BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0419800 Os07g0419800|AK066281
(265 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os07g0419800 Protein of unknown function DUF1644 family pro... 517 e-147
Os02g0566500 Protein of unknown function DUF1644 family pro... 104 7e-23
Os06g0693700 Protein of unknown function DUF1644 family pro... 100 1e-21
Os04g0448100 Protein of unknown function DUF1644 family pro... 92 6e-19
Os02g0770600 Protein of unknown function DUF1644 family pro... 91 1e-18
Os02g0150900 Protein of unknown function DUF1644 family pro... 87 1e-17
Os01g0612600 Protein of unknown function DUF1644 family pro... 86 3e-17
>Os07g0419800 Protein of unknown function DUF1644 family protein
Length = 265
Score = 517 bits (1331), Expect = e-147, Method: Compositional matrix adjust.
Identities = 253/265 (95%), Positives = 253/265 (95%)
Query: 1 PSFVLLKCSVHTTAPCRGSVSGWIPAGEVRKYLNEKLRTCSHDSCKFVGTYEQLREHART 60
PSFVLLKCSVHTTAPCRGSVSGWIPAGEVRKYLNEKLRTCSHDSCKFVGTYEQLREHART
Sbjct: 1 PSFVLLKCSVHTTAPCRGSVSGWIPAGEVRKYLNEKLRTCSHDSCKFVGTYEQLREHART 60
Query: 61 AHLLAKPAHVDLSRKRTWDRLEREQEVGDVISAIRSQNPGAIIVGDYVIETRDAMSPDEN 120
AHLLAKPAHVDLSRKRTWDRLEREQEVGDVISAIRSQNPGAIIVGDYVIETRDAMSPDEN
Sbjct: 61 AHLLAKPAHVDLSRKRTWDRLEREQEVGDVISAIRSQNPGAIIVGDYVIETRDAMSPDEN 120
Query: 121 TGDESNDEWWRDSIESPDNRYNSPRLLPNEAPESSIIWADERHGLPRFQPQNNRVLPXXX 180
TGDESNDEWWRDSIESPDNRYNSPRLLPNEAPESSIIWADERHGLPRFQPQNNRVLP
Sbjct: 121 TGDESNDEWWRDSIESPDNRYNSPRLLPNEAPESSIIWADERHGLPRFQPQNNRVLPRFS 180
Query: 181 XXXXXXXXXDWHRIRRPSRQSLARRGLLNRPYRNNSDYHGFRPQLFDQPNGSSHRSGINR 240
DWHRIRRPSRQSLARRGLLNRPYRNNSDYHGFRPQLFDQPNGSSHRSGINR
Sbjct: 181 FTNRSSSRSDWHRIRRPSRQSLARRGLLNRPYRNNSDYHGFRPQLFDQPNGSSHRSGINR 240
Query: 241 SLDDPSFVPRRQRLRYTHRSHHIRD 265
SLDDPSFVPRRQRLRYTHRSHHIRD
Sbjct: 241 SLDDPSFVPRRQRLRYTHRSHHIRD 265
>Os02g0566500 Protein of unknown function DUF1644 family protein
Length = 362
Score = 104 bits (259), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 64/105 (60%), Gaps = 1/105 (0%)
Query: 7 KCSVHTTAP-CRGSVSGWIPAGEVRKYLNEKLRTCSHDSCKFVGTYEQLREHARTAHLLA 65
+C++ P CRG V GW R+YLN K R C HD C F+G+Y++L +H + H A
Sbjct: 128 QCAMELACPLCRGDVKGWTVVEPARQYLNRKKRACMHDGCSFIGSYKELCKHVNSKHPSA 187
Query: 66 KPAHVDLSRKRTWDRLEREQEVGDVISAIRSQNPGAIIVGDYVIE 110
KP VD + W + E E+E D IS IRS PGA+I+GDYV+E
Sbjct: 188 KPREVDPAHADEWKKFECERERQDAISTIRSMTPGAVIMGDYVVE 232
>Os06g0693700 Protein of unknown function DUF1644 family protein
Length = 316
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 73/126 (57%), Gaps = 15/126 (11%)
Query: 9 SVHTTAP----------CRGSVSGWIPAGEVRKYLNEKLRTCSHDSCKFVGTYEQLREHA 58
S+H AP CRG V GWI GE R +LN+K R C D C FVG + +L++H
Sbjct: 95 SIHIVAPNVNNRPSCPLCRGDVIGWIVIGEARLHLNQKKRCCEEDCCSFVGNFNELQKHT 154
