BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0193600 Os08g0193600|Os08g0193600
(484 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os08g0193600 Cyclin-like F-box domain containing protein 786 0.0
Os08g0193900 Cyclin-like F-box domain containing protein 456 e-128
Os08g0195800 Cyclin-like F-box domain containing protein 268 8e-72
Os08g0196200 Leucine-rich repeat 2 containing protein 239 5e-63
Os02g0317300 Cyclin-like F-box domain containing protein 218 1e-56
Os02g0317500 Cyclin-like F-box domain containing protein 202 5e-52
Os08g0193300 138 1e-32
Os08g0195200 117 2e-26
Os11g0637300 Cyclin-like F-box domain containing protein 110 2e-24
Os08g0195900 107 2e-23
Os08g0194000 106 5e-23
Os08g0191300 104 1e-22
Os08g0193200 Cyclin-like F-box domain containing protein 102 8e-22
Os08g0195000 98 1e-20
Os08g0194100 97 3e-20
Os08g0193500 Cyclin-like F-box domain containing protein 89 5e-18
>Os08g0193600 Cyclin-like F-box domain containing protein
Length = 484
Score = 786 bits (2029), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/484 (83%), Positives = 403/484 (83%)
Query: 1 MPYDPLPDILRKLRDAQSAAALSXXXXXXXXXXXXLATPSFPTTTDTASXXXXXXXXXXX 60
MPYDPLPDILRKLRDAQSAAALS LATPSFPTTTDTAS
Sbjct: 1 MPYDPLPDILRKLRDAQSAAALSNPNPPEPQPQPQLATPSFPTTTDTASRRRRRRRRRGR 60
Query: 61 XXXHDPQPEAEVEEDTTDRAELELPYDPLPDILREFXXXXXXXXXXXXXXXXXXXXXXXT 120
HDPQPEAEVEEDTTDRAELELPYDPLPDILREF T
Sbjct: 61 GNRHDPQPEAEVEEDTTDRAELELPYDPLPDILREFRLAPRAAALPSPNPNPNPAIPSST 120
Query: 121 TSXXXXXXXXXXXXXXXDWAAGLPREAILAVLRKLDHMEILMGAGQVCRAWRRAARDDPQ 180
TS DWAAGLPREAILAVLRKLDHMEILMGAGQVCRAWRRAARDDPQ
Sbjct: 121 TSRRRRRRGRGRGRGRRDWAAGLPREAILAVLRKLDHMEILMGAGQVCRAWRRAARDDPQ 180
Query: 181 LWRRIDMLNHAELSFELNLFGMAQAAVRRSAGQCEAFWGEYAPTKICSISSEIATIIYSQ 240
LWRRIDMLNHAELSFELNLFGMAQAAVRRSAGQCEAFWGEYAPTKICSISSEIATIIYSQ
Sbjct: 181 LWRRIDMLNHAELSFELNLFGMAQAAVRRSAGQCEAFWGEYAPTKICSISSEIATIIYSQ 240
Query: 241 MTGLWGDAAMIIRFLTIVYEKRAPCLKSLRLISCFDILDEGFSAAVKKFPLLEELELTLC 300
MTGLWGDAAMIIRFLTIVYEKRAPCLKSLRLISCFDILDEGFSAAVKKFPLLEELELTLC
Sbjct: 241 MTGLWGDAAMIIRFLTIVYEKRAPCLKSLRLISCFDILDEGFSAAVKKFPLLEELELTLC 300
Query: 301 DNLGENDVFKAVGKACPQLKRFRLSKRCFYNYKHSGYNKDEQALGIATMHELSSLQLFAN 360
DNLGENDVFKAVGKACPQLKRFRLSKRCFYNYKHSGYNKDEQALGIATMHELSSLQLFAN
Sbjct: 301 DNLGENDVFKAVGKACPQLKRFRLSKRCFYNYKHSGYNKDEQALGIATMHELSSLQLFAN 360
Query: 361 NLSNEGLTAILDNCPFLESLDIRHCFNVSMDDTLQAKCARIKTLRLPYDSTDDYDFQVHK 420
NLSNEGLTAILDNCPFLESLDIRHCFNVSMDDTLQAKCARIKTLRLPYDSTDDYDFQVHK
Sbjct: 361 NLSNEGLTAILDNCPFLESLDIRHCFNVSMDDTLQAKCARIKTLRLPYDSTDDYDFQVHK 420
Query: 421 PIWSGAXXXXXXXXXCIYGGPDYILDSDEYDDYCDPYIYLDGVYXXXXXXXXRMMLKAMH 480
PIWSGA CIYGGPDYILDSDEYDDYCDPYIYLDGVY RMMLKAMH
Sbjct: 421 PIWSGADFFSDSDDDCIYGGPDYILDSDEYDDYCDPYIYLDGVYEDELDEEDRMMLKAMH 480
Query: 481 MFLK 484
MFLK
Sbjct: 481 MFLK 484
>Os08g0193900 Cyclin-like F-box domain containing protein
Length = 396
Score = 456 bits (1174), Expect = e-128, Method: Compositional matrix adjust.
