BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0670200 Os07g0670200|J075083N20
(232 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os07g0670200 C2 calcium/lipid-binding region, CaLB domain c... 358 3e-99
Os07g0670300 C2 calcium/lipid-binding region, CaLB domain c... 133 1e-31
Os01g0934100 C2 calcium/lipid-binding region, CaLB domain c... 117 5e-27
Os05g0370300 C2 calcium/lipid-binding region, CaLB domain c... 112 3e-25
Os05g0149100 C2 calcium/lipid-binding region, CaLB domain c... 99 4e-21
Os01g0369500 C2 calcium/lipid-binding region, CaLB domain c... 97 1e-20
>Os07g0670200 C2 calcium/lipid-binding region, CaLB domain containing protein
Length = 232
Score = 358 bits (918), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 184/232 (79%), Positives = 184/232 (79%)
Query: 1 MAYRALEVTLISARNLKKVNLITPMEVYAVVSVSGNPLARQCTLPDRHGGRNPTWNATLH 60
MAYRALEVTLISARNLKKVNLITPMEVYAVVSVSGNPLARQCTLPDRHGGRNPTWNATLH
Sbjct: 1 MAYRALEVTLISARNLKKVNLITPMEVYAVVSVSGNPLARQCTLPDRHGGRNPTWNATLH 60
Query: 61 LAVPAAAPGAFLHVLLRTERALGDRDVGEVFVPXXXXXXXXXXXXXXXXXKVQSTTEHCG 120
LAVPAAAPGAFLHVLLRTERALGDRDVGEVFVP KVQSTTEHCG
Sbjct: 61 LAVPAAAPGAFLHVLLRTERALGDRDVGEVFVPVADLQLAAAAHYQYLVHKVQSTTEHCG 120
Query: 121 VLSLSYRLGXXXXXXXXXXXDTGAVPAYLVVPCYANAPPYVYLSPANXXXXXXXXXXXXX 180
VLSLSYRLG DTGAVPAYLVVPCYANAPPYVYLSPAN
Sbjct: 121 VLSLSYRLGPVVVPAPPLAADTGAVPAYLVVPCYANAPPYVYLSPANPARGEAASASPSP 180
Query: 181 XXXXXXXGDFGQWLGGAVRGMLSGEAMSPDTAAYDAGYKTLIGVADGRRVKF 232
GDFGQWLGGAVRGMLSGEAMSPDTAAYDAGYKTLIGVADGRRVKF
Sbjct: 181 PPRRKRSGDFGQWLGGAVRGMLSGEAMSPDTAAYDAGYKTLIGVADGRRVKF 232
>Os07g0670300 C2 calcium/lipid-binding region, CaLB domain containing protein
Length = 310
Score = 133 bits (334), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 73/137 (53%), Positives = 86/137 (62%), Gaps = 8/137 (5%)
Query: 1 MAYRALEVTLISARNLKKVNLITPMEVYAVVSVSGNPLARQCTLPDRHGGRNPTWNATLH 60
MAYR LEVTL SAR+LK VN I+ MEVYAV ++SG+PL RQCT PD +GGR+P WNATL
Sbjct: 1 MAYRVLEVTLHSARDLKNVNFISRMEVYAVATISGDPLTRQCTPPDPYGGRHPAWNATLR 60
Query: 61 LAVP--AAAPGAFLHVLLRTERALGDRDVGEVFVPXXXXXX------XXXXXXXXXXXKV 112
VP AA+ LHVLLR ER+LGDRD+GEV +P +
Sbjct: 61 FTVPPTAASAAGCLHVLLRAERSLGDRDIGEVIIPLADVLSGPYDLGARPPQFASYQVRK 120
Query: 113 QSTTEHCGVLSLSYRLG 129
+E GVL LSYRLG
Sbjct: 121 LHRSETRGVLHLSYRLG 137
>Os01g0934100 C2 calcium/lipid-binding region, CaLB domain containing protein
Length = 358
Score = 117 bits (294), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 68/135 (50%), Positives = 85/135 (62%), Gaps = 7/135 (5%)
Query: 1 MAYRALEVTLISARNLKKVNLITPMEVYAVVSVSGNPLARQCTLPDRHGGRNPTWNAT-L 59
MA R LE+TLISA++LK VNL++ MEVYAVVS+SG+ +RQ DR GGRNP WNA L
Sbjct: 1 MAQRTLELTLISAKDLKDVNLLSKMEVYAVVSLSGDRRSRQRIATDRAGGRNPAWNAAPL 60
Query: 60 HLAVPAAAPGAFLHVLLRTERALGDRDVGEVFVP-----XXXXXXXXXXXXXXXXXKVQS 114
