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Os10g0148100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein of unknown function DUF1210 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.25 (0.032) R2 : 0.521
β1 : -0.74 (0.117) R2dD : 0.0437 R2D : -0.0387
β2 : 1.3 (0.0781) R2dC : 0.292 R2C : 0.224
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.98 (0.0682) R2dN8 : 0.291 R2N8 : 0.184
σ : 0.601
deviance : 164.61
__
_____
C
peak time of C : 9.64
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
149.4 0.574 6.22 -0.614 1.34 0.343 -0.281 2.1 -0.929 9.81 67.06 2717 -- --
150.15 0.571 6.23 -0.574 1.29 0.814 -0.79 -- -1.07 9.72 68.88 7617 -- --
149.66 0.57 6.22 -0.615 1.34 0.343 -- 2.16 -0.93 9.81 67 2679 -- --
149.06 0.569 6.26 -0.582 1.34 0.894 -- -- -1.06 9.51 69 7635 -- --
245.11 0.733 6.28 -0.769 -- 0.458 -- -0.586 -0.972 -- 68.77 2969 -- --
163.88 0.6 6.25 -0.723 1.29 -- -0.439 -- -0.979 9.65 -- -- -- --
164.61 0.601 6.25 -0.74 1.3 -- -- -- -0.98 9.64 -- -- -- --
235.91 0.718 6.28 -0.795 -- 0.505 -- -- -0.959 -- 78.13 3022 -- --
158.45 0.586 6.26 -- 1.36 1.09 -- -- -1.06 9.48 68.8 7635 -- --
264.29 0.76 6.28 -0.751 -- -- -- -- -0.977 -- -- -- -- --
179.05 0.626 6.23 -- 1.3 -- -- -- -0.897 9.68 -- -- -- --
252.56 0.743 6.26 -- -- 0.489 -- -- -0.871 -- 78.13 3022 -- --
279.17 0.78 6.26 -- -- -- -- -- -0.894 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 138.93 wind 9.0 30 < th dose independent rect. 3 23
2 139.70 humidity 90.0 30 > th dose dependent rect. 2 1
3 139.77 temperature 20.0 10 > th dose dependent rect. 2 1
6 139.96 humidity 90.0 30 > th dose independent rect. 2 1
7 139.97 temperature 20.0 30 > th dose independent rect. 2 1
13 140.06 wind 1.0 30 < th dose independent rect. 2 1
16 140.08 atmosphere 995.0 30 > th dose dependent rect. 2 1
19 140.09 atmosphere 1000.0 30 > th dose independent rect. 2 1
22 140.12 wind 9.0 30 < th dose independent rect. 2 1
23 140.12 temperature 10.0 30 > th dose independent rect. 2 1
25 140.12 temperature 30.0 30 < th dose independent rect. 2 1
26 140.12 humidity 50.0 30 > th dose independent rect. 2 1
30 140.12 atmosphere 1010.0 30 < th dose independent rect. 2 1
32 140.12 radiation 1.0 30 < th dose independent rect. 2 1
37 140.12 precipitation 0.1 30 < th dose independent rect. 2 1
38 140.12 temperature 10.0 30 > th dose independent rect. 3 23
39 140.12 wind 3.0 30 < th dose dependent rect. 2 1
40 140.12 radiation 1.0 30 < th dose dependent rect. 2 1
45 140.12 precipitation 0.1 30 < th dose dependent rect. 2 1
55 140.22 atmosphere 1015.0 30 < th dose dependent rect. 2 1
62 140.34 temperature 30.0 30 < th dose dependent rect. 2 1
65 140.41 wind 1.0 30 > th dose independent rect. 2 1
71 140.50 precipitation 0.1 14400 > th dose dependent rect. 17 1
99 140.56 precipitation 0.1 10 < th dose independent rect. 3 23
100 140.56 precipitation 0.1 10 < th dose dependent rect. 3 23
110 141.20 humidity 80.0 1440 < th dose independent rect. 11 1
113 141.39 precipitation 0.1 14400 > th dose independent rect. 17 1
115 141.81 wind 3.0 1440 < th dose independent rect. 2 1
116 141.86 atmosphere 995.0 30 > th dose independent rect. 3 23
