Os08g0498600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Caffeoyl-CoA 3-O-methyltransferase (Fragment).
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Os08g0498600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Caffeoyl-CoA 3-O-methyltransferase (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 173.73 | 0.619 | 5.83 | 1.14 | 0.633 | 1.12 | -0.824 | -4.23 | -0.697 | 16.8 | 0.1959 | 1300 | -- | -- |
| 185.33 | 0.634 | 5.83 | 1.51 | 0.689 | 1.78 | -0.865 | -- | -0.684 | 17.2 | 0.1791 | 1377 | -- | -- |
| 174.97 | 0.616 | 5.83 | 1.12 | 0.609 | 1.2 | -- | -4.14 | -0.679 | 16.4 | 0.2 | 1278 | -- | -- |
| 186.84 | 0.637 | 5.82 | 1.46 | 0.663 | 1.89 | -- | -- | -0.681 | 16.4 | 0.17 | 1351 | -- | -- |
| 185.38 | 0.634 | 5.8 | 1.2 | -- | 1.35 | -- | -4.52 | -0.658 | -- | 0.19 | 2325 | -- | -- |
| 213.98 | 0.686 | 5.74 | 1.87 | 0.729 | -- | -1.63 | -- | -0.446 | 18.8 | -- | -- | -- | -- |
| 220.26 | 0.695 | 5.74 | 1.9 | 0.733 | -- | -- | -- | -0.449 | 18.3 | -- | -- | -- | -- |
| 196.82 | 0.653 | 5.82 | 1.54 | -- | 1.84 | -- | -- | -0.683 | -- | 0.18 | 3639 | -- | -- |
| 232.1 | 0.71 | 5.82 | -- | 0.682 | 2.59 | -- | -- | -0.852 | 16.2 | 0.001894 | 1374 | -- | -- |
| 248.16 | 0.736 | 5.73 | 1.88 | -- | -- | -- | -- | -0.464 | -- | -- | -- | -- | -- |
| 314.96 | 0.83 | 5.79 | -- | 0.707 | -- | -- | -- | -0.66 | 18.4 | -- | -- | -- | -- |
| 244.53 | 0.728 | 5.82 | -- | -- | 2.37 | -- | -- | -0.851 | -- | 0.005142 | 5087 | -- | -- |
| 340.98 | 0.862 | 5.78 | -- | -- | -- | -- | -- | -0.673 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 176.73 | temperature | 25 | 720 | < th | dose dependent | rect. | 24 | 19 |
| 2 | 176.81 | radiation | 1 | 1440 | < th | dose dependent | rect. | 7 | 22 |
| 3 | 176.85 | radiation | 1 | 1440 | < th | dose dependent | rect. | 7 | 17 |
| 4 | 176.87 | radiation | 1 | 1440 | < th | dose dependent | rect. | 7 | 12 |
| 6 | 176.87 | radiation | 1 | 1440 | < th | dose dependent | rect. | 7 | 15 |
| 25 | 177.63 | radiation | 1 | 4320 | < th | dose dependent | rect. | 15 | 3 |
| 35 | 177.69 | wind | 7 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 48 | 177.80 | wind | 7 | 14400 | < th | dose independent | rect. | 14 | 4 |
| 55 | 178.01 | wind | 7 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 56 | 178.03 | temperature | 25 | 1440 | < th | dose independent | rect. | 14 | 4 |
| 68 | 178.39 | wind | 7 | 14400 | > th | dose independent | rect. | 14 | 4 |
| 73 | 178.48 | radiation | 1 | 1440 | < th | dose dependent | rect. | 17 | 23 |
| 74 | 178.49 | radiation | 1 | 1440 | < th | dose dependent | sin | 23 | NA |
| 80 | 178.64 | radiation | 1 | 4320 | < th | dose dependent | rect. | 15 | 1 |
| 89 | 178.71 | radiation | 1 | 1440 | < th | dose dependent | rect. | 12 | 23 |
| 96 | 178.76 | radiation | 1 | 1440 | < th | dose dependent | rect. | 3 | 21 |
| 98 | 178.77 | radiation | 1 | 1440 | < th | dose dependent | rect. | 3 | 16 |