VPA+ G+ LHVLLR ERALGDRDVGEV +P + S
Sbjct: 61 RFTVPASGAGS-LHVLLRAERALGDRDVGEVHIPLSELLSGAPDGAVPAKFVSYQVRKIS 119
Query: 115 TTEHCGVLSLSYRLG 129
+ + GVL+ SY++G
Sbjct: 120 SGKPQGVLNFSYKIG 134
>Os05g0370300 C2 calcium/lipid-binding region, CaLB domain containing protein
Length = 303
Score = 112 bits (279), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/141 (49%), Positives = 88/141 (62%), Gaps = 12/141 (8%)
Query: 1 MAYRALEVTLISARNLKKVNLITPMEVYAVVSVSGNPLARQCTLPDRHGGRNPTW---NA 57
MA R LE+TL+SA +L+ VNL++ MEVYAVV ++G+P ARQ DR GGRNP+W +A
Sbjct: 86 MACRTLELTLLSASDLRGVNLVSKMEVYAVVYLAGDPRARQRVATDRAGGRNPSWKGKDA 145
Query: 58 TLHLAVPAAAPGA-FLHVLLRTERA--LGDRDVGEVFVP------XXXXXXXXXXXXXXX 108
T+ LAVPA+ G+ + VLLR ERA GDRDVGEVFVP
Sbjct: 146 TVRLAVPASGAGSGAVRVLLRAERAGLGGDRDVGEVFVPLPDVLAGSGDGPTAAAVASYP 205
Query: 109 XXKVQSTTEHCGVLSLSYRLG 129
KV S+ GVL+LSY+LG
Sbjct: 206 VRKVGSSRTTHGVLNLSYKLG 226
>Os05g0149100 C2 calcium/lipid-binding region, CaLB domain containing protein
Length = 279
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 61/139 (43%), Positives = 74/139 (53%), Gaps = 13/139 (9%)
Query: 1 MAYRALEVTLISARNLKKVNLITPMEVYAVVSVSGN----PLARQCTLPDRHGGRNPTWN 56
MA R LEVTL+SA+NLKKV + + M VYAV S+SG P R T DR GGR+P W+
Sbjct: 1 MARRVLEVTLVSAKNLKKVTMFSKMRVYAVASISGGDPRVPTHR--THADREGGRSPMWH 58
Query: 57 ATLHLAVPAAAP---GAFLHVLLRTERALGDRDVGEVFVPXXXXXXXX----XXXXXXXX 109
A L +P A LHVLLR ER GD DVGEVFVP
Sbjct: 59 APLRFPIPDAGADMRAIALHVLLRAERVFGDSDVGEVFVPVKDLVAAAPEGGEHRHLSYH 118
Query: 110 XKVQSTTEHCGVLSLSYRL 128
+ + CGVL +SY++
Sbjct: 119 VRRPVSGRKCGVLHISYQI 137
>Os01g0369500 C2 calcium/lipid-binding region, CaLB domain containing protein
Length = 297
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/98 (55%), Positives = 64/98 (65%), Gaps = 5/98 (5%)
Query: 1 MAYRALEVTLISARNLKKVNLITPMEVYAVVSVSGN--PLARQCTLPDRHGGRNPTWNAT 58
MAYR LE+TL+SA +LKKV L + M VYAV S+SG+ P+ T DR+GG NP WN
Sbjct: 1 MAYRLLELTLVSASDLKKVTLFSRMHVYAVASISGSNVPMPMHGTHADRNGGSNPAWNTV 60
Query: 59 LHLAVPA--AAPGAFLHVLLRTERAL-GDRDVGEVFVP 93
LH VPA G LHV LR R+ G RDVG+VFVP
Sbjct: 61 LHFPVPARFDTRGLALHVQLRARRSFGGHRDVGDVFVP 98
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.320 0.136 0.417
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 6,797,180
Number of extensions: 241396
Number of successful extensions: 542
Number of sequences better than 1.0e-10: 6
Number of HSP's gapped: 531
Number of HSP's successfully gapped: 6
Length of query: 232
Length of database: 17,035,801
Length adjustment: 98
Effective length of query: 134
Effective length of database: 11,918,829
Effective search space: 1597123086
Effective search space used: 1597123086
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 154 (63.9 bits)