BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0666900 Os07g0666900|AK064004
(535 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os07g0666900 Similar to Na+/H+ antiporter NHX6 944 0.0
Os11g0648000 Similar to Na+/H+ antiporter 709 0.0
Os05g0148600 Similar to Na+/H+ antiporter 678 0.0
Os06g0318500 Sodium/hydrogen exchanger family protein 452 e-127
Os09g0286400 Sodium/hydrogen exchanger subfamily protein 155 6e-38
>Os07g0666900 Similar to Na+/H+ antiporter NHX6
Length = 535
Score = 944 bits (2441), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 470/535 (87%), Positives = 470/535 (87%)
Query: 1 MGMEVAAARLGALYTTSDYASVVSINLFVALLCACIVLGHLLEENRWVNESITALIIGLC 60
MGMEVAAARLGALYTTSDYASVVSINLFVALLCACIVLGHLLEENRWVNESITALIIGLC
Sbjct: 1 MGMEVAAARLGALYTTSDYASVVSINLFVALLCACIVLGHLLEENRWVNESITALIIGLC 60
Query: 61 TGVVILLMTKGKSSHLFVFSEDLFFIYLLPPIIFNAGFQVKKKQFFRNFMTITLFGAVGT 120
TGVVILLMTKGKSSHLFVFSEDLFFIYLLPPIIFNAGFQVKKKQFFRNFMTITLFGAVGT
Sbjct: 61 TGVVILLMTKGKSSHLFVFSEDLFFIYLLPPIIFNAGFQVKKKQFFRNFMTITLFGAVGT 120
Query: 121 MXXXXXXXXXXXXXXXRMNIGTLDVGDFLAIGAIFSATDSVCTLQVLNQDETPFLYSLVF 180
M RMNIGTLDVGDFLAIGAIFSATDSVCTLQVLNQDETPFLYSLVF
Sbjct: 121 MISFFTISIAAIAIFSRMNIGTLDVGDFLAIGAIFSATDSVCTLQVLNQDETPFLYSLVF 180
Query: 181 GEGVVNDATSIVLFNALQNFDLVHIDAAVVLKFLGNFFYLFLSSTFLGVFAGLLSAYIIK 240
GEGVVNDATSIVLFNALQNFDLVHIDAAVVLKFLGNFFYLFLSSTFLGVFAGLLSAYIIK
Sbjct: 181 GEGVVNDATSIVLFNALQNFDLVHIDAAVVLKFLGNFFYLFLSSTFLGVFAGLLSAYIIK 240
Query: 241 KLYIGRHSTDREVXXXXXXXXXXXXXXXXXDLSGILTVFFCGIVMSHYTWHNVTESSRVT 300
KLYIGRHSTDREV DLSGILTVFFCGIVMSHYTWHNVTESSRVT
Sbjct: 241 KLYIGRHSTDREVALMMLMAYLSYMLAELLDLSGILTVFFCGIVMSHYTWHNVTESSRVT 300
Query: 301 TKHAFATLSFIAETFLFLYVGMDALDIEKWEFASDRPXXXXXXXXXXXXXXXXXRAAFVF 360
TKHAFATLSFIAETFLFLYVGMDALDIEKWEFASDRP RAAFVF
Sbjct: 301 TKHAFATLSFIAETFLFLYVGMDALDIEKWEFASDRPGKSIGISSILLGLVLIGRAAFVF 360
Query: 361 PLSFLSNLTKKAPNEKITWRQQVVIWWAGLMRGAVSIALAYNKFTRSGHTQLHGNAIMIT 420
PLSFLSNLTKKAPNEKITWRQQVVIWWAGLMRGAVSIALAYNKFTRSGHTQLHGNAIMIT
Sbjct: 361 PLSFLSNLTKKAPNEKITWRQQVVIWWAGLMRGAVSIALAYNKFTRSGHTQLHGNAIMIT 420
Query: 421 STITVVLFSTMVFGMMTKPLIRLLLPASGHPVTXXXXXXXXXXXXXXXXMQGSDLESTTN 480
STITVVLFSTMVFGMMTKPLIRLLLPASGHPVT MQGSDLESTTN
Sbjct: 421 STITVVLFSTMVFGMMTKPLIRLLLPASGHPVTSEPSSPKSLHSPLLTSMQGSDLESTTN 480