117 141.90 precipitation 0.1 14400 < th dose independent rect. 17 1
118 141.90 precipitation 0.1 14400 < th dose dependent rect. 17 1
123 142.04 humidity 80.0 1440 > th dose independent rect. 11 1
126 142.26 wind 3.0 1440 > th dose independent rect. 2 1
127 142.26 precipitation 0.1 4320 < th dose independent rect. 4 3
128 142.26 precipitation 0.1 4320 < th dose dependent rect. 4 3
133 142.66 precipitation 0.1 4320 > th dose dependent rect. 4 2
135 142.85 precipitation 0.1 4320 > th dose independent rect. 4 2
136 142.87 radiation 1.0 4320 < th dose dependent rect. 3 1
138 142.94 radiation 10.0 43200 < th dose dependent rect. 3 1
146 143.00 wind 9.0 1440 < th dose independent rect. 3 1
147 143.00 temperature 10.0 1440 > th dose independent rect. 3 1
150 143.00 temperature 30.0 1440 < th dose independent rect. 3 1
154 143.00 humidity 50.0 1440 > th dose independent rect. 3 1
163 143.00 atmosphere 995.0 1440 > th dose independent rect. 3 1
164 143.00 radiation 1.0 1440 < th dose independent rect. 3 1
184 143.00 temperature 10.0 1440 > th dose independent rect. 4 23
193 143.04 precipitation 0.1 4320 > th dose independent rect. 3 14
196 143.07 precipitation 0.1 4320 > th dose dependent rect. 3 14
197 143.10 precipitation 0.1 4320 < th dose independent rect. 3 14
198 143.10 precipitation 0.1 4320 < th dose dependent rect. 3 14
214 143.61 precipitation 0.1 4320 > th dose dependent rect. 4 5
223 143.92 temperature 25.0 1440 > th dose independent rect. 1 2
226 143.95 temperature 25.0 1440 > th dose dependent rect. 1 1
247 144.24 precipitation 0.1 4320 > th dose dependent rect. 3 11
255 144.39 wind 1.0 4320 > th dose independent rect. 17 2
270 144.51 temperature 25.0 90 > th dose dependent rect. 1 5
287 144.65 wind 3.0 14400 < th dose dependent rect. 1 5
296 144.73 precipitation 0.1 4320 < th dose independent rect. 3 11
299 144.73 precipitation 0.1 4320 < th dose dependent rect. 3 11
303 144.78 precipitation 0.1 4320 > th dose independent rect. 3 11
308 144.85 humidity 80.0 14400 > th dose independent rect. 10 1
316 144.94 temperature 25.0 1440 < th dose independent rect. 24 3
323 145.05 wind 3.0 14400 < th dose dependent rect. 4 2
329 145.14 humidity 80.0 14400 < th dose independent rect. 10 1
331 145.14 humidity 70.0 1440 > th dose dependent rect. 11 1
341 145.28 humidity 60.0 14400 > th dose independent rect. 15 2
355 145.46 humidity 80.0 14400 < th dose dependent rect. 11 1
356 145.47 temperature 25.0 270 > th dose dependent rect. 23 8
365 145.55 humidity 60.0 14400 < th dose independent rect. 14 1
371 145.61 humidity 60.0 14400 < th dose independent rect. 14 3
386 145.68 precipitation 0.1 1440 > th dose independent rect. 5 8
429 146.06 humidity 60.0 30 > th dose dependent rect. 9 18
437 146.16 humidity 80.0 14400 > th dose dependent rect. 9 1
439 146.17 humidity 80.0 1440 < th dose independent rect. 6 6
444 146.20 humidity 50.0 14400 > th dose dependent rect. 11 1
445 146.21 precipitation 0.1 14400 > th dose independent rect. 13 4
455 146.28 temperature 25.0 270 > th dose independent rect. 23 7
457 146.31 precipitation 0.1 14400 < th dose independent rect. 13 4