Identities = 235/327 (71%), Positives = 263/327 (80%), Gaps = 29/327 (8%)
Query: 138 DWAAGLPREAILAVLRKLDHMEILMGAGQVCRAWRRAARDDPQLWRRIDMLNHAELSFEL 197
DWA GLP +AILA+ KLDH+EILMGAGQVCR+WRRAARD+PQLWRRIDM HA+LSFEL
Sbjct: 90 DWAGGLPLDAILAIFHKLDHIEILMGAGQVCRSWRRAARDEPQLWRRIDMRGHADLSFEL 149
Query: 198 NLFGMAQAAVRRSAGQCEAFWGEYAPTKICSISSEIATIIYSQMTGLWGDAAMIIRFLTI 257
NLFGMAQAAVRRSAGQCEAFWGEYA + ++ FL
Sbjct: 150 NLFGMAQAAVRRSAGQCEAFWGEYAADE------------------------KLLHFLG- 184
Query: 258 VYEKRAPCLKSLRLISCFDILDEGFSAAVKKFPLLEELELTLCDNLGENDVFKAVGKACP 317
+RAP +KSLRLISC+DIL+EGFSAA+KKFPLLEELEL+LC N+GE++VF+ VGKACP
Sbjct: 185 ---ERAPSVKSLRLISCYDILNEGFSAAIKKFPLLEELELSLCSNIGESNVFEIVGKACP 241
Query: 318 QLKRFRLSKRCFYNYKHSGYNKDEQALGIATMHELSSLQLFANNLSNEGLTAILDNCPFL 377
QLKRFR SK CFY+++ + Y DE+ALGIATMHEL SLQLFANNL NEGL AILDNCP+L
Sbjct: 242 QLKRFRFSKDCFYSFEDNEYEMDEEALGIATMHELRSLQLFANNLRNEGLAAILDNCPYL 301
Query: 378 ESLDIRHCFNVSMDDTLQAKCARIKTLRLPYDSTDDYDFQVHKPIWSGAXXXXXXXXXCI 437
ESLDIRHCFNV+MDDTL+AKCARIKTLRLPYDSTDDYDFQV KPI S A C+
Sbjct: 302 ESLDIRHCFNVNMDDTLRAKCARIKTLRLPYDSTDDYDFQVQKPI-SLADFYSDSDDDCV 360
Query: 438 YGGPDYILDSDEYDDYCDPYIYLDGVY 464
YGGPDYILDSDEYDDYCDPY YLDGVY
Sbjct: 361 YGGPDYILDSDEYDDYCDPYRYLDGVY 387
>Os08g0195800 Cyclin-like F-box domain containing protein
Length = 346
Score = 268 bits (685), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 168/318 (52%), Positives = 205/318 (64%), Gaps = 39/318 (12%)
Query: 138 DWAAGLPREAILAVLRKLDHMEILMGAGQVCRAWRRAARDDPQLWRRIDMLNHAELSFEL 197
DWA GLP +AILA+ KL H +ILM A QVC WRRAARD+P LWRRI + LS +
Sbjct: 25 DWADGLPLDAILAIFHKLGHADILMAADQVCATWRRAARDEPALWRRITVRGTEALSARI 84
Query: 198 NLFGMAQAAVRRSAGQCEAFWGEYAPTKICSISSEIATIIYSQMTGLWGDAAMIIRFLTI 257
N G+A AAVRRSAGQCEAF GEYA GD ++ +LT
Sbjct: 85 NRGGLACAAVRRSAGQCEAFCGEYA-----------------------GDDGFLV-YLT- 119
Query: 258 VYEKRAPCLKSLRLISCFDILDEGFSAAVKKFPLLEELELTLCDNLGENDVFKAVGKACP 317
++A CLKSLRLISC + +EG A K+FPLLEELEL+ C N+ ++ + A+G ACP
Sbjct: 120 ---EQASCLKSLRLISCLGVSNEGIEEATKEFPLLEELELSFCYNV-THEAYAAIGAACP 175
Query: 318 QLKRFRLSKRCFYNYKHSGYNKDEQALGIATMHELSSLQLFANNLSNEGLTAILDNCPFL 377
QLKRFRLSKR FY+ + ++ A GI+ MH L SLQLFANNL+NEGL+ ILDNCP L
Sbjct: 176 QLKRFRLSKRSFYDSGGIRWKNNDDAGGISKMHGLRSLQLFANNLTNEGLSTILDNCPNL 235
Query: 378 ESLDIRHCFNVSMD-DTLQAKCARIKTLRLPYDSTDDYDFQVHK----PIWSGAXXXXXX 432
ESLDIRHCFN+ M D+L+AKC+RIK LR P DSTDDYDF V+ PI G