Query: 481 IVRPSSLRMLLTKPTHTVHYYWRKFDDALMRPMFGGRGFVPFSPGSPTEQSHGGR 535
IVRPSSLRMLLTKPTHTVHYYWRKFDDALMRPMFGGRGFVPFSPGSPTEQSHGGR
Sbjct: 481 IVRPSSLRMLLTKPTHTVHYYWRKFDDALMRPMFGGRGFVPFSPGSPTEQSHGGR 535
>Os11g0648000 Similar to Na+/H+ antiporter
Length = 545
Score = 709 bits (1830), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/521 (68%), Positives = 402/521 (77%), Gaps = 6/521 (1%)
Query: 17 SDYASVVSINLFVALLCACIVLGHLLEENRWVNESITALIIGLCTGVVILLMTKGKSSHL 76
+DY S+ ++ +FVAL+C CIV+GHLLEE+RW+NESITALIIGL TG VIL+++ K S +
Sbjct: 16 ADYGSIAAVGMFVALICVCIVVGHLLEESRWMNESITALIIGLGTGGVILMVSSWKHSRI 75
Query: 77 FVFSEDLFFIYLLPPIIFNAGFQVKKKQFFRNFMTITLFGAVGTMXXXXXXXXXXXXXXX 136
VFSEDLFFIYLLPPIIFNAGFQVKKKQFFRNFMTITLFGA+GT+
Sbjct: 76 LVFSEDLFFIYLLPPIIFNAGFQVKKKQFFRNFMTITLFGAIGTLISFSVISLGSLGLIS 135
Query: 137 RMNIGTLDVGDFLAIGAIFSATDSVCTLQVLNQDETPFLYSLVFGEGVVNDATSIVLFNA 196
R+NIG+LD+GD+LA+GAIFSATDSVCTLQVLNQDETPFLYSLVFGEGVVNDATS+VLFNA
Sbjct: 136 RLNIGSLDLGDYLALGAIFSATDSVCTLQVLNQDETPFLYSLVFGEGVVNDATSVVLFNA 195
Query: 197 LQNFDLVHIDAAVVLKFLGNFFYLFLSSTFLGVFAGLLSAYIIKKLYIGRHSTDREVXXX 256
+QNFDL + + L+F+GNF YLF +STFLGV AGLLSAYIIKKLY GRHSTDREV
Sbjct: 196 MQNFDLANFSSVKFLQFIGNFLYLFATSTFLGVAAGLLSAYIIKKLYFGRHSTDREVSIM 255
Query: 257 XXXXXXXXXXXXXXDLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHAFATLSFIAETFL 316
DLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHAFATLSFIAETFL
Sbjct: 256 MLMAYLSYMLAELLDLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHAFATLSFIAETFL 315
Query: 317 FLYVGMDALDIEKWEFASD--RPXXXXXXXXXXXXXXXXXRAAFVFPLSFLSNLTKKAPN 374
FLYVGMDALD+EKW+ + P RAAFVFPLSFL+NLTKK
Sbjct: 316 FLYVGMDALDMEKWKIVGETFSPMKSIALSSTILFLVLVARAAFVFPLSFLANLTKKTEE 375
Query: 375 EKITWRQQVVIWWAGLMRGAVSIALAYNKFTRSGHTQLHGNAIMITSTITVVLFSTMVFG 434
KI+ +QQV+IWWAGLMRGAVSIALAYNKFTRSGHTQL NAIMITSTITVVLFSTMVFG
Sbjct: 376 GKISIKQQVIIWWAGLMRGAVSIALAYNKFTRSGHTQLPSNAIMITSTITVVLFSTMVFG 435
Query: 435 MMTKPLIRLLLPAS--GHPVTXXXXXXXXXXXXXXXXMQGSDL--ESTTNIVRPSSLRML 490
++TKPLIRLL+PA + + GSD+ E I RP+SLR+L
Sbjct: 436 LLTKPLIRLLIPARHLNRESSALSDPPSPKSFLDPLILNGSDVDPEIGVGIRRPTSLRLL 495
Query: 491 LTKPTHTVHYYWRKFDDALMRPMFGGRGFVPFSPGSPTEQS 531
L PT +VH+YWRKFD+A MRP+FGGRGFVPF PGSPTE+S
Sbjct: 496 LASPTQSVHHYWRKFDNAFMRPVFGGRGFVPFVPGSPTERS 536
