Os06g0318500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Sodium/hydrogen exchanger family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os06g0318500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Sodium/hydrogen exchanger family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 144.04 | 0.564 | 3.36 | -0.3 | 0.108 | -0.815 | -0.283 | 0.649 | 0.19 | 15.5 | 999.1 | 1390 | -- | -- |
| 144.07 | 0.559 | 3.35 | -0.272 | 0.109 | -0.693 | -0.287 | -- | 0.186 | 15.4 | 999.1 | 1390 | -- | -- |
| 144.28 | 0.559 | 3.36 | -0.307 | 0.109 | -0.831 | -- | 0.758 | 0.188 | 15.9 | 999.1 | 1390 | -- | -- |
| 144.32 | 0.56 | 3.35 | -0.275 | 0.11 | -0.697 | -- | -- | 0.188 | 15.9 | 999.2 | 1390 | -- | -- |
| 144.92 | 0.561 | 3.36 | -0.322 | -- | -0.868 | -- | 0.926 | 0.187 | -- | 999.2 | 1390 | -- | -- |
| 152.22 | 0.578 | 3.36 | -0.173 | 0.111 | -- | -0.311 | -- | 0.152 | 15.4 | -- | -- | -- | -- |
| 152.51 | 0.578 | 3.36 | -0.179 | 0.113 | -- | -- | -- | 0.15 | 16 | -- | -- | -- | -- |
| 144.98 | 0.561 | 3.35 | -0.279 | -- | -0.699 | -- | -- | 0.185 | -- | 999.2 | 1390 | -- | -- |
| 146.28 | 0.563 | 3.35 | -- | 0.108 | -0.642 | -- | -- | 0.206 | 15.7 | 999.2 | 1390 | -- | -- |
| 153.2 | 0.578 | 3.36 | -0.184 | -- | -- | -- | -- | 0.147 | -- | -- | -- | -- | -- |
| 153.35 | 0.579 | 3.36 | -- | 0.116 | -- | -- | -- | 0.17 | 15.9 | -- | -- | -- | -- |
| 146.99 | 0.565 | 3.35 | -- | -- | -0.64 | -- | -- | 0.212 | -- | 999.2 | 1390 | -- | -- |
| 154.09 | 0.579 | 3.36 | -- | -- | -- | -- | -- | 0.168 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 141.65 | atmosphere | 1000 | 1440 | < th | dose dependent | rect. | 3 | 2 |
| 11 | 141.88 | radiation | 40 | 1440 | > th | dose dependent | rect. | 8 | 2 |
| 28 | 141.89 | radiation | 40 | 10 | > th | dose independent | sin | 9 | NA |
| 53 | 142.21 | radiation | 40 | 270 | < th | dose independent | rect. | 4 | 12 |
| 97 | 142.76 | radiation | 40 | 10 | > th | dose dependent | sin | 10 | NA |
| 108 | 142.93 | radiation | 20 | 270 | > th | dose dependent | rect. | 14 | 20 |
| 110 | 142.98 | atmosphere | 1000 | 1440 | > th | dose independent | rect. | 3 | 2 |
| 115 | 143.00 | radiation | 40 | 720 | < th | dose independent | rect. | 4 | 9 |
| 118 | 143.01 | atmosphere | 1000 | 1440 | < th | dose independent | rect. | 3 | 3 |
| 120 | 143.01 | atmosphere | 1000 | 1440 | < th | dose dependent | rect. | 7 | 1 |
| 132 | 143.09 | atmosphere | 1000 | 1440 | > th | dose independent | rect. | 22 | 8 |
| 133 | 143.09 | atmosphere | 1000 | 720 | > th | dose independent | rect. | 19 | 14 |
| 137 | 143.10 | atmosphere | 1000 | 1440 | < th | dose independent | rect. | 22 | 8 |
| 142 | 143.12 | radiation | 40 | 1440 | < th | dose independent | rect. | 9 | 1 |
| 160 | 143.16 | radiation | 40 | 1440 | < th | dose independent | rect. | 5 | 7 |
| 165 | 143.16 | radiation | 40 | 1440 | < th | dose independent | rect. | 16 | 20 |
