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Os11g0648000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Na+/H+ antiporter.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.9 (0.0162) R2 : 0.88
β1 : -- (--) R2dD : -- R2D : --
β2 : 3.07 (0.06) R2dC : 1.62 R2C : -1.07
β3 : -3.03 (0.054) R2dE : 1.95 R2E : -0.752
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.095 (0.0339) R2dN8 : 0.00245 R2N8 : -0.00867
σ : 0.302
deviance : 42.09
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_____
C
peak time of C : 21.9
E
wheather : radiation
threshold : 6.017
memory length : 192
response mode : < th
dose dependency : dose dependent
G
type of G : sin
peak or start time of G : 7.61
open length of G : --

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
36.1 0.282 11.9 0.0115 3.17 -3.23 1.39 -0.126 -0.0885 22.2 7.908 212 7.66 --
35.77 0.279 11.9 -0.0112 3 -2.94 1.33 -- -0.0893 21.8 6.058 198 7.76 --
37.31 0.284 11.9 -0.0476 3.2 -3.17 -- 1.01 -0.101 22 6.329 189 7.61 --
42.01 0.302 11.9 -0.0585 3.08 -3.05 -- -- -0.1 21.9 5.994 192 7.61 --
74.82 0.403 11.8 -0.00664 -- -2.61 -- -0.769 -0.0408 -- 6.755 725 7.16 --
82.77 0.427 11.8 0.00445 2.25 -- 0.53 -- -0.00773 17.2 -- -- -- --
83.45 0.428 11.8 0.00497 2.26 -- -- -- -0.00508 17.1 -- -- -- --
71.79 0.395 11.8 -0.25 -- -3.01 -- -- -0.0854 -- 1.11 835 9.53 --
42.09 0.302 11.9 -- 3.07 -3.03 -- -- -0.095 21.9 6.017 192 7.61 --
350.32 0.875 11.8 -0.0752 -- -- -- -- -0.0622 -- -- -- -- --
83.45 0.427 11.8 -- 2.26 -- -- -- -0.00563 17.1 -- -- -- --
72.01 0.395 11.8 -- -- -3 -- -- -0.0682 -- 1.38 835 9.5 --
350.47 0.874 11.8 -- -- -- -- -- -0.0539 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 38.89 radiation 10.0 270 < th dose dependent rect. 16 11
2 39.04 radiation 10.0 270 < th dose dependent sin 14 NA
3 39.14 temperature 30.0 270 < th dose independent rect. 17 10
4 39.81 humidity 60.0 270 > th dose independent rect. 17 10
7 40.28 radiation 1.0 270 < th dose independent sin 15 NA
9 40.75 radiation 1.0 270 < th dose independent rect. 16 11
10 40.91 radiation 1.0 270 > th dose independent rect. 11 21
19 41.75 temperature 10.0 270 > th dose dependent rect. 13 18
37 43.33 temperature 10.0 90 > th dose dependent rect. 15 18
47 43.95 precipitation 0.1 270 < th dose independent rect. 3 14
48 43.95 precipitation 0.1 270 < th dose dependent rect. 3 14
50 44.01 temperature 10.0 270 > th dose dependent rect. 12 11
53 44.14 temperature 10.0 270 > th dose independent rect. 17 10
58 44.14 temperature 10.0 270 > th dose independent rect. 3 14
59 44.14 atmosphere 1015.0 270 < th dose independent rect. 3 14
66 44.29 atmosphere 995.0 270 > th dose independent rect. 17 10
77 44.47 wind 9.0 270 < th dose independent rect. 17 10
84 44.68 wind 9.0 270 < th dose independent rect. 3 14
88 44.79 temperature 10.0 270 > th dose dependent rect. 13 5
99 45.05 radiation 1.0 270 > th dose independent rect. 13 6
130 45.64 temperature 10.0 270 > th dose dependent rect. 14 3
179 46.63 precipitation 0.1 270 < th dose independent rect. 13 18
180 46.63 precipitation 0.1 270 < th dose dependent rect. 13 18
186 46.82 radiation 1.0 270 > th dose independent sin 15 NA
217 47.27 precipitation 0.1 270 < th dose independent rect. 17 10
220 47.27 precipitation 0.1 270 < th dose dependent rect. 17 10
235 47.35 humidity 50.0 270 > th dose independent rect. 7 6
240 47.41 temperature 15.0 270 > th dose independent rect. 7 6
241 47.45 wind 9.0 270 < th dose independent rect. 13 18
242 47.45 temperature 15.0 10 > th dose dependent rect. 15 5
243 47.46 wind 1.0 270 > th dose independent rect. 7 6
247 47.53 humidity 50.0 270 > th dose independent rect. 8 14
254 47.66 temperature 20.0 270 > th dose independent rect. 13 5
256 47.66 atmosphere 995.0 270 > th dose independent rect. 7 6
257 47.66 atmosphere 1015.0 270 < th dose independent rect. 7 6
258 47.66 precipitation 0.1 270 < th dose independent rect. 7 6
259 47.66 temperature 10.0 270 > th dose independent rect. 13 18
