Os07g0666900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Na+/H+ antiporter NHX6.
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Os07g0666900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Na+/H+ antiporter NHX6.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 83.84 | 0.43 | 9.13 | -1.06 | 1.17 | -1.14 | 0.000538 | 1.78 | -0.452 | 5.54 | 25.2 | 6020 | -- | -- |
| 85.44 | 0.431 | 9.1 | -0.595 | 1.14 | -1.05 | 0.000417 | -- | -0.502 | 5.57 | 23.57 | 7677 | -- | -- |
| 83.8 | 0.426 | 9.13 | -1.04 | 1.18 | -1.12 | -- | 1.7 | -0.448 | 5.55 | 25.21 | 6091 | -- | -- |
| 85.43 | 0.43 | 9.1 | -0.585 | 1.14 | -1.04 | -- | -- | -0.491 | 5.56 | 23.5 | 7678 | -- | -- |
| 149.6 | 0.57 | 9.15 | -1.01 | -- | -1.16 | -- | 1.4 | -0.48 | -- | 25.21 | 7103 | -- | -- |
| 122.74 | 0.519 | 9 | -0.0321 | 1.17 | -- | 0.104 | -- | -0.0615 | 5.38 | -- | -- | -- | -- |
| 122.76 | 0.519 | 9 | -0.0317 | 1.17 | -- | -- | -- | -0.0619 | 5.4 | -- | -- | -- | -- |
| 150.87 | 0.572 | 9.11 | -0.552 | -- | -1.08 | -- | -- | -0.408 | -- | 25.1 | 8478 | -- | -- |
| 90.17 | 0.442 | 9.05 | -- | 1.14 | -0.773 | -- | -- | -0.258 | 5.61 | 28.5 | 6990 | -- | -- |
| 194.46 | 0.652 | 9.02 | 0.00787 | -- | -- | -- | -- | -0.033 | -- | -- | -- | -- | -- |
| 122.79 | 0.518 | 9 | -- | 1.17 | -- | -- | -- | -0.0584 | 5.4 | -- | -- | -- | -- |
| 154.95 | 0.58 | 9.07 | -- | -- | -0.853 | -- | -- | -0.257 | -- | 28.51 | 7021 | -- | -- |
| 194.47 | 0.651 | 9.02 | -- | -- | -- | -- | -- | -0.0339 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 80.61 | wind | 5 | 43200 | > th | dose dependent | rect. | 10 | 6 |
| 4 | 80.92 | radiation | 30 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 8 | 81.17 | wind | 7 | 43200 | < th | dose independent | rect. | 3 | 14 |
| 14 | 81.33 | wind | 7 | 43200 | > th | dose independent | rect. | 3 | 14 |
| 16 | 81.39 | wind | 7 | 43200 | > th | dose independent | rect. | 24 | 17 |
| 17 | 81.40 | wind | 7 | 43200 | < th | dose independent | rect. | 6 | 11 |
| 23 | 81.43 | wind | 3 | 43200 | > th | dose dependent | rect. | 11 | 3 |
| 30 | 81.55 | wind | 7 | 43200 | > th | dose independent | rect. | 6 | 11 |
| 36 | 81.58 | radiation | 30 | 14400 | < th | dose independent | rect. | 16 | 11 |
| 44 | 81.62 | radiation | 30 | 14400 | < th | dose independent | rect. | 16 | 9 |
| 52 | 81.67 | wind | 7 | 43200 | < th | dose independent | sin | 1 | NA |
| 78 | 81.79 | wind | 5 | 43200 | > th | dose independent | rect. | 9 | 7 |
| 87 | 81.81 | radiation | 1 | 14400 | < th | dose dependent | rect. | 2 | 3 |
| 89 | 81.82 | wind | 7 | 43200 | > th | dose independent | sin | 1 | NA |
| 93 | 81.82 | radiation | 1 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 96 | 81.85 | wind | 5 | 43200 | > th | dose independent | rect. | 10 | 5 |
| 112 | 81.92 | wind | 5 | 43200 | < th | dose independent | rect. | 9 | 6 |
| 156 | 82.12 | wind | 5 | 43200 | > th | dose dependent | rect. | 5 | 12 |
| 157 | 82.12 | wind | 5 | 43200 | > th | dose dependent | rect. | 3 | 14 |
| 161 | 82.15 | wind | 5 | 43200 | > th | dose dependent | sin | 22 | NA |
| 190 | 82.31 | wind | 9 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 279 | 82.67 | wind | 7 | 43200 | < th | dose independent | rect. | 10 | 20 |
| 292 | 82.71 | wind | 7 | 43200 | < th | dose independent | rect. | 10 | 18 |
| 315 | 82.78 | wind | 7 | 43200 | < th | dose independent | rect. | 10 | 15 |
| 320 | 82.78 | wind | 7 | 43200 | > th | dose independent | rect. | 10 | 21 |
| 330 | 82.80 | wind | 5 | 43200 | > th | dose dependent | rect. | 10 | 20 |
| 351 | 82.85 | wind | 7 | 43200 | > th | dose independent | rect. | 10 | 18 |
| 384 | 82.93 | wind | 9 | 43200 | < th | dose dependent | rect. | 10 | 4 |
| 401 | 82.96 | wind | 5 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 470 | 83.08 | temperature | 25 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 486 | 83.12 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 10 |
| 546 | 83.23 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 7 |
| 584 | 83.31 | wind | 7 | 43200 | < th | dose independent | no | NA | NA |
| 623 | 83.38 | wind | 7 | 43200 | > th | dose independent | no | NA | NA |
| 674 | 83.55 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 733 | 83.78 | radiation | 30 | 14400 | > th | dose independent | rect. | 16 | 16 |
| 759 | 83.86 | wind | 7 | 43200 | < th | dose independent | rect. | 13 | 23 |
| 777 | 83.94 | wind | 7 | 43200 | > th | dose independent | rect. | 13 | 23 |
| 851 | 84.17 | radiation | 20 | 14400 | > th | dose dependent | rect. | 16 | 15 |
| 908 | 84.35 | humidity | 70 | 14400 | < th | dose dependent | rect. | 17 | 14 |
| 924 | 84.38 | humidity | 70 | 14400 | < th | dose dependent | rect. | 17 | 4 |
| 936 | 84.39 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 984 | 84.49 | wind | 7 | 43200 | < th | dose independent | rect. | 14 | 2 |