458 146.31 precipitation 0.1 14400 < th dose dependent rect. 13 4
464 146.36 humidity 80.0 1440 > th dose dependent rect. 7 5
466 146.39 wind 3.0 14400 < th dose independent rect. 24 4
484 146.48 precipitation 0.1 14400 > th dose dependent rect. 12 5
486 146.49 humidity 70.0 14400 < th dose dependent rect. 14 1
489 146.51 humidity 60.0 14400 < th dose independent rect. 11 6
491 146.53 humidity 60.0 14400 < th dose dependent rect. 14 6
519 146.58 humidity 60.0 14400 < th dose dependent rect. 14 3
534 146.63 wind 3.0 14400 < th dose independent rect. 24 6
545 146.66 humidity 60.0 14400 < th dose independent rect. 14 19
546 146.67 precipitation 0.1 4320 < th dose independent sin 3 NA
547 146.67 precipitation 0.1 4320 < th dose dependent sin 3 NA
548 146.67 humidity 90.0 1440 > th dose dependent rect. 7 2
549 146.68 precipitation 0.1 4320 > th dose independent sin 3 NA
557 146.69 humidity 80.0 1440 > th dose independent rect. 6 6
560 146.70 humidity 60.0 14400 > th dose independent rect. 14 19
571 146.76 humidity 80.0 30 > th dose independent rect. 7 20
575 146.77 humidity 60.0 14400 < th dose independent rect. 14 6
599 146.83 humidity 60.0 14400 > th dose independent rect. 14 11
602 146.83 humidity 60.0 14400 > th dose independent rect. 14 14
605 146.83 atmosphere 1015.0 30 < th dose independent rect. 3 23
606 146.83 humidity 70.0 14400 < th dose dependent rect. 11 6
610 146.84 humidity 60.0 14400 > th dose independent rect. 14 6
620 146.84 humidity 60.0 14400 < th dose independent rect. 11 23
628 146.85 humidity 90.0 14400 < th dose dependent rect. 11 4
642 146.90 wind 3.0 14400 < th dose independent rect. 24 2
644 146.90 humidity 80.0 14400 > th dose independent rect. 9 5
655 146.91 humidity 70.0 14400 < th dose dependent rect. 11 22
658 146.92 humidity 60.0 14400 < th dose independent rect. 14 23
661 146.93 humidity 90.0 14400 < th dose dependent rect. 9 7
670 146.96 wind 1.0 1440 < th dose independent rect. 9 11
672 146.96 humidity 90.0 14400 < th dose dependent rect. 14 1
683 146.99 humidity 60.0 14400 < th dose independent rect. 19 22
696 147.01 humidity 60.0 14400 < th dose independent rect. 11 9
742 147.05 humidity 70.0 14400 < th dose dependent rect. 11 10
779 147.09 precipitation 0.1 4320 > th dose dependent sin 5 NA
800 147.15 humidity 60.0 14400 < th dose independent sin 19 NA
818 147.17 precipitation 0.1 14400 < th dose independent rect. 3 17
820 147.17 precipitation 0.1 14400 < th dose dependent rect. 3 17
821 147.18 precipitation 0.1 14400 > th dose independent rect. 3 17
876 147.24 humidity 70.0 14400 < th dose dependent rect. 14 23
879 147.25 humidity 70.0 14400 < th dose dependent sin 20 NA
889 147.26 humidity 70.0 14400 < th dose dependent rect. 21 21
892 147.27 humidity 50.0 14400 > th dose dependent rect. 9 7
893 147.27 humidity 70.0 14400 < th dose dependent rect. 8 10
905 147.28 humidity 90.0 14400 > th dose independent rect. 7 1
925 147.29 humidity 60.0 14400 < th dose independent no NA NA
990 147.29 humidity 60.0 14400 < th dose independent rect. 9 23
996 147.29 humidity 60.0 14400 < th dose dependent sin 14 NA