BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0484900 Os07g0484900|AK060275
(107 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os07g0484900 Protein of unknown function DUF1210 family pro... 176 3e-45
Os10g0150300 Protein of unknown function DUF1210 family pro... 139 5e-34
Os10g0150700 Protein of unknown function DUF1210 family pro... 107 3e-24
Os10g0150400 Protein of unknown function DUF1210 family pro... 102 6e-23
Os10g0150600 Protein of unknown function DUF1210 family pro... 102 7e-23
Os10g0148700 Protein of unknown function DUF1210 family pro... 91 1e-19
Os10g0148100 Protein of unknown function DUF1210 family pro... 77 2e-15
Os03g0245200 Protein of unknown function DUF1210 family pro... 75 8e-15
Os10g0149900 Protein of unknown function DUF1210 family pro... 70 5e-13
Os10g0149000 Protein of unknown function DUF1210 family pro... 68 1e-12
Os10g0149200 Protein of unknown function DUF1210 family pro... 68 1e-12
Os10g0149800 Protein of unknown function DUF1210 family pro... 68 2e-12
Os10g0149400 Protein of unknown function DUF1210 family pro... 65 8e-12
>Os07g0484900 Protein of unknown function DUF1210 family protein
Length = 107
Score = 176 bits (447), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 90/107 (84%), Positives = 90/107 (84%)
Query: 1 RRVRDEAAGKLDGAGAFSVPLAADLRGADSVAQLHSAAKHNAACPGQEPSRIMQLSERTF 60
RRVRDEAAGKLDGAGAFSVPLAADLRGADSVAQLHSAAKHNAACPGQEPSRIMQLSERTF
Sbjct: 1 RRVRDEAAGKLDGAGAFSVPLAADLRGADSVAQLHSAAKHNAACPGQEPSRIMQLSERTF 60
Query: 61 VAVAGKTHCTSPVCASATICKPICQXXXXXXXXXXXXXXXXXTQRRC 107
VAVAGKTHCTSPVCASATICKPICQ TQRRC
Sbjct: 61 VAVAGKTHCTSPVCASATICKPICQPRRRPSRRPSRTLASRRTQRRC 107
>Os10g0150300 Protein of unknown function DUF1210 family protein
Length = 196
Score = 139 bits (350), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 69/78 (88%), Positives = 73/78 (93%)
Query: 6 EAAGKLDGAGAFSVPLAADLRGADSVAQLHSAAKHNAACPGQEPSRIMQLSERTFVAVAG 65
+AAGKLDGAGAF VPLAADLRGAD VAQLHSAA +NAACPGQEPSR+MQLSERTFVAVAG
Sbjct: 67 KAAGKLDGAGAFRVPLAADLRGADCVAQLHSAAHNNAACPGQEPSRVMQLSERTFVAVAG 126
Query: 66 KTHCTSPVCASATICKPI 83
KTH SPVCASATIC+PI
Sbjct: 127 KTHYVSPVCASATICEPI 144
>Os10g0150700 Protein of unknown function DUF1210 family protein
Length = 229
Score = 107 bits (266), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/82 (65%), Positives = 63/82 (76%), Gaps = 2/82 (2%)
Query: 2 RVRDEAAGKLDGAGAFSVPLAADLRGADSVAQLHSAAKHNAACPGQEPSRIMQLSERTFV 61
+AAGKLDG GAFSVPL ADL +D +AQLHSA +N CPGQEPS+I+ +SE TFV
Sbjct: 65 EYESKAAGKLDGTGAFSVPLDADLDSSDCIAQLHSA--NNEPCPGQEPSKIVPMSEGTFV 122
Query: 62 AVAGKTHCTSPVCASATICKPI 83
A+AGKTH S +CASATIC PI
Sbjct: 123 AIAGKTHYPSALCASATICGPI 144
>Os10g0150400 Protein of unknown function DUF1210 family protein
Length = 224