Sbjct: 236 ESLDIRHCFNIDMGADSLRAKCSRIKMLRPPDDSTDDYDFDVYTPRRLPISPG-----FV 290
Query: 433 XXXCIYGGPDYILDSDEY 450
+Y P+Y + SDE+
Sbjct: 291 RYYSVYSDPEYSMYSDEW 308
>Os08g0196200 Leucine-rich repeat 2 containing protein
Length = 265
Score = 239 bits (609), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 133/235 (56%), Positives = 166/235 (70%), Gaps = 30/235 (12%)
Query: 190 HAELSFELNLFGMAQAAVRRSAGQCEAFWGEYAPTKICSISSEIATIIYSQMTGLWGDAA 249
+A+ +NL GMAQAAV+RSAG+CEAFWGE A +
Sbjct: 6 NADAKRGVNLHGMAQAAVKRSAGRCEAFWGESAGSD------------------------ 41
Query: 250 MIIRFLTIVYEKRAPCLKSLRLISCFDILDEGFSAAVKKFPLLEELELTLCDNLGENDVF 309
RFL + + AP LKSLRLISC+D+ ++GF A+KKFPLLEELEL+L N+ DVF
Sbjct: 42 ---RFL-LFLGRAAPGLKSLRLISCYDVSNKGFGKAIKKFPLLEELELSLSPNVFGTDVF 97
Query: 310 KAVGKACPQLKRFRLSKRCFYNYKHSGYNKDEQALGIATMHELSSLQLFANNLSNEGLTA 369
+ VGK+CPQLKRFRLS+ F++++ S + D++ALGIATM +L SLQ+F N ++NEGL A
Sbjct: 98 RTVGKSCPQLKRFRLSQHGFHSFEDS--HDDDEALGIATMTQLRSLQIFGNTITNEGLEA 155
Query: 370 ILDNCPFLESLDIRHCFNVSMDDTLQAKCARIKTLRLPYDSTDDYDFQVHKPIWS 424
ILDNCP LESLDIRHCFNV MDDTL+AKCARIK LRLP DS DDYD QV P+++
Sbjct: 156 ILDNCPHLESLDIRHCFNVFMDDTLRAKCARIKALRLPDDSIDDYDLQVFSPVFA 210
>Os02g0317300 Cyclin-like F-box domain containing protein
Length = 328
Score = 218 bits (554), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 120/286 (41%), Positives = 171/286 (59%), Gaps = 35/286 (12%)
Query: 138 DWAAGLPREAILAVLRKLDHMEILMGAGQVCRAWRRAARDDPQLWRRIDMLNHAELSFEL 197
DWA +P +A+ AV KLD ++L+GAG VCRAWRR A DP LWRR+DM + ++
Sbjct: 21 DWAE-MPSDALAAVFGKLDVTDLLVGAGVVCRAWRRLAAIDPTLWRRVDMSHQGDIMEVD 79
Query: 198 NLFGMAQAAVRRSAGQCEAFWGEYAPTKICSISSEIATIIYSQMTGLWGDAAMIIRFLTI 257
MA+AAV R+AG EAFW + + + L +
Sbjct: 80 EAVAMARAAVDRAAGTMEAFWAD----------------------------SFVTDGLLL 111
Query: 258 VYEKRAPCLKSLRLISCFDILDEGFSAAVKKFPLLEELELTLCDNLGENDVFKAVGKACP 317
+RA LKSL+L C ++ +EG + A+K FP LEEL++T C G DV +VGKACP
Sbjct: 112 YISERASSLKSLQLSMCLNVSNEGMAEAMKGFPRLEELDITFCSLYG--DVCASVGKACP 169
Query: 318 QLKRFRLSKRCFYNYKHSG---YNKDEQALGIAT-MHELSSLQLFANNLSNEGLTAILDN 373
+LK FRL++R ++ + D +ALGIA+ M +L LQL N L+N+GL +ILD+
Sbjct: 170 ELKCFRLNERYTLQMDYAAPDIMDDDTEALGIASNMPKLRELQLIGNKLTNDGLMSILDH 229
Query: 374 CPFLESLDIRHCFNVSMDDTLQAKCARIKTLRLPYDSTDDYDFQVH 419
C LESLDIR C+++ MDD L++KC+RI L+LP+DS D+ ++ +
Sbjct: 230 CQHLESLDIRQCYSIQMDDALKSKCSRISDLKLPHDSISDFKYRAY 275
>Os02g0317500 Cyclin-like F-box domain containing protein
Length = 330
