Os08g0154000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : O-methyltransferase, family 3 protein.
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Os08g0154000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : O-methyltransferase, family 3 protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 74.22 | 0.405 | 9.73 | -0.765 | 1.52 | 0.797 | 0.0578 | 3 | -0.755 | 19.4 | 30.79 | 291 | -- | -- |
| 83.09 | 0.425 | 9.72 | -0.757 | 1.48 | 0.673 | -0.123 | -- | -0.752 | 19.4 | 28.85 | 340 | -- | -- |
| 74.23 | 0.401 | 9.73 | -0.765 | 1.52 | 0.798 | -- | 3 | -0.755 | 19.4 | 31.03 | 292 | -- | -- |
| 82.61 | 0.423 | 9.72 | -0.798 | 1.46 | 0.652 | -- | -- | -0.759 | 19.4 | 30 | 396 | -- | -- |
| 125.89 | 0.523 | 9.69 | -0.736 | -- | 1.73 | -- | 3.24 | -0.849 | -- | -0.01441 | 789 | -- | -- |
| 88.92 | 0.442 | 9.72 | -0.779 | 1.65 | -- | 0.327 | -- | -0.717 | 18.9 | -- | -- | -- | -- |
| 89.19 | 0.442 | 9.72 | -0.785 | 1.65 | -- | -- | -- | -0.716 | 18.9 | -- | -- | -- | -- |
| 118.44 | 0.507 | 9.72 | -0.92 | -- | 1.76 | -- | -- | -0.924 | -- | -0.4182 | 785 | -- | -- |
| 99.71 | 0.465 | 9.7 | -- | 1.48 | 0.621 | -- | -- | -0.673 | 19.3 | 35 | 393 | -- | -- |
| 231.44 | 0.711 | 9.68 | -0.82 | -- | -- | -- | -- | -0.747 | -- | -- | -- | -- | -- |
| 105.45 | 0.48 | 9.7 | -- | 1.66 | -- | -- | -- | -0.629 | 18.9 | -- | -- | -- | -- |
| 140.67 | 0.552 | 9.7 | -- | -- | 1.72 | -- | -- | -0.819 | -- | -2.971 | 786 | -- | -- |
| 249.19 | 0.737 | 9.66 | -- | -- | -- | -- | -- | -0.656 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 66.60 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 8 | 8 |
| 2 | 66.79 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 9 | 10 |
| 16 | 68.35 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 9 | 10 |
| 24 | 68.88 | temperature | 25.0 | 270 | > th | dose independent | rect. | 8 | 9 |
| 68 | 70.57 | temperature | 25.0 | 270 | > th | dose dependent | sin | 3 | NA |
| 75 | 70.67 | temperature | 20.0 | 90 | > th | dose dependent | sin | 23 | NA |
| 123 | 71.30 | temperature | 20.0 | 10 | > th | dose dependent | sin | 22 | NA |
| 126 | 71.32 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 9 | 19 |
| 242 | 72.00 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 8 | 3 |
| 347 | 72.92 | temperature | 25.0 | 720 | > th | dose independent | rect. | 8 | 3 |
| 372 | 73.20 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 2 | 17 |
| 434 | 73.44 | radiation | 30.0 | 270 | > th | dose dependent | rect. | 13 | 23 |
| 444 | 73.53 | temperature | 25.0 | 270 | > th | dose independent | sin | 1 | NA |
| 520 | 73.97 | radiation | 30.0 | 270 | > th | dose dependent | sin | 4 | NA |
| 595 | 74.24 | radiation | 40.0 | 270 | < th | dose independent | rect. | 9 | 23 |
| 620 | 74.29 | radiation | 30.0 | 270 | > th | dose dependent | no | NA | NA |
| 621 | 74.29 | radiation | 30.0 | 270 | > th | dose dependent | rect. | 7 | 9 |
| 750 | 74.30 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 4 | 15 |
| 829 | 74.51 | radiation | 40.0 | 270 | < th | dose independent | rect. | 11 | 23 |
| 898 | 74.62 | temperature | 25.0 | 90 | > th | dose dependent | no | NA | NA |
| 932 | 74.69 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 6 | 17 |
| 991 | 74.82 | radiation | 40.0 | 270 | > th | dose independent | rect. | 13 | 23 |
| 992 | 74.82 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 2 |