Score = 102 bits (254), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 52/82 (63%), Positives = 59/82 (71%), Gaps = 2/82 (2%)
Query: 2 RVRDEAAGKLDGAGAFSVPLAADLRGADSVAQLHSAAKHNAACPGQEPSRIMQLSERTFV 61
+A GKLDG GAFSVPL ADL +D +AQLHSA N CPGQEPS+I+ +SE TF
Sbjct: 65 EYESKATGKLDGTGAFSVPLDADLHSSDCIAQLHSAT--NEPCPGQEPSKIVPMSEGTFA 122
Query: 62 AVAGKTHCTSPVCASATICKPI 83
AVAGKTH S +CAS TIC PI
Sbjct: 123 AVAGKTHYRSALCASVTICGPI 144
>Os10g0150600 Protein of unknown function DUF1210 family protein
Length = 229
Score = 102 bits (254), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 53/82 (64%), Positives = 60/82 (73%), Gaps = 2/82 (2%)
Query: 2 RVRDEAAGKLDGAGAFSVPLAADLRGADSVAQLHSAAKHNAACPGQEPSRIMQLSERTFV 61
+AAGKLDG+GAFSVPL DL +D +AQLHSA N CPGQEPS+I+ LSE TFV
Sbjct: 65 EYESKAAGKLDGSGAFSVPLDTDLHSSDCIAQLHSAT--NEPCPGQEPSKIVPLSEGTFV 122
Query: 62 AVAGKTHCTSPVCASATICKPI 83
VAGKT S +CASATIC PI
Sbjct: 123 TVAGKTSYPSALCASATICGPI 144
>Os10g0148700 Protein of unknown function DUF1210 family protein
Length = 301
Score = 91.3 bits (225), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/72 (68%), Positives = 54/72 (75%), Gaps = 5/72 (6%)
Query: 1 RRVRDEAAGKLDGAGAFSVPLAADLRGADSVAQLHSAAKHNAACPGQEPSRIMQLSER-- 58
+A G+LDGAGAF+VPLAADLRGAD VAQLHSAA +A CPGQEPS+I LS
Sbjct: 67 EEYESKAVGELDGAGAFAVPLAADLRGADCVAQLHSAAT-DAPCPGQEPSKIEPLSSEGE 125
Query: 59 --TFVAVAGKTH 68
TFVAVAGKTH
Sbjct: 126 TGTFVAVAGKTH 137
>Os10g0148100 Protein of unknown function DUF1210 family protein
Length = 271
Score = 77.0 bits (188), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 56/87 (64%), Gaps = 10/87 (11%)
Query: 6 EAAGKLDGAGAFSVPLAADLRGADS------VAQLHSAAKHNAACPGQEPSRIMQLS--- 56
+A G++ +GAF+VPLAADL G D AQLHSAA N CPGQEPS I+ +
Sbjct: 76 KATGEVGKSGAFAVPLAADLLGDDGELRQQCFAQLHSAAS-NQPCPGQEPSWIVNAAADK 134
Query: 57 ERTFVAVAGKTHCTSPVCASATICKPI 83
++TFVAVAG TH S CASA +C P
Sbjct: 135 KKTFVAVAGDTHFPSSECASAFLCDPF 161
>Os03g0245200 Protein of unknown function DUF1210 family protein
Length = 237
Score = 75.5 bits (184), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 47/89 (52%), Positives = 57/89 (64%), Gaps = 14/89 (15%)
Query: 7 AAGKLDGAGAFSVPLAADLRGADSV------AQLHSAAKHNAACPGQEPSRIMQLSE--- 57
A GK+D +GAFSVPLAADL G D V A+LHSA+ +A CPGQEPS I+ +
Sbjct: 74 AVGKVDKSGAFSVPLAADLVGEDGVLKQDCFARLHSAS--SAPCPGQEPSMIVAAQQPGH 131
Query: 58 ---RTFVAVAGKTHCTSPVCASATICKPI 83
+TFVA+AGK H S CASA +C P
Sbjct: 132 DGAKTFVALAGKVHRPSAECASAFLCDPF 160
>Os10g0149900 Protein of unknown function DUF1210 family protein
Length = 211
Score = 69.7 bits (169), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/88 (54%), Positives = 56/88 (63%), Gaps = 14/88 (15%)
Query: 6 EAAGKLDGAGAFSVPLAAD-LRGA-DSVAQLHSAAKHNAACPGQEPSRIMQLSE------ 57
+A G LDG GAFSVPLAAD L GA D AQLHSA + + CPGQEPS+I+ LS
Sbjct: 75 KAVGDLDGDGAFSVPLAADDLHGAADCFAQLHSA-ESSTPCPGQEPSKIVPLSSTTDNGG 133
