FiT-DB / Search/ Help/ Sample detail

Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os10g0150700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein of unknown function DUF1210 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.07 (0.026) R2 : 0.0068
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0967 (0.0547) R2dN8 : 0.00878 R2N8 : 0.0068
σ : 0.49
deviance : 110.05
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
103.65 0.478 3.22 -0.971 0.103 2.52 -0.903 -13 -0.102 6.85 999.8 108 -- --
105.82 0.483 3.07 -0.124 0.109 1.08 -0.874 -- -0.113 6.93 994.9 81 -- --
105.72 0.479 3.21 -0.985 0.105 2.51 -- -12.9 -0.0919 7.31 999.8 106 -- --
106.47 0.484 3.07 -0.15 0.117 0.941 -- -- -0.107 6.95 995.5 25 -- --
106.27 0.48 3.22 -0.979 -- 2.5 -- -12.9 -0.0978 -- 999.8 107 -- --
106.98 0.485 3.07 -0.118 0.101 -- -0.902 -- -0.116 6.9 -- -- -- --
109.06 0.489 3.07 -0.134 0.0986 -- -- -- -0.113 7.52 -- -- -- --
107.18 0.484 3.07 -0.147 -- 0.9 -- -- -0.105 -- 995.5 25 -- --
107.05 0.485 3.07 -- 0.115 0.919 -- -- -0.0908 7.04 995.5 25 -- --
109.58 0.489 3.07 -0.132 -- -- -- -- -0.111 -- -- -- -- --
109.53 0.49 3.07 -- 0.0975 -- -- -- -0.098 7.61 -- -- -- --
107.75 0.485 3.07 -- -- 0.879 -- -- -0.0893 -- 995.5 25 -- --
110.05 0.49 3.07 -- -- -- -- -- -0.0967 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 101.72 atmosphere 1000 270 < th dose independent rect. 12 3
3 101.86 atmosphere 1000 90 < th dose independent rect. 12 6
4 101.90 atmosphere 1000 90 < th dose independent rect. 12 15
6 101.95 atmosphere 1000 270 < th dose independent rect. 13 1
7 102.01 humidity 80 90 < th dose independent rect. 2 4
8 102.03 atmosphere 1000 270 < th dose independent rect. 10 6
14 102.16 atmosphere 1005 10 > th dose dependent rect. 3 1
17 102.26 temperature 20 90 < th dose independent rect. 6 1
20 102.27 atmosphere 1005 10 < th dose dependent rect. 13 5
21 102.28 temperature 20 270 < th dose independent rect. 3 2
28 102.37 humidity 80 90 < th dose dependent rect. 4 3
45 102.44 humidity 80 90 < th dose independent rect. 4 3
51 102.48 atmosphere 1005 270 < th dose dependent rect. 13 1
52 102.48 temperature 20 270 < th dose dependent rect. 3 2
54 102.55 temperature 20 270 < th dose independent rect. 2 5
56 102.55 radiation 30 30 > th dose dependent rect. 15 17
58 102.58 humidity 90 90 < th dose independent rect. 2 2
67 102.61 humidity 80 90 < th dose dependent rect. 2 4
73 102.64 radiation 30 30 > th dose independent rect. 15 17
80 102.67 temperature 20 30 < th dose dependent rect. 6 2
82 102.67 temperature 25 10 < th dose dependent rect. 2 7
83 102.68 atmosphere 1000 30 < th dose independent rect. 16 5
102 102.72 atmosphere 1000 90 < th dose dependent rect. 17 3
106 102.73 atmosphere 1000 90 < th dose independent rect. 18 1
114 102.73 atmosphere 1000 90 < th dose dependent rect. 18 1
115 102.73 atmosphere 1000 10 < th dose dependent rect. 18 2
126 102.75 temperature 30 270 > th dose dependent rect. 13 1
182 102.90 atmosphere 1000 90 < th dose independent rect. 22 20
185 102.92 atmosphere 1000 90 < th dose independent sin 18 NA
207 103.01 atmosphere 1000 90 > th dose independent sin 18 NA
215 103.04 humidity 50 270 < th dose independent rect. 13 1
221 103.04 humidity 50 270 < th dose dependent rect. 13 1
229 103.06 atmosphere 1000 10 < th dose dependent rect. 13 3
277 103.14 humidity 70 10 < th dose dependent rect. 15 18
303 103.22 humidity 70 10 < th dose independent rect. 15 19
348 103.29 temperature 30 270 > th dose dependent rect. 10 5
349 103.30 humidity 70 10 < th dose independent sin 12 NA
437 103.40 humidity 70 10 < th dose dependent sin 12 NA
465 103.44 humidity 80 10 < th dose independent rect. 5 1
471 103.44 humidity 80 10 < th dose dependent rect. 5 1
504 103.48 atmosphere 1005 10 < th dose dependent rect. 13 14
533 103.51 temperature 30 10 > th dose dependent rect. 13 6
562 103.54 humidity 70 10 > th dose independent sin 12 NA
609 103.59 atmosphere 1000 10 > th dose independent sin 17 NA
738 103.69 temperature 30 270 > th dose dependent sin 4 NA
786 103.71 humidity 70 30 < th dose dependent rect. 15 1
811 103.73 humidity 80 1440 > th dose independent rect. 2 3
831 103.75 wind 7 270 > th dose independent rect. 10 6
839 103.75 humidity 70 10 < th dose independent rect. 13 21
872 103.79 wind 7 270 > th dose independent rect. 10 1
888 103.80 humidity 80 720 < th dose independent rect. 2 1
907 103.81 humidity 80 1440 > th dose independent rect. 2 1
909 103.81 atmosphere 1005 90 > th dose independent rect. 2 2
923 103.82 atmosphere 1000 90 < th dose independent no NA NA
954 103.84 radiation 1 30 < th dose dependent rect. 6 2
978 103.87 atmosphere 1000 90 > th dose independent no NA NA
983 103.87 temperature 25 270 < th dose independent rect. 8 16