BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0175100 Os07g0175100|AK064387
(436 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os07g0175100 Homeodomain-like containing protein 756 0.0
Os11g0702700 Homeodomain-like containing protein 333 2e-91
Os01g0838900 Trp repressor/replication initiator domain con... 292 3e-79
Os05g0593000 Conserved hypothetical protein 123 3e-28
Os01g0582600 Conserved hypothetical protein 97 2e-20
Os05g0184901 Sigma factor, regions 3 and 4 domain containin... 92 6e-19
Os05g0183900 91 2e-18
Os04g0644200 Conserved hypothetical protein 86 5e-17
Os05g0208600 81 1e-15
Os06g0210700 74 2e-13
AK120573 70 3e-12
Os05g0184666 68 1e-11
>Os07g0175100 Homeodomain-like containing protein
Length = 436
Score = 756 bits (1951), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/436 (86%), Positives = 375/436 (86%)
Query: 1 KKKNPSXXXXXXXXXXXXXXXXXXXIXXXXXXXXXXXXXMAPVXXXXXXXXXXXXXXXXX 60
KKKNPS I MAPV
Sbjct: 1 KKKNPSKRGRKRGGRGEGREKKVEEISSSSSSRGRGRRRMAPVKKSKKGKRKSKDSGKLK 60
Query: 61 IVKYGGGAPPLPPELRGLDTEWWYTFLHKHSELGLSAPSDEGEAXXXXXXXXXXXXDYIC 120
IVKYGGGAPPLPPELRGLDTEWWYTFLHKHSELGLSAPSDEGEA DYIC
Sbjct: 61 IVKYGGGAPPLPPELRGLDTEWWYTFLHKHSELGLSAPSDEGEAFRYFFRTSRRTFDYIC 120
Query: 121 SIVREDLISRPPSGLINIEGRLLSVEKQVAIAMRRLASGDSQVSVGAAFGVGQSTVSQVT 180
SIVREDLISRPPSGLINIEGRLLSVEKQVAIAMRRLASGDSQVSVGAAFGVGQSTVSQVT
Sbjct: 121 SIVREDLISRPPSGLINIEGRLLSVEKQVAIAMRRLASGDSQVSVGAAFGVGQSTVSQVT 180
Query: 181 WRFIESMEERARHHLVWPGQERMEQIKARFEAESGLPNCCGAIDATHIIMTLPAVESSED 240
WRFIESMEERARHHLVWPGQERMEQIKARFEAESGLPNCCGAIDATHIIMTLPAVESSED
Sbjct: 181 WRFIESMEERARHHLVWPGQERMEQIKARFEAESGLPNCCGAIDATHIIMTLPAVESSED 240
Query: 241 WCDPAKNYSMFLQGIVDDEMRFIDIVTGWPGSMMFSRLLKCSGFFKHCDAGTRLDGPVMV 300
WCDPAKNYSMFLQGIVDDEMRFIDIVTGWPGSMMFSRLLKCSGFFKHCDAGTRLDGPVMV
Sbjct: 241 WCDPAKNYSMFLQGIVDDEMRFIDIVTGWPGSMMFSRLLKCSGFFKHCDAGTRLDGPVMV 300
Query: 301 SAENGEIREYIVGNNCYPLLPWLMTPYEGESLSAPMASFNARQKAARTLGPRALSRLKGS 360
SAENGEIREYIVGNNCYPLLPWLMTPYEGESLSAPMASFNARQKAARTLGPRALSRLKGS
Sbjct: 301 SAENGEIREYIVGNNCYPLLPWLMTPYEGESLSAPMASFNARQKAARTLGPRALSRLKGS 360
Query: 361 WRILNKVMWRPDKNKLPSIILVCCLLHNIIIDCEDELLPDVQLPDHHDTGYSEEKCEQVD 420
WRILNKVMWRPDKNKLPSIILVCCLLHNIIIDCEDELLPDVQLPDHHDTGYSEEKCEQVD