| 100 | 178.77 | radiation | 1 | 1440 | < th | dose dependent | rect. | 3 | 19 |
| 129 | 178.82 | radiation | 1 | 1440 | < th | dose dependent | rect. | 22 | 21 |
| 134 | 178.83 | radiation | 1 | 1440 | < th | dose dependent | no | NA | NA |
| 145 | 178.84 | temperature | 25 | 1440 | > th | dose independent | rect. | 14 | 4 |
| 159 | 178.94 | radiation | 1 | 4320 | < th | dose dependent | rect. | 14 | 10 |
| 171 | 178.98 | radiation | 1 | 4320 | < th | dose dependent | rect. | 14 | 12 |
| 173 | 178.99 | radiation | 1 | 1440 | > th | dose independent | rect. | 7 | 12 |
| 185 | 178.99 | radiation | 1 | 4320 | < th | dose dependent | rect. | 14 | 14 |
| 188 | 179.01 | radiation | 1 | 1440 | < th | dose independent | rect. | 7 | 17 |
| 189 | 179.02 | radiation | 1 | 1440 | < th | dose independent | rect. | 7 | 12 |
| 202 | 179.07 | radiation | 1 | 1440 | < th | dose independent | rect. | 7 | 21 |
| 228 | 179.28 | wind | 5 | 14400 | > th | dose dependent | rect. | 14 | 2 |
| 240 | 179.34 | temperature | 25 | 720 | < th | dose dependent | sin | 2 | NA |
| 250 | 179.41 | radiation | 1 | 4320 | > th | dose independent | rect. | 14 | 5 |
| 267 | 179.47 | wind | 5 | 14400 | > th | dose dependent | rect. | 14 | 4 |
| 281 | 179.54 | radiation | 1 | 4320 | > th | dose independent | rect. | 15 | 1 |
| 282 | 179.54 | wind | 5 | 14400 | > th | dose independent | rect. | 13 | 9 |
| 284 | 179.54 | wind | 5 | 14400 | > th | dose dependent | rect. | 14 | 7 |
| 294 | 179.60 | radiation | 1 | 4320 | < th | dose independent | rect. | 15 | 1 |
| 371 | 179.95 | wind | 5 | 14400 | < th | dose independent | rect. | 13 | 9 |
| 413 | 180.05 | radiation | 1 | 4320 | < th | dose independent | rect. | 14 | 4 |
| 465 | 180.23 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 1 |
| 531 | 180.57 | radiation | 1 | 1440 | > th | dose independent | sin | 22 | NA |
| 533 | 180.58 | radiation | 1 | 4320 | > th | dose independent | sin | 16 | NA |
| 535 | 180.58 | radiation | 1 | 4320 | < th | dose independent | rect. | 14 | 10 |
| 540 | 180.59 | radiation | 1 | 4320 | < th | dose independent | rect. | 14 | 8 |
| 550 | 180.63 | radiation | 1 | 4320 | < th | dose independent | rect. | 14 | 14 |
| 553 | 180.65 | radiation | 1 | 1440 | < th | dose independent | sin | 22 | NA |
| 602 | 180.81 | temperature | 25 | 720 | < th | dose dependent | rect. | 16 | 22 |
| 668 | 180.97 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 18 |
| 674 | 181.01 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 676 | 181.01 | temperature | 20 | 270 | > th | dose dependent | rect. | 5 | 7 |
| 723 | 181.10 | temperature | 25 | 1440 | < th | dose dependent | rect. | 16 | 3 |
| 874 | 181.51 | temperature | 25 | 720 | < th | dose dependent | rect. | 11 | 23 |
| 895 | 181.58 | temperature | 25 | 720 | < th | dose dependent | rect. | 9 | 23 |
| 944 | 181.73 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 20 |
| 946 | 181.74 | radiation | 1 | 4320 | < th | dose independent | sin | 17 | NA |