Score = 202 bits (513), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 123/285 (43%), Positives = 164/285 (57%), Gaps = 44/285 (15%)
Query: 138 DWAAGLPREAILAVLRKLDHMEILMGAGQVCRAWRRAARDDPQLWRRIDMLNHAELSFEL 197
+WA LP +A+LAV +L E+LMGAG VCR+W RAA +P+LWRR+D+ A +
Sbjct: 10 EWA-DLPVDAVLAVFERLGAAEVLMGAGVVCRSWLRAATREPRLWRRVDLT--ACFDPTV 66
Query: 198 NLFGMAQAAVRRSAGQCEAFWGEYAPTKICSISSEIATIIYSQMTGLWGDAAMIIRFLT- 256
++ MA+AAV R+ G+ E F E RF+T
Sbjct: 67 DMEAMARAAVDRAGGRLEHFAAE--------------------------------RFVTD 94
Query: 257 ---IVYEKRAPCLKSLRLISCFDILDEGFSAAVKKFPLLEELELTLCDNLGENDVFKAVG 313
+ KR CLKSLRL C I ++G A K P LEELELT C + + KAVG
Sbjct: 95 ELLLYVAKRTSCLKSLRLRDCIKISEKGLVAVGKTSPCLEELELTTCTI---SILLKAVG 151
Query: 314 KACPQLKRFRLSKRCFYNYKHSGYNKDEQALGIA-TMHELSSLQLFANNLSNEGLTAILD 372
+A P LK RL+ R +++ + + + ALGIA +MH L LQ+FAN L N L AILD
Sbjct: 152 EAFPNLKCLRLNHR-WFDVQFDEFRDNFHALGIACSMHRLRHLQIFANRLRNNALAAILD 210
Query: 373 NCPFLESLDIRHCFNVSMDDTLQAKCARIKTLRLPYDSTDDYDFQ 417
NCP LESLD+R CFNV +D ++AKCAR+K +R P DST DY+++
Sbjct: 211 NCPHLESLDLRQCFNVDVDAEVRAKCARLKDVRFPNDSTKDYEYE 255
>Os08g0193300
Length = 333
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 99/295 (33%), Positives = 142/295 (48%), Gaps = 57/295 (19%)
Query: 138 DWAAGLPREAILAVLRKLDHMEILMGAGQVCRAWRRAARDDPQLWRRIDMLNHAELSFEL 197
DW+ LP +A+ A+ KL +EILMGA VC +W AA P+LWR +DM H + +
Sbjct: 16 DWSE-LPVDALSAIFTKLGTVEILMGASFVCHSWL-AASKSPELWRFVDMTRHKVIFSKR 73
Query: 198 N--LFGMAQAAVRRSAGQCEAFWGEYAPTKICSISSEIATIIYSQMTGLWGDAAMIIRFL 255
L MA+AA+ RS GQ E+FW + ++ E+ I
Sbjct: 74 TGILCAMAKAAIDRSDGQIESFWAQKF------VTGELLDYIV----------------- 110
Query: 256 TIVYEKRAPCLKSLRLISCFDILDEGFSAAVKKFPLLEELELTLCDNLGENDVFKAVGKA 315
+RA LKS+RL++C I + + K PLLEE+E + + D FK VG+
Sbjct: 111 -----RRASTLKSIRLVACTFIQWQSLAMLAAKCPLLEEIECSY--HKMPADFFKCVGRV 163
Query: 316 CPQLKRFRLSKRCFYN----------------------YKHSGYNKDEQALGIA-TMHEL 352
P LKR R+ F ++ ++ A IA MHEL
Sbjct: 164 RPNLKRLRVHMHYFDQDELENELIKHVLEEGGEVFEEPFEQREARRNADAFAIAENMHEL 223
Query: 353 SSLQLFANNLSNEGLTAILDNCPFLESLDIRHCFNVSMDDTLQAKCARIKTLRLP 407
LQ+ +NL+ G+ AILD CP LE LD+ C ++ +D LQA+ A I+ +RLP
Sbjct: 224 RLLQIAGHNLTEIGVRAILDGCPHLECLDLSSCHDIYVDGQLQARFAMIRHVRLP 278
>Os08g0195200
Length = 261
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/256 (33%), Positives = 122/256 (47%), Gaps = 40/256 (15%)
Query: 155 LDHMEILMGAGQVCRAWRRAARDDPQLWRRIDMLNHAELSFELNLFGMAQAAVRRSAGQC 214