261 47.66 precipitation 0.1 270 < th dose dependent rect. 7 6
262 47.67 wind 9.0 270 < th dose independent rect. 7 6
267 47.71 temperature 10.0 270 > th dose dependent rect. 15 1
274 47.80 temperature 20.0 270 > th dose independent rect. 14 3
283 47.90 radiation 1.0 270 > th dose independent rect. 8 5
284 47.90 precipitation 0.1 270 < th dose independent rect. 13 5
286 47.90 precipitation 0.1 270 < th dose dependent rect. 13 5
298 48.01 radiation 1.0 270 > th dose independent rect. 14 3
364 48.36 humidity 50.0 270 > th dose independent rect. 17 20
373 48.47 temperature 10.0 270 > th dose dependent rect. 8 4
376 48.50 humidity 90.0 270 < th dose independent rect. 13 5
377 48.52 wind 1.0 270 > th dose independent rect. 14 3
378 48.52 precipitation 0.1 270 < th dose independent rect. 14 3
379 48.52 precipitation 0.1 270 < th dose dependent rect. 14 3
381 48.54 atmosphere 995.0 270 > th dose independent rect. 3 14
382 48.55 wind 9.0 270 < th dose independent rect. 13 5
387 48.60 atmosphere 995.0 270 > th dose independent rect. 18 19
389 48.61 atmosphere 995.0 270 > th dose independent rect. 17 21
392 48.64 wind 9.0 270 < th dose independent rect. 14 3
393 48.65 wind 1.0 270 > th dose independent rect. 13 5
406 48.83 temperature 10.0 270 > th dose independent rect. 14 3
408 48.83 atmosphere 1010.0 270 < th dose independent rect. 14 3
410 48.83 temperature 10.0 270 > th dose independent rect. 17 21
412 48.85 temperature 10.0 270 > th dose independent rect. 13 5
414 48.85 atmosphere 1010.0 270 < th dose independent rect. 13 5
416 48.85 temperature 10.0 270 > th dose independent rect. 18 19
419 48.86 wind 9.0 270 < th dose independent rect. 18 19
440 48.99 radiation 1.0 270 > th dose dependent rect. 14 17
451 49.08 temperature 10.0 270 > th dose dependent rect. 7 6
454 49.11 wind 9.0 270 < th dose independent rect. 17 21
520 49.54 humidity 50.0 270 > th dose independent rect. 16 22
523 49.55 humidity 90.0 270 < th dose independent rect. 14 3
544 49.72 precipitation 0.1 270 < th dose independent rect. 18 19
545 49.72 precipitation 0.1 270 < th dose dependent rect. 18 19
550 49.74 temperature 10.0 90 > th dose independent rect. 15 18
561 49.81 wind 9.0 90 < th dose independent rect. 15 18
572 49.85 wind 7.0 270 < th dose independent rect. 22 10
577 49.88 wind 1.0 270 > th dose independent rect. 17 10
615 50.08 temperature 20.0 270 > th dose independent rect. 15 1
616 50.08 temperature 10.0 270 > th dose independent rect. 22 10
617 50.08 temperature 30.0 270 < th dose independent rect. 22 10
618 50.08 humidity 50.0 270 > th dose independent rect. 22 10
620 50.08 atmosphere 995.0 270 > th dose independent rect. 22 10
621 50.08 temperature 10.0 270 > th dose independent rect. 8 14
651 50.26 radiation 40.0 270 < th dose independent rect. 22 10
661 50.31 radiation 40.0 90 < th dose independent rect. 15 18
666 50.32 precipitation 0.1 270 < th dose independent rect. 22 10
668 50.32 precipitation 0.1 270 < th dose dependent rect. 22 10
687 50.38 radiation 40.0 90 < th dose independent rect. 14 5
802 50.83 temperature 20.0 10 > th dose independent rect. 14 6
816 50.87 radiation 40.0 270 < th dose independent rect. 14 3
843 50.94 radiation 1.0 270 > th dose independent rect. 15 1
846 50.95 wind 9.0 270 < th dose independent rect. 15 1
847 50.95 radiation 40.0 270 < th dose independent rect. 15 1
867 51.03 wind 1.0 270 > th dose independent rect. 15 1
870 51.05 temperature 10.0 270 > th dose independent rect. 15 1
872 51.05 atmosphere 1010.0 270 < th dose independent rect. 15 1
874 51.05 precipitation 0.1 270 < th dose independent rect. 15 1
875 51.05 temperature 10.0 270 > th dose independent rect. 16 23
876 51.05 precipitation 0.1 270 < th dose dependent rect. 15 1
924 51.34 wind 9.0 270 < th dose independent rect. 8 14
966 51.49 humidity 50.0 270 > th dose dependent rect. 17 9
973 51.52 atmosphere 995.0 270 > th dose independent rect. 13 18
974 51.54 wind 1.0 270 > th dose dependent rect. 14 3
996 51.66 temperature 30.0 270 < th dose independent rect. 8 15