>Os05g0148600 Similar to Na+/H+ antiporter
Length = 544
Score = 678 bits (1749), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/541 (64%), Positives = 401/541 (74%), Gaps = 13/541 (2%)
Query: 1 MGMEVAAARL--GALYTTSDYASVVSINLFVALLCACIVLGHLLEENRWVNESITALIIG 58
MG+++ A L G L SDY S+V+IN+FVALLC+CIV+GHLLE NRWVNESITAL++G
Sbjct: 1 MGLDLGALVLKSGGLLV-SDYDSIVAINIFVALLCSCIVIGHLLEGNRWVNESITALVMG 59
Query: 59 LCTGVVILLMTKGKSSHLFVFSEDLFFIYLLPPIIFNAGFQVKKKQFFRNFMTITLFGAV 118
L TG VILL++ GK+SH+ VFSEDLFFIYLLPPIIFNAGFQVKKKQFFRNFMTI LFGAV
Sbjct: 60 LITGGVILLVSGGKNSHILVFSEDLFFIYLLPPIIFNAGFQVKKKQFFRNFMTIILFGAV 119
Query: 119 GTMXXXXXXXXXXXXXXXRMNIGTLDVGDFLAIGAIFSATDSVCTLQVLNQDETPFLYSL 178
GT+ ++++G L +GD+LAIGAIFSATDSVCTLQVLNQDETP LYSL
Sbjct: 120 GTLISFVIISLGAMTLFKKLDVGPLQLGDYLAIGAIFSATDSVCTLQVLNQDETPLLYSL 179
Query: 179 VFGEGVVNDATSIVLFNALQNFDLVHIDAAVVLKFLGNFFYLFLSSTFLGVFAGLLSAYI 238
VFGEGVVNDATS+VLFNA+++ D+ + D+ V+L F+GNF YLF +ST LGV AGLLSAYI
Sbjct: 180 VFGEGVVNDATSVVLFNAIEDIDIANFDSLVLLAFIGNFLYLFFTSTLLGVVAGLLSAYI 239
Query: 239 IKKLYIGRHSTDREVXXXXXXXXXXXXXXXXXDLSGILTVFFCGIVMSHYTWHNVTESSR 298
IKKL RHSTDREV DLSGILTVFF GIVMSHYTWHNVTESSR
Sbjct: 240 IKKLCFARHSTDREVAIMILMAYLSYMLSMLLDLSGILTVFFSGIVMSHYTWHNVTESSR 299
Query: 299 VTTKHAFATLSFIAETFLFLYVGMDALDIEKWEFASDRPXXXXXXXXXXXXXXXXXRAAF 358
+TTKH FATLSFIAE FLFLYVGMDALDIEKW+ AS P RAAF
Sbjct: 300 ITTKHTFATLSFIAEIFLFLYVGMDALDIEKWKLASSSPKKPIALSATILGLVMVGRAAF 359
Query: 359 VFPLSFLSNLTKKAPNEKITWRQQVVIWWAGLMRGAVSIALAYNKFTRSGHTQLHGNAIM 418
VFPLSFLSNL+KK KI+++QQV+IWWAGLMRGAVSIALAY+KFT SGHT+L NAIM
Sbjct: 360 VFPLSFLSNLSKKETRPKISFKQQVIIWWAGLMRGAVSIALAYHKFTASGHTELRINAIM 419
Query: 419 ITSTITVVLFSTMVFGMMTKPLIRLLLPASGHPVTXXXXXXXXXXXXXXXXMQGSDLEST 478
ITST+ VVLFSTMVFG TKPL+ LL+P P + GSD +
Sbjct: 420 ITSTVIVVLFSTMVFGFFTKPLLNLLIPP--RPDIAADLSSQSIIDPLLGSLLGSDFD-- 475
Query: 479 TNIVRPS---SLRMLLTKPTHTVHYYWRKFDDALMRPMFGGRGFVPFSPGSPTEQS-HGG 534
+ +PS +L++LLT T +VH WRKFDD MRPMFGGRGFVPF PGSP E+S HG
Sbjct: 476 --VGQPSPQNNLQLLLTIQTRSVHRVWRKFDDRFMRPMFGGRGFVPFVPGSPVERSIHGS 533
Query: 535 R 535
+
Sbjct: 534 Q 534
>Os06g0318500 Sodium/hydrogen exchanger family protein
Length = 633
Score = 452 bits (1164), Expect = e-127, Method: Compositional matrix adjust.