LD + ++ G + R A P LWR +DM + MA+ AV RS G+
Sbjct: 37 LDALSVVFG-----KLPRHRAAKLPHLWRCVDMSHSHPRDVSRRNCAMAKVAVDRSGGKL 91
Query: 215 EAFWGEYAPTKICSISSEIATIIYSQMTGLWGDAAMIIRFLTIVYEKRAPCLKSLRLISC 274
E F G+ T LT V + R+PCLK L L SC
Sbjct: 92 EVFKGKRFVTN---------------------------NLLTYVAD-RSPCLKCLYLESC 123
Query: 275 FDILDEGFSAAVKKFPLLEELELTLCDNLGENDVFKAVGKACPQLKRFRLSKRCFYNYKH 334
+ ++G + + K P+LE+L L C N+ + DVF GKAC ++KR + +
Sbjct: 124 TSVSNKGLTELITKCPMLEDLTLYSCRNI-DGDVFVVAGKACRRMKRLHVR----WCGAL 178
Query: 335 SGYNKDEQALGIATMHELSSLQLFANNLSNEGLTAILDNCPFLESLDIRHCFNV-SMDDT 393
Y ++ +GIATM EL L L +S E L AI+D CP L+ L + C + ++DD
Sbjct: 179 PAYFDGDEPVGIATMRELRHLTLEGIGVSQEKLMAIVDGCPQLDLLHVSGCPGLAAVDDA 238
Query: 394 LQAKCARIKTLRL-PY 408
LQAKCA IK+L L PY
Sbjct: 239 LQAKCAGIKSLTLRPY 254
>Os11g0637300 Cyclin-like F-box domain containing protein
Length = 252
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/280 (33%), Positives = 129/280 (46%), Gaps = 73/280 (26%)
Query: 138 DWAAGLPREAILAVLRKLDHMEILMGAGQVCRAWRRAARDDPQLWRRIDMLNHAELSFEL 197
DW+ LP + + V K+ +E+L GAG CR+W AAR P+LWR +DML A L
Sbjct: 21 DWSE-LPADVLSVVFAKVGAVEVLAGAGLACRSWLDAAR-VPELWRAVDMLRGAVRCLHL 78
Query: 198 N-----LFGMAQAAVRRSAGQCEAFWGEYAPTKICSISSEIATIIYSQMTGLWGDAAMII 252
+ MA+ AV RS G+ E F GE +S E+ I GD
Sbjct: 79 GQDRDLMCAMAKVAVDRSGGRLEVFKGED------FVSDELLEYI--------GD----- 119
Query: 253 RFLTIVYEKRAPCLKSLRLISCFD---ILDEGFSAAVKKFPLLEELELTLCDNLGENDVF 309
R+P LK + + C D + EGF+ +K PLLEE+ V
Sbjct: 120 ---------RSPSLKVIS-VWCSDETRMSTEGFAELTRKCPLLEEI------------VL 157
Query: 310 KAVGKACPQLKRFRLSKRCFYNYKHSGYNKDEQALGIATMHELSSLQLFANNLSNEGLTA 369
+ G P L R AL +A + L L + +SN+ LTA
Sbjct: 158 SSGGHRRPPLPRL--------------------ALAVAELRHLRRLTVQGIGVSNDELTA 197
Query: 370 ILDNCPFLESLDIRHCFNVSMDDTLQ--AKCARIKTLRLP 407
I+D CP LE LD+ C+++ +DD Q AKCARI+TL+LP
Sbjct: 198 IVDGCPRLELLDVCSCWDLCVDDDAQLLAKCARIRTLKLP 237
>Os08g0195900
Length = 302
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/163 (41%), Positives = 87/163 (53%), Gaps = 34/163 (20%)
Query: 138 DWAAGLPREAILAVLRKLDHMEILMGAGQVCRAWRRAARDDPQLWRRIDMLNHAELSF-- 195
DWA LP +AIL V R LDH++ILMGAG C++WR AARD+P LWRRIDM A L +
Sbjct: 38 DWAE-LPVDAILQVFRWLDHVDILMGAGLACQSWRAAARDEPALWRRIDMRGFACLPYWQ 96
Query: 196 ---ELNLFGMAQAAVRRSAGQCEAFWGEYAPTKICSISSEIATIIYSQMTGLWGDAAMII 252
+ MA+ AVRRS G+CE FW + G ++
Sbjct: 97 RHRRDTVRAMAREAVRRSDGRCEEFWSKV------------------------GGDDEVL 132