Query: 59 RTAHLLAKPAHVDLSRKRTWDRLEREQEVGDVISAIRSQNPGAIIVGDYVIETRDAMSPD 118
+ H ++P+ +D +R+ W+ ++ ++ DV+S I +Q P I++GDYVIE D
Sbjct: 155 QQKHPDSRPSEIDPARQVDWENFQQSSDIVDVLSTIHAQVPNGIVLGDYVIEY-----GD 209
Query: 119 ENTGDE 124
+ TG+E
Sbjct: 210 DETGEE 215
>Os04g0448100 Protein of unknown function DUF1644 family protein
Length = 267
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 56/95 (58%)
Query: 16 CRGSVSGWIPAGEVRKYLNEKLRTCSHDSCKFVGTYEQLREHARTAHLLAKPAHVDLSRK 75
CRG V GW R++LN K RTC H+ C F G+Y +LR H R+ H + P +D +
Sbjct: 126 CRGDVKGWTVVEPARRFLNRKRRTCMHEGCSFGGSYRKLRNHVRSNHPSSNPREIDSASL 185
Query: 76 RTWDRLEREQEVGDVISAIRSQNPGAIIVGDYVIE 110
W LE E++ D IS I + NPG+ I+GDY I+
Sbjct: 186 AEWKELEYEKDRQDAISIITALNPGSTIMGDYFID 220
>Os02g0770600 Protein of unknown function DUF1644 family protein
Length = 345
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/100 (47%), Positives = 58/100 (58%), Gaps = 1/100 (1%)
Query: 9 SVHTTAP-CRGSVSGWIPAGEVRKYLNEKLRTCSHDSCKFVGTYEQLREHARTAHLLAKP 67
SV P CRG V GW R YLN K RTC D C FVGTY++LR+H ++ H LAKP
Sbjct: 127 SVDLACPLCRGKVKGWTIVEPARSYLNGKRRTCMQDGCSFVGTYKELRKHVKSEHPLAKP 186
Query: 68 AHVDLSRKRTWDRLEREQEVGDVISAIRSQNPGAIIVGDY 107
VD ++ W LE E+E D +S I + AI+ GDY
Sbjct: 187 REVDPILEQKWRLLEIERERQDALSTITATMGRAIVFGDY 226
>Os02g0150900 Protein of unknown function DUF1644 family protein
Length = 320
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 59/94 (62%)
Query: 16 CRGSVSGWIPAGEVRKYLNEKLRTCSHDSCKFVGTYEQLREHARTAHLLAKPAHVDLSRK 75
CRG V GW+ E R +LN+K R C C +VG + +L++H + H ++P+ +D +R+
Sbjct: 111 CRGDVIGWVVIDEARLHLNQKKRCCEESCCSYVGNFHELQKHTQQKHPNSRPSEIDPARR 170
Query: 76 RTWDRLEREQEVGDVISAIRSQNPGAIIVGDYVI 109
W+ ++ ++ DV+S I +Q P I++GDYVI
Sbjct: 171 VDWENFQQSSDIIDVLSTIHAQVPNGIVLGDYVI 204
>Os01g0612600 Protein of unknown function DUF1644 family protein
Length = 326
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 54/81 (66%)
Query: 16 CRGSVSGWIPAGEVRKYLNEKLRTCSHDSCKFVGTYEQLREHARTAHLLAKPAHVDLSRK 75
CRG VS W + RKYLN K+R C+ +SC+F G Y QLR HAR H +P VD R+
Sbjct: 131 CRGPVSHWTKDYDARKYLNVKVRACTKESCEFRGAYGQLRRHARENHPTVRPTQVDPERQ 190
Query: 76 RTWDRLEREQEVGDVISAIRS 96
R W R+E+++++GD+ S +RS
Sbjct: 191 RDWHRMEQQRDLGDLFSMLRS 211
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.318 0.134 0.426
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 10,087,962
Number of extensions: 440447
Number of successful extensions: 983
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 983
Number of HSP's successfully gapped: 7
Length of query: 265
Length of database: 17,035,801
Length adjustment: 99
Effective length of query: 166
Effective length of database: 11,866,615
Effective search space: 1969858090
Effective search space used: 1969858090
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 155 (64.3 bits)