| 166 | 143.17 | radiation | 40 | 1440 | < th | dose independent | rect. | 7 | 5 |
| 169 | 143.17 | radiation | 40 | 1440 | < th | dose independent | rect. | 24 | 12 |
| 171 | 143.17 | radiation | 40 | 90 | < th | dose independent | rect. | 4 | 21 |
| 179 | 143.18 | radiation | 40 | 1440 | < th | dose independent | rect. | 19 | 17 |
| 201 | 143.23 | atmosphere | 1000 | 1440 | < th | dose dependent | sin | 8 | NA |
| 225 | 143.28 | radiation | 20 | 270 | > th | dose dependent | sin | 12 | NA |
| 226 | 143.28 | humidity | 70 | 90 | < th | dose dependent | rect. | 8 | 3 |
| 233 | 143.29 | radiation | 40 | 720 | < th | dose independent | rect. | 4 | 20 |
| 298 | 143.40 | humidity | 60 | 90 | < th | dose independent | rect. | 16 | 19 |
| 300 | 143.41 | radiation | 40 | 1440 | < th | dose independent | sin | 10 | NA |
| 308 | 143.42 | radiation | 40 | 270 | > th | dose independent | sin | 12 | NA |
| 309 | 143.42 | humidity | 60 | 90 | < th | dose independent | rect. | 8 | 3 |
| 335 | 143.44 | radiation | 40 | 270 | > th | dose independent | rect. | 14 | 20 |
| 416 | 143.57 | atmosphere | 1000 | 1440 | < th | dose independent | sin | 9 | NA |
| 422 | 143.57 | humidity | 70 | 270 | < th | dose dependent | rect. | 19 | 16 |
| 423 | 143.58 | atmosphere | 1000 | 1440 | > th | dose independent | sin | 9 | NA |
| 468 | 143.68 | atmosphere | 1000 | 720 | > th | dose independent | rect. | 21 | 17 |
| 474 | 143.69 | humidity | 70 | 270 | < th | dose dependent | rect. | 6 | 5 |
| 509 | 143.73 | atmosphere | 1000 | 720 | > th | dose independent | rect. | 21 | 19 |
| 511 | 143.73 | radiation | 40 | 10 | > th | dose independent | rect. | 14 | 22 |
| 521 | 143.75 | radiation | 20 | 720 | > th | dose independent | sin | 11 | NA |
| 531 | 143.77 | radiation | 40 | 10 | > th | dose independent | rect. | 9 | 3 |
| 582 | 143.79 | radiation | 40 | 30 | < th | dose independent | sin | 8 | NA |
| 627 | 143.84 | atmosphere | 1000 | 720 | < th | dose dependent | rect. | 24 | 17 |
| 637 | 143.86 | humidity | 60 | 10 | < th | dose independent | sin | 8 | NA |
| 699 | 143.94 | radiation | 30 | 270 | > th | dose independent | rect. | 7 | 1 |
| 791 | 143.99 | radiation | 30 | 270 | > th | dose independent | sin | 7 | NA |
| 797 | 143.99 | radiation | 40 | 720 | < th | dose independent | rect. | 19 | 21 |
| 819 | 144.01 | radiation | 40 | 270 | < th | dose independent | rect. | 19 | 23 |
| 836 | 144.03 | radiation | 40 | 1440 | > th | dose independent | rect. | 8 | 2 |
| 917 | 144.08 | humidity | 60 | 10 | > th | dose independent | sin | 8 | NA |
| 942 | 144.09 | humidity | 60 | 10 | < th | dose dependent | sin | 8 | NA |
| 945 | 144.09 | temperature | 25 | 4320 | > th | dose dependent | rect. | 23 | 10 |
| 946 | 144.09 | radiation | 40 | 270 | < th | dose dependent | rect. | 4 | 12 |
| 955 | 144.10 | atmosphere | 1000 | 720 | > th | dose independent | rect. | 24 | 17 |