Query: 253 RFLTIVYEKRAPCLKSLRLISCFDILDEGFSAAVKKFPLLEEL 295
+FL AP L+S+RL+ C + EG SA ++ PLLE L
Sbjct: 133 QFLA----DHAPYLRSIRLVKCDHVSKEGISAIIQSCPLLEAL 171
>Os08g0194000
Length = 389
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 91/302 (30%), Positives = 138/302 (45%), Gaps = 78/302 (25%)
Query: 138 DWAAGLPREAILAVLRKLDHMEILMGAGQVCRAWRRAARDDPQLWRRIDMLNHAELSFEL 197
DW+ LP +A+ K+ +EILMGAG VC +W AA+ P LWR +DM H ++ F+
Sbjct: 43 DWSE-LPVDALSVFFAKIGAIEILMGAGLVCHSWLEAAK-VPDLWRSLDMTRH-KVIFKK 99
Query: 198 NLF---GMAQAAVRRSAGQCEAFWGEYAPTKICSISSEIATIIYSQMTGLWGDAAMIIRF 254
+ MA+ AV RSAG+ E+FW + ++S++ I
Sbjct: 100 TIGVMCAMARVAVDRSAGKLESFWAQNF------VTSDLLKYI----------------- 136
Query: 255 LTIVYEKRAPCLKSLRLISCFDILDEGFSAAVKKFPLLEELELTLCDNLGENDVFKAVGK 314
+R LKS+RLI+ + + K PLLE+LE + D+L E F+ +G
Sbjct: 137 -----GERTTSLKSIRLIAYTRVPWKELVNLAAKSPLLEDLEHSYRDSLEE--FFEHLGC 189
Query: 315 ACPQLKRFRLSKRCFYNYKHSGYNKDEQALGIA--------------------------- 347
CPQL+ R++ F Y + Y+ +Q +G
Sbjct: 190 KCPQLRCLRVNNDGFV-YDDAKYDLMDQVIGDHDDDDDEEDELEYGPWDWPSNNNGVAFA 248
Query: 348 ---TMHELSSLQLFANNLSNEGLTAILDNCPFLESLDIRHCFNVSMDDTLQAKCARIKTL 404
+MHEL LQ+ N L+N G+ AILD+C NVS +D L+A+ A ++
Sbjct: 249 IAESMHELRILQITNNTLTNAGVLAILDSCN-----------NVSPNDQLRARWASLRHF 297
Query: 405 RL 406
L
Sbjct: 298 NL 299
>Os08g0191300
Length = 319
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/275 (31%), Positives = 129/275 (46%), Gaps = 42/275 (15%)
Query: 138 DWAAGLPREAILAVLRKLDHMEILMGAGQVCRAWRRAARDDPQLWRRIDMLNHAELSFEL 197
DW+ LP +A+ V KL +E+LMGAG VCR W A + P LWR +D+ + L
Sbjct: 16 DWSE-LPVDALSVVFAKLGAVEVLMGAGLVCRPWLDATK-LPHLWRCVDIAAMKKKRAVL 73
Query: 198 NLFGMAQAAVRRSAGQCEAFWGEYAPTKICSISSEIATIIYSQMTGLWGDAAMIIRFLTI 257
+ MA AV+R+ GQ EAF + +++ GD+
Sbjct: 74 CV--MADEAVKRADGQLEAFMA--------------GAFVTNKLLKHVGDS--------- 108
Query: 258 VYEKRAPCLKSLRLISCFDILDEGFSAAVKKFPLLEELELTLCDNL-----GENDVFKAV 312
+P LK L L SC + G + + PLLEEL L+ C + G V+ AV
Sbjct: 109 -----SPTLKRLWLESCSLVTSNGLAQMIAMAPLLEELVLSYCRKVRGGGGGGGGVYAAV 163
Query: 313 GKACPQLKRFRLSK-RCFYNYKHSGYNKDEQALGIATMHELSSLQLFA-NNLSNEGLTAI 370
+ACP+L+R + + + + G + + LGIA M EL L L ++ L AI
Sbjct: 164 AEACPRLRRLEVRRYPAWRDDDGGGDHHRRRPLGIAAMRELRHLTLVGVAGAGDDELAAI 223
Query: 371 LD-NCPFLESLDIRHCFNVSMDDT--LQAKCARIK 402
+D CP LE L + C ++ D L++KC +K
Sbjct: 224 VDGGCPHLEVLHVSECPGLAAVDVAALRSKCGGVK 258
>Os08g0193200 Cyclin-like F-box domain containing protein