Query: 58 ---RTFVAVAGK--THCTSPVCASATIC 80
TFVAVAGK + +S C SA +C
Sbjct: 134 DKANTFVAVAGKRMRYSSSAECNSAFLC 161
>Os10g0149000 Protein of unknown function DUF1210 family protein
Length = 219
Score = 68.2 bits (165), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/88 (56%), Positives = 55/88 (62%), Gaps = 15/88 (17%)
Query: 6 EAAGKLDGAGAFSVPLAAD-LRGA-DSVAQLHSAAKHNAACPGQEPSRIMQLSE------ 57
+A G LDG GAFSVPLAAD L GA D AQLHSAA + CPGQEPS+I+ LS
Sbjct: 68 KAIGDLDGDGAFSVPLAADDLHGAADCFAQLHSAAS-STPCPGQEPSKIVPLSSTTDNGV 126
Query: 58 ---RTFVAVAGK--THCTSPV-CASATI 79
TFVAVAGK TSP C SA +
Sbjct: 127 DKANTFVAVAGKRMYSSTSPAECTSAFL 154
>Os10g0149200 Protein of unknown function DUF1210 family protein
Length = 224
Score = 68.2 bits (165), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/88 (56%), Positives = 55/88 (62%), Gaps = 15/88 (17%)
Query: 6 EAAGKLDGAGAFSVPLAAD-LRGA-DSVAQLHSAAKHNAACPGQEPSRIMQLSE------ 57
+A G LDG GAFSVPLAAD L GA D AQLHSAA + CPGQEPS+I+ LS
Sbjct: 73 KAIGDLDGDGAFSVPLAADDLHGAADCFAQLHSAAS-STPCPGQEPSKIVPLSSTTDNGV 131
Query: 58 ---RTFVAVAGK--THCTSPV-CASATI 79
TFVAVAGK TSP C SA +
Sbjct: 132 DKANTFVAVAGKRMYSSTSPAECTSAFL 159
>Os10g0149800 Protein of unknown function DUF1210 family protein
Length = 206
Score = 67.8 bits (164), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 55/92 (59%), Gaps = 14/92 (15%)
Query: 2 RVRDEAAGKLDGAGAFSVPLAA-DLRGADS-VAQLHSAAKHNAACPGQEPSRIMQLSE-- 57
+A G LDG GAFSVPLAA DL GA AQLHSAA +A CPGQEPS+I+ L
Sbjct: 71 EYESKAVGDLDGDGAFSVPLAADDLHGAAGCFAQLHSAAS-SAPCPGQEPSKIVPLPSTT 129
Query: 58 -------RTFVAVAGKT--HCTSPVCASATIC 80
TFVAVAGK + +S C SA +C
Sbjct: 130 DNGGNKANTFVAVAGKRMHYSSSAECTSAFLC 161
>Os10g0149400 Protein of unknown function DUF1210 family protein
Length = 232
Score = 65.5 bits (158), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 53/92 (57%), Gaps = 15/92 (16%)
Query: 2 RVRDEAAGKLDGAGAFSVPLAAD-LRGA-DSVAQLHSAAKHNAACPGQEPSRIMQLSE-- 57
+A G LDG GAFSVPLAAD L GA D AQLHSA + CPGQEPS+I+ LS
Sbjct: 77 EYESKAVGDLDGDGAFSVPLAADDLHGAADCFAQLHSATS-STPCPGQEPSKIVPLSSTT 135
Query: 58 -------RTFVAVAGK--THCTSPV-CASATI 79
TFV VAGK TSP C SA +
Sbjct: 136 DNGGDKANTFVVVAGKRMHSSTSPAECTSAFL 167
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.321 0.129 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 3,047,457
Number of extensions: 104431
Number of successful extensions: 321
Number of sequences better than 1.0e-10: 13
Number of HSP's gapped: 309
Number of HSP's successfully gapped: 13
Length of query: 107
Length of database: 17,035,801
Length adjustment: 75
Effective length of query: 32
Effective length of database: 13,119,751
Effective search space: 419832032
Effective search space used: 419832032
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 149 (62.0 bits)