Sbjct: 361 WRILNKVMWRPDKNKLPSIILVCCLLHNIIIDCEDELLPDVQLPDHHDTGYSEEKCEQVD 420
Query: 421 PNGKIMRDVITGYLQI 436
PNGKIMRDVITGYLQI
Sbjct: 421 PNGKIMRDVITGYLQI 436
>Os11g0702700 Homeodomain-like containing protein
Length = 391
Score = 333 bits (853), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 156/319 (48%), Positives = 216/319 (67%), Gaps = 2/319 (0%)
Query: 117 DYICSIVREDLISRPPSGLINIEGRLLSVEKQVAIAMRRLASGDSQVSVGAAFGVGQSTV 176
+YIC +VR++++ R S ++G++LS+E +VA+A+ RL SG S V+VG+A GV STV
Sbjct: 71 NYICGLVRDEMMVRSSSYTF-LDGKVLSLEDRVAVALIRLNSGGSLVTVGSAVGVNHSTV 129
Query: 177 SQVTWRFIESMEERARHHLVWPGQERMEQIKARFEAESGLPNCCGAIDATHIIMTLPAVE 236
S +TWRF+E+MEERA HHL WP +E+IK+ FE GLPNCCG +D THI M L + E
Sbjct: 130 SLITWRFVEAMEERASHHLRWPDSSEVEKIKSMFEKIHGLPNCCGVVDTTHITMCLSSAE 189
Query: 237 -SSEDWCDPAKNYSMFLQGIVDDEMRFIDIVTGWPGSMMFSRLLKCSGFFKHCDAGTRLD 295
+ + W D KNYSM LQ ++ +MRF+DIVTGWPGSM S +L SG FK C+ G RL+
Sbjct: 190 PNCKVWLDHEKNYSMVLQAVISPDMRFMDIVTGWPGSMKESSILHSSGLFKMCEKGARLN 249
Query: 296 GPVMVSAENGEIREYIVGNNCYPLLPWLMTPYEGESLSAPMASFNARQKAARTLGPRALS 355
G MV ++ EI EYI+G+ YPLLPWL+TPY+ + LS FN R AA T+ P L+
Sbjct: 250 GSKMVVSDGSEIGEYIIGDAGYPLLPWLLTPYQEKDLSDSKLEFNKRHAAAITVAPSTLA 309
Query: 356 RLKGSWRILNKVMWRPDKNKLPSIILVCCLLHNIIIDCEDELLPDVQLPDHHDTGYSEEK 415
K +W+ L+ MWRPDK++LP II VCC+LHNIII +D + + + + HD Y ++
Sbjct: 310 NFKDTWKFLHGEMWRPDKHRLPRIIHVCCMLHNIIICLQDATIDEAAMSNDHDANYKQQV 369
Query: 416 CEQVDPNGKIMRDVITGYL 434
C+ D N +RD ++ +L
Sbjct: 370 CQLADENAVRVRDKLSEHL 388
>Os01g0838900 Trp repressor/replication initiator domain containing protein
Length = 396
Score = 292 bits (748), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 149/359 (41%), Positives = 209/359 (58%), Gaps = 9/359 (2%)
Query: 81 EWWYTFLHKHSELGLSAPSDEGEAXXXXXXXXXXXXDYICSIVREDLISRPPSGLINI-- 138
+WW F + L S + + DY+CS++ D +R N
Sbjct: 33 DWWDGFARR---LAAGQFSKDCQNFESVFKMSRKTFDYLCSLISGDF-TRKTQSFRNFRF 88
Query: 139 -EGRLLSVEKQVAIAMRRLASGDSQVSVGAAFGVGQSTVSQVTWRFIESMEERARHHLVW 197
+ +L VE QV +A+ RL +G+S +S+G FG+ S +S +TW+FIE++EERA +HL W
Sbjct: 89 GDKAILGVEDQVGVALLRLTTGESLLSIGNRFGMNHSAISNITWKFIEALEERAANHLKW 148
Query: 198 PGQERMEQIKARFEAESGLPNCCGAIDATHIIMTLPAVESSEDWCDPAKNYSMFLQGIVD 257
P E M