Length = 340
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 120/259 (46%), Gaps = 57/259 (22%)
Query: 138 DWAAGLPREAILAVLRKLDHMEILMGAGQVCRAWRRAARDDPQLWRRIDMLNHAELSFEL 197
DW+ LP +A+ AV KL +EILMGA VC +W AA P+LWR +DM H + +
Sbjct: 15 DWSK-LPVDALSAVFMKLGTVEILMGASFVCHSW-LAASKSPELWRFVDMTRHKVIFSKG 72
Query: 198 N--LFGMAQAAVRRSAGQCEAFWGEYAPTKICSISSEIATIIYSQMTGLWGDAAMIIRFL 255
L MA+AA+ RS G+ E+FW + T C + L
Sbjct: 73 TDILCAMAKAAIDRSDGRMESFWAQKFVT--CEL-------------------------L 105
Query: 256 TIVYEKRAPCLKSLRLISCFDILDEGFSAAVKKFPLLEELELTLCDNLGENDVFKAVGKA 315
+ + + LKS+RLI+C + + + + PLLEE+E + + D FK VG
Sbjct: 106 DYIVSRASSTLKSIRLIACTFVWGQSLATLAARCPLLEEIECS--HHKMSADFFKYVGIV 163
Query: 316 CPQLKRFRLSKRCF------------YN-----------YKHSGYNKDEQALGIA-TMHE 351
PQLKR R+ F +N ++ ++ A IA MHE
Sbjct: 164 RPQLKRLRVHMPYFDYDAMEDEMKEHHNEDEDDDEYEEPFEQWEARRNVDAFAIAENMHE 223
Query: 352 LSSLQLFANNLSNEGLTAI 370
L LQ+ NNL+N+G++ +
Sbjct: 224 LRLLQISGNNLTNKGVSEL 242
>Os08g0195000
Length = 250
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/272 (31%), Positives = 130/272 (47%), Gaps = 47/272 (17%)
Query: 138 DWAAGLPREAILAVLRKLDHMEILMGAGQVCRAWRRAARDDPQLWRRIDMLNHAELSFE- 196
DW+ LP +A + KL +E+LMGAG VC +W AA+ P LW+ ++M++H LS +
Sbjct: 12 DWSE-LPMDAFSVIFAKLGAIELLMGAGLVCHSWLHAAK-LPHLWQCVEMVHHEALSLKE 69
Query: 197 -LNLFGMAQAAVRRSAGQCEAFWGEYAPTKICSISSEIATIIYSQMTGLWGDAAMIIRFL 255
+ + MA+AAV RS G+ EAF G+ W ++ ++
Sbjct: 70 PIVMSEMARAAVDRSDGRLEAFEGQ------------------------WFVNDGLLNYI 105
Query: 256 TIVYEKRAPCLKSLRLISCFDILDEGFSAAVKKFPLLEELELTLCDNLGENDVFKAVGKA 315
R+P LK L L+SC+ + E F + K PL+E++ L C ++ + + GK+
Sbjct: 106 ----RDRSPKLKRLCLVSCYSVYKEAFIEFIAKCPLIEDIALINCGSVVFHALNVITGKS 161
Query: 316 CPQLKRFRLSKRCFYNYKHSGYNKDEQALGIATMHELSSLQLFA----NNLSNEGLTAIL 371
PQLKRF L ++ Y D LGI T+ L L L +N LT IL
Sbjct: 162 FPQLKRFELRT----AFERPCYGCD-VPLGIPTVRHLQHLILGGIIDIDNEEPPALTLIL 216
Query: 372 DNCPFLESLDIRHCFNVSMDDTLQAKCARIKT 403
L S + + TL+AKCA+IK
Sbjct: 217 -----LASGSAMSSRSSML-RTLRAKCAKIKI 242
>Os08g0194100
Length = 284
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/241 (31%), Positives = 111/241 (46%), Gaps = 58/241 (24%)
Query: 202 MAQAAVRRSAGQCEAFWGEYAPTKICSISSEIATIIYSQMTGLWGDAAMIIRFLTIVYEK 261
MA+ AV RS G+ E F G + ++ GD
Sbjct: 52 MAKVAVDRSDGRLEVFEG--------------YGFVNDELLQYIGD-------------- 83
Query: 262 RAPCLKSLRLISCFDILD---EGFSAAVKKFPLLEELEL------------TLCDNLGE- 305
