADEAQLLGMLLKMAGAKRTIEVGV 90
LY YVL+ RE E ++ LR T Q +Q S D+AQLL ML+++ GAKR IEVGV
Sbjct: 86 LYDYVLNNV---REHEILKQLREETAISQ---IQVSPDQAQLLAMLVEILGAKRCIEVGV 139
Query: 91 FTGYSLLATALALPEDGKVVAIDPDRESYEIGRPFLEKAGVAHKVDFXXXXXXXXXXXXX 150
+TGYS LA AL LPE G++VA D D + E+ + + E AGV+HKV
Sbjct: 140 YTGYSSLAVALVLPESGRLVACDKDANALEVAKRYYELAGVSHKV----TVKHGLAAESL 195
Query: 151 XXXXXXXXXXXXXXXXXXXXKPNYVKYHEQLLQLVRVGGHIVYDNTLWAGTVALPPDTPL 210
K Y +Y E LL+LVRVGG IV DN LW G VA D+ +
Sbjct: 196 MSMIQNGEESSYDFAFLDADKAMYQEYFESLLRLVRVGGVIVIDNVLWHGWVA---DSTV 252
Query: 211 SDLDRRFSVAIRDLNSRLAADPRIDVCQLAIADGITICRR 250
+D ++++R+ N +L D R+ + ++I DG+TICR+
Sbjct: 253 ND---ERTISLRNFNKKLMDDQRVSISMVSIGDGMTICRK 289
>AT3G62000.2 | chr3:22959223-22961180 REVERSE LENGTH=353
Length = 352
Score = 132 bits (333), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/210 (39%), Positives = 110/210 (52%), Gaps = 13/210 (6%)
Query: 31 LYKYVLDTTVLPREPECMRDLRLITDKHQWGFMQSSADEAQLLGMLLKMAGAKRTIEVGV 90
LY YVL REP+ +R LR T K + MQ S D+AQLL ML++M A+R IEVGV
Sbjct: 71 LYDYVLSNV---REPKILRQLREETSKMRGSQMQVSPDQAQLLAMLVQMLAAERCIEVGV 127
Query: 91 FTGYSLLATALALPEDGKVVAIDPDRESYEIGRPFLEKAGVAHKVDFXXXXXXXXXXXXX 150
+TGYS LA AL LPE G +VA + D S E+ + + E AGV+HKV+
Sbjct: 128 YTGYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNV----KQGLAAESL 183
Query: 151 XXXXXXXXXXXXXXXXXXXXKPNYVKYHEQLLQLVRVGGHIVYDNTLWAGTVALPPDTPL 210
K Y Y E LLQLVRVGG IV DN LW G V+ P
Sbjct: 184 KSMIQNGEGASYDFAFVDADKRMYQDYFELLLQLVRVGGVIVMDNVLWHGRVSDPM---- 239
Query: 211 SDLDRRFSVAIRDLNSRLAADPRIDVCQLA 240
++ +++IR+ N +L D R+ + ++
Sbjct: 240 --VNDAKTISIRNFNKKLMDDKRVSISMVS 267
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.320 0.137 0.405
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,633,873
Number of extensions: 159340
Number of successful extensions: 418
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 410
Number of HSP's successfully gapped: 13
Length of query: 252
Length of database: 11,106,569
Length adjustment: 96
Effective length of query: 156
Effective length of database: 8,474,633
Effective search space: 1322042748
Effective search space used: 1322042748
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 110 (47.0 bits)