Identities = 259/534 (48%), Positives = 315/534 (58%), Gaps = 59/534 (11%)
Query: 25 INLFVALLCACIVLGHLLEENRWVNESITALIIGLCTGVVILLMTKGKSSHLFVFSEDLF 84
I +F A+LC C+V GHLLEEN+WVNESITAL+IG G +I L+++GK+S + F E LF
Sbjct: 28 ICVFTAVLCVCLVAGHLLEENKWVNESITALLIGCVVGAIIFLLSEGKNSRILRFDEQLF 87
Query: 85 FIYLLPPIIFNAGFQVKKKQFFRNFMTITLFGAVGTMXXXXXXXXXXXXXXXRMNIGTLD 144
FIY+LPPIIFNAGFQVKKKQFF NF+TI FG G ++ G L
Sbjct: 88 FIYVLPPIIFNAGFQVKKKQFFHNFLTIMSFGIFGVFISVAIVSTGCYWLFPKVGFGDLG 147
Query: 145 VGDFL--------AIGAIFSATDSVCTLQVLNQDETPFLYSLVFGEGVVNDATSIVLFNA 196
D+L A+GAIFS+TD+VCTLQV++QDETP LYSLVFGEGVVNDATS+VLFNA
Sbjct: 148 AVDYLDLILFTTTALGAIFSSTDTVCTLQVISQDETPRLYSLVFGEGVVNDATSVVLFNA 207
Query: 197 LQNFDLVHIDAAVVLKFLGNFFYLFLSSTFLGVFAGLLSAYIIKKLYIGRHSTDREVXXX 256
++N D+ + V LK + +F YLF +ST LGV GL +AY +K LY GRHSTDREV
Sbjct: 208 IKNLDITQLKGGVALKVISDFLYLFFTSTMLGVTIGLSTAYALKALYFGRHSTDREVALM 267
Query: 257 XXXXXXXXXXXXXX--DLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHAFATLSFIAET 314
DLSGIL VFFCGIVMSHY WHNVTESSR+TT+H FATLSFIAET
Sbjct: 268 ALMAYLSYMLAEGKFLDLSGILMVFFCGIVMSHYAWHNVTESSRITTRHIFATLSFIAET 327
Query: 315 FLFLYVGMDALDIEKWEFASDRPXXXXXXXXXXXXXXXXXRAAFVFPLSFLSNL----TK 370
F+FLYVGMDALDI+KW+ + RAAFVFPLS +SN ++
Sbjct: 328 FIFLYVGMDALDIDKWKTSETSFKTSLGIFGIIISLVLLGRAAFVFPLSIMSNYMSGSSE 387
Query: 371 KAPNEKITWRQQVVIWWAGLMRGAVSIALAYNKFTRSGHTQLHGNAIMITSTITVVLFST 430
KAP IT+ Q FT SG T +A +ITSTI VV F+T
Sbjct: 388 KAP---ITFNHQ---------------------FTFSGVTLDPVHATIITSTIIVVFFTT 423
Query: 431 MVFGMMTKPLIRLLLPASGHPVTXXXXXXXXXXXXXXXXMQ-------GSDLESTTN--- 480
+VFG +T+PLI +LP T D E++ +
Sbjct: 424 LVFGFLTRPLISAILPHQHRQSTTPGTGGGGRSTGSNSPKDDFIMPFLSPDEEASGSGSG 483
Query: 481 -IVRPSSLRMLLTKPTHTVHYYWRKFDDALMRPMFGGRGFVPFSPGSPTEQSHG 533
+ S+ MLL +P HTVH YWRKFDD MRP+FGG P E+ G
Sbjct: 484 FLQAKRSISMLLERPVHTVHIYWRKFDDRFMRPIFGG----------PMERDRG 527
>Os09g0286400 Sodium/hydrogen exchanger subfamily protein
Length = 535
Score = 155 bits (393), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 131/416 (31%), Positives = 199/416 (47%), Gaps = 28/416 (6%)