R+P LK L LIS F LD + F+ + K P LE+L + TL + E
Sbjct: 84 RSPSLKGLSLISLFSYLDISKKVFTEFISKCPCLEDLVVEEGGFIGGETGFTLSVEVTEM 143
Query: 306 -----------NDVFKAVGKACPQLKRFRLSKRCFYNYKHSGYNKDEQALGIATMHELSS 354
++ A+ K+C QLKR +L+ + + + G+ DE GIATM +L
Sbjct: 144 TEISVRNFQPCGEIVLAIAKSCTQLKRLKLTVHTYPDSR--GFFVDE-PFGIATMKQLRH 200
Query: 355 LQLFANNLSNEGLTAILDNCPFLESLDIRHCFNVSMDDTLQAKCARIKTLRLPYDSTDDY 414
L L + + NE L AI+D CP LE LD+ C+ + +DD L+ KCA IKT++LP + D
Sbjct: 201 LILGSICIGNEELMAIIDACPHLELLDVSKCYKLDVDDALRTKCAGIKTVKLPLSLSHDG 260
Query: 415 D 415
D
Sbjct: 261 D 261
>Os08g0193500 Cyclin-like F-box domain containing protein
Length = 447
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 97/195 (49%), Gaps = 36/195 (18%)
Query: 138 DWAAGLPREAILAVLRKLDHMEILMGAGQVCRAWRRAARDDPQLWRRIDMLNHAELSFEL 197
DW+ LP +A+ + KL +E+LMGAG VC +W AA+ P+LWR +DM H ++ F
Sbjct: 15 DWS-DLPTDALSTIFMKLGSIEVLMGAGLVCHSWLAAAK-SPELWRSVDMTRH-KVVFSK 71
Query: 198 ---NLFGMAQAAVRRSAGQCEAFWGEYAPTKICSISSEIATIIYSQMTGLWGDAAMIIRF 254
+ MA+ A+ RS G+ E+F + ++SE+ I
Sbjct: 72 GIDTMCAMAKVAIDRSQGKMESFLAQKF------VTSELLDYIAC--------------- 110
Query: 255 LTIVYEKRAPCLKSLRLISCFDILDEGFSAAVKKFPLLEELELTLCDNLGENDVFKAVGK 314
RA LKS+RLI+C + + + + PLLEE+E + N ++ VG+
Sbjct: 111 -------RASSLKSIRLIACRNFWEPSLAELATQCPLLEEIECS--GNKMSSEFLVYVGR 161
Query: 315 ACPQLKRFRLSKRCF 329
A PQLKR ++ R F
Sbjct: 162 ARPQLKRLKIHMRWF 176
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 53/84 (63%), Gaps = 6/84 (7%)
Query: 339 KDEQALGIA-TMHELSSLQLFANNLSNEGLTAILDNCPFLESLDIRHCFNVSMDDTLQAK 397
K++ A IA M EL LQ+ NNL+N+G+ AILD CP LE D+ C+NV +DD L+A+
Sbjct: 291 KNKDAFAIAENMPELRLLQISGNNLTNKGVHAILDGCPHLECFDLSECYNVRVDDQLRAR 350
Query: 398 CARIKTLRLPYDSTDDYDFQVHKP 421
CA+IK LP S +VH P
Sbjct: 351 CAKIKHAWLPRQSP-----RVHCP 369
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.322 0.137 0.426
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 13,826,646
Number of extensions: 509850
Number of successful extensions: 1624
Number of sequences better than 1.0e-10: 16
Number of HSP's gapped: 1573
Number of HSP's successfully gapped: 20
Length of query: 484
Length of database: 17,035,801
Length adjustment: 105
Effective length of query: 379
Effective length of database: 11,553,331
Effective search space: 4378712449
Effective search space used: 4378712449
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 158 (65.5 bits)