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Os05g0148600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Na+/H+ antiporter.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.1 (0.0191) R2 : 0.73
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.45 (0.0455) R2dC : 0.601 R2C : 0.551
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.613 (0.0402) R2dN8 : 0.178 R2N8 : 0.128
σ : 0.36
deviance : 59.27
__
_____
C
peak time of C : 12.6
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
47.28 0.323 11.1 0.242 1.62 0.662 -0.87 0.148 0.637 12.6 41.3 45 -- --
47.25 0.32 11.1 0.235 1.62 0.674 -0.918 -- 0.636 12.6 41.36 46 -- --
49.88 0.329 11.1 0.227 1.62 0.645 -- 0.703 0.633 12.6 41.25 41 -- --
50.82 0.332 11.1 0.214 1.62 0.631 -- -- 0.632 12.6 40.87 41 -- --
74.84 0.405 11.2 0.124 -- -0.994 -- 1.01 0.608 -- 0.4299 159 -- --
54.79 0.347 11.1 0.246 1.45 -- -0.881 -- 0.641 12.6 -- -- -- --
58.08 0.357 11.1 0.213 1.45 -- -- -- 0.637 12.6 -- -- -- --
59.93 0.361 11.2 0.0996 -- -1.17 -- -- 0.556 -- 0.371 158 -- --
51.98 0.336 11.1 -- 1.62 0.644 -- -- 0.611 12.6 41.29 44 -- --
190.2 0.644 11.2 0.161 -- -- -- -- 0.611 -- -- -- -- --
59.27 0.36 11.1 -- 1.45 -- -- -- 0.613 12.6 -- -- -- --
59.3 0.359 11.2 -- -- -1.17 -- -- 0.553 -- 0.27 136 -- --
190.88 0.645 11.2 -- -- -- -- -- 0.593 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 45.65 temperature 30 720 < th dose independent rect. 17 10
2 45.69 humidity 60 720 > th dose independent rect. 16 13
3 45.79 radiation 10 720 < th dose dependent rect. 17 10
5 46.00 humidity 60 720 > th dose independent rect. 17 10
7 46.01 radiation 20 270 < th dose independent rect. 21 12
10 46.06 humidity 50 720 > th dose dependent rect. 16 13
11 46.09 humidity 60 720 > th dose independent rect. 17 4
12 46.12 radiation 30 270 < th dose dependent rect. 21 12
13 46.14 temperature 30 720 < th dose independent rect. 16 4
16 46.26 radiation 10 90 > th dose dependent sin 6 NA
22 46.43 temperature 30 720 < th dose independent rect. 17 2
23 46.43 humidity 50 720 > th dose independent rect. 15 6
26 46.45 humidity 50 720 > th dose dependent rect. 17 4
29 46.49 radiation 40 30 < th dose independent rect. 23 20
32 46.53 temperature 30 720 < th dose independent rect. 15 6
35 46.55 radiation 10 90 > th dose dependent rect. 6 7
50 46.57 radiation 20 270 < th dose independent sin 9 NA
53 46.57 radiation 40 30 < th dose independent rect. 6 13
110 46.72 radiation 40 90 < th dose independent sin 7 NA
115 46.73 radiation 40 30 > th dose independent rect. 13 23
128 46.80 temperature 15 10 > th dose dependent rect. 20 18
140 46.87 radiation 20 90 < th dose independent rect. 23 14
146 46.94 radiation 1 720 < th dose independent rect. 17 10
147 46.94 radiation 20 90 < th dose independent rect. 23 12
148 46.94 radiation 40 270 < th dose dependent sin 8 NA
166 46.96 radiation 20 720 < th dose independent rect. 3 6
169 46.96 radiation 1 10 > th dose dependent rect. 5 9
239 47.07 radiation 20 90 < th dose independent rect. 23 16
243 47.08 radiation 40 30 < th dose independent sin 21 NA
244 47.08 humidity 50 270 > th dose independent rect. 7 13
265 47.15 radiation 20 270 < th dose dependent rect. 21 16
306 47.21 radiation 10 10 > th dose dependent rect. 15 23
335 47.26 radiation 20 270 < th dose independent rect. 21 16
337 47.26 radiation 10 720 < th dose dependent rect. 16 5
340 47.27 radiation 40 90 > th dose independent sin 8 NA
359 47.32 radiation 20 720 < th dose independent rect. 5 3
360 47.32 humidity 50 720 > th dose independent rect. 24 20
383 47.35 humidity 50 720 > th dose independent rect. 9 18
384 47.35 radiation 1 90 < th dose dependent sin 15 NA
399 47.38 temperature 20 90 > th dose independent rect. 19 18
400 47.38 radiation 40 10 < th dose independent rect. 11 23
404 47.38 radiation 1 90 < th dose dependent rect. 15 15
420 47.42 radiation 1 90 < th dose independent sin 15 NA
453 47.45 radiation 40 90 < th dose independent rect. 11 8
456 47.45 radiation 1 90 < th dose independent rect. 15 15
501 47.52 radiation 40 90 < th dose dependent rect. 23 12
551 47.58 radiation 1 720 > th dose independent rect. 12 7
623 47.61 radiation 40 30 > th dose independent rect. 9 3
688 47.64 wind 1 270 > th dose independent rect. 21 10
704 47.65 humidity 90 270 < th dose independent rect. 12 12
729 47.66 radiation 40 720 < th dose dependent rect. 3 6
739 47.67 radiation 30 720 < th dose dependent rect. 5 3
766 47.69 humidity 50 720 > th dose independent rect. 16 19
767 47.69 radiation 20 30 > th dose independent rect. 16 22
771 47.69 wind 9 270 < th dose dependent rect. 17 20
782 47.71 radiation 40 720 < th dose dependent rect. 15 6
783 47.71 radiation 1 720 < th dose dependent rect. 14 7
790 47.73 radiation 20 30 > th dose independent rect. 7 7
821 47.75 radiation 40 90 < th dose dependent sin 5 NA
830 47.77 radiation 1 270 > th dose independent rect. 10 21
874 47.83 temperature 25 720 < th dose independent rect. 9 2
908 47.85 humidity 50 720 > th dose dependent sin 15 NA
953 47.87 radiation 40 30 < th dose independent rect. 13 23
960 47.88 radiation 1 270 > th dose independent sin 19 NA
986 47.89 radiation 40 30 < th dose independent no NA NA