Os07g0670200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : C2 calcium/lipid-binding region, CaLB domain containing protein.
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Os07g0670200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : C2 calcium/lipid-binding region, CaLB domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 365.82 | 0.899 | 4.92 | -0.341 | 2.51 | 3.3 | 0.47 | -0.843 | 1.06 | 20 | 20.34 | 691 | 22.8 | -- |
| 366.16 | 0.891 | 4.91 | -0.193 | 2.55 | 3.33 | 0.395 | -- | 1.1 | 20.1 | 20.2 | 667 | 22.7 | -- |
| 366.38 | 0.891 | 4.92 | -0.312 | 2.5 | 3.32 | -- | -0.642 | 1.07 | 20 | 20.41 | 682 | 22.7 | -- |
| 366.64 | 0.892 | 4.9 | -0.195 | 2.52 | 3.32 | -- | -- | 1.11 | 20.1 | 20.28 | 666 | 22.6 | -- |
| 407.18 | 0.94 | 4.84 | -0.349 | -- | 5.3 | -- | -1.67 | 1.16 | -- | 5.357 | 966 | 20.4 | -- |
| 542.21 | 1.09 | 4.79 | 0.584 | 3.5 | -- | 0.957 | -- | 1.68 | 18.5 | -- | -- | -- | -- |
| 544.5 | 1.09 | 4.79 | 0.571 | 3.5 | -- | -- | -- | 1.69 | 18.5 | -- | -- | -- | -- |
| 402.36 | 0.934 | 4.85 | -0.379 | -- | 5.3 | -- | -- | 1.15 | -- | 5.105 | 971 | 20.4 | -- |
| 367.5 | 0.893 | 4.9 | -- | 2.54 | 3.23 | -- | -- | 1.13 | 20 | 20.55 | 664 | 22.7 | -- |
| 1181.41 | 1.61 | 4.72 | 0.483 | -- | -- | -- | -- | 1.61 | -- | -- | -- | -- | -- |
| 553.08 | 1.1 | 4.8 | -- | 3.49 | -- | -- | -- | 1.62 | 18.5 | -- | -- | -- | -- |
| 405.02 | 0.937 | 4.8 | -- | -- | 5.15 | -- | -- | 1.26 | -- | 5.295 | 935 | 20.1 | -- |
| 1187.55 | 1.61 | 4.73 | -- | -- | -- | -- | -- | 1.56 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 360.82 | temperature | 20 | 720 | > th | dose dependent | rect. | 4 | 6 |
| 8 | 366.44 | temperature | 20 | 720 | > th | dose dependent | sin | 5 | NA |
| 12 | 369.33 | temperature | 10 | 720 | > th | dose dependent | rect. | 22 | 18 |
| 14 | 370.33 | temperature | 20 | 720 | > th | dose dependent | rect. | 22 | 17 |
| 22 | 371.99 | temperature | 10 | 720 | > th | dose dependent | sin | 4 | NA |
| 29 | 372.84 | temperature | 30 | 720 | < th | dose dependent | sin | 4 | NA |
| 35 | 373.43 | temperature | 25 | 720 | > th | dose independent | rect. | 5 | 4 |
| 38 | 373.72 | temperature | 30 | 720 | < th | dose dependent | rect. | 1 | 14 |
| 49 | 374.66 | temperature | 30 | 720 | < th | dose dependent | rect. | 3 | 10 |
| 90 | 378.14 | temperature | 30 | 720 | < th | dose dependent | rect. | 5 | 8 |
| 104 | 378.97 | temperature | 20 | 720 | > th | dose dependent | rect. | 4 | 10 |
| 107 | 379.17 | temperature | 25 | 720 | < th | dose independent | sin | 4 | NA |
| 109 | 379.19 | temperature | 10 | 720 | > th | dose dependent | rect. | 2 | 15 |
| 134 | 380.39 | temperature | 25 | 720 | < th | dose independent | rect. | 3 | 10 |
| 159 | 381.09 | temperature | 25 | 720 | > th | dose independent | sin | 4 | NA |
| 207 | 383.05 | temperature | 25 | 720 | < th | dose independent | rect. | 5 | 7 |
| 225 | 383.82 | temperature | 20 | 270 | > th | dose dependent | rect. | 3 | 21 |
| 298 | 385.46 | temperature | 15 | 1440 | > th | dose dependent | rect. | 19 | 14 |
| 308 | 385.70 | temperature | 30 | 1440 | < th | dose dependent | rect. | 19 | 14 |
| 345 | 386.16 | temperature | 10 | 270 | > th | dose dependent | rect. | 11 | 23 |
| 433 | 387.22 | temperature | 15 | 1440 | > th | dose dependent | sin | 9 | NA |
| 481 | 387.71 | temperature | 25 | 720 | > th | dose independent | rect. | 4 | 10 |
| 489 | 387.77 | temperature | 30 | 1440 | < th | dose dependent | sin | 9 | NA |
| 700 | 389.65 | temperature | 30 | 4320 | < th | dose dependent | rect. | 21 | 2 |
| 748 | 390.04 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 2 |
| 760 | 390.09 | temperature | 15 | 4320 | > th | dose dependent | rect. | 3 | 1 |
| 777 | 390.17 | temperature | 30 | 4320 | < th | dose dependent | rect. | 3 | 1 |