Query: 23 VSINLFVALLCACIVLGHLLEENR--WVNESITALIIGLCTG-VVILLMTKGKSSHLFVF 79
V I L +++L VLGH+L +R ++ E+ +L+IGL G + + T+ + F F
Sbjct: 36 VGILLQISMLVLSFVLGHVLRRHRFYYLPEASASLLIGLVVGGLANISNTETNTRMWFNF 95
Query: 80 SEDLFFIYLLPPIIFNAGFQVKKKQFFRNFMTITLFGAVGTMXXXXXXXXXXXXXXXRMN 139
++ FF++LLPPIIF +GF + K FF NF I F +GT
Sbjct: 96 HDEFFFLFLLPPIIFQSGFSLSPKPFFANFGAIVTFAILGTFIASVVTGVLVYLGGLTFL 155
Query: 140 IGTLDVGDFLAIGAIFSATDSVCTLQVLNQDETPF-LYSLVFGEGVVNDATSIVLFNALQ 198
+ L + L GA+ SATD V L + + T LY+LVFGE V+NDA +I L+ +
Sbjct: 156 MYKLPFVECLMFGALISATDPVTVLSIFQELGTDVNLYALVFGESVLNDAMAISLYRTM- 214
Query: 199 NFDLVHIDAAVVLKF---LGNFFYLFLSSTFLGVFAGLLSAYIIKKLYIG---RHSTDRE 252
LV AA F + F F+ S GV G +SA + K Y G + + E
Sbjct: 215 --SLVRSQAAAGENFFMMVFQFLETFVGSLSSGVGVGFISALLFK--YAGLDIDNLQNLE 270
Query: 253 VXXXXXXXXXXXXXXXXXDLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHAFATLSFIA 312
LSGI+++ F G+VM HYT+ N++ +S+ F LS +A
Sbjct: 271 CCLFVLFPYFSYMLAEGLGLSGIVSILFTGMVMKHYTFSNLSNNSQRFVSAFFHLLSSLA 330
Query: 313 ETFLFLYVGMD-ALDIEKWEFASDRPXXXXXXXXXXXXXXXXXRAAFVFPLSFLSNLTKK 371
ETF+F+Y+G D A++ W RA VF ++L N+++
Sbjct: 331 ETFVFIYMGFDIAMEEHSWSHVG--------FIFFSIIFIIIARAVNVFSCAYLVNMSRP 382
Query: 372 APNEKITWRQQVVIWWAGLMRGAVSIALAYNKFTRSGHTQLHGNAIMITSTITVVL 427
+ +I + Q +W++GL RGA++ ALA + + HG I T+T VVL
Sbjct: 383 E-HRRIPLKHQKALWFSGL-RGAMAFALALQ--SANELPGGHGKTIFTTTTAIVVL 434
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.327 0.140 0.424
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 14,468,181
Number of extensions: 492552
Number of successful extensions: 1144
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 1121
Number of HSP's successfully gapped: 5
Length of query: 535
Length of database: 17,035,801
Length adjustment: 106
Effective length of query: 429
Effective length of database: 11,501,117
Effective search space: 4933979193
Effective search space used: 4933979193
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 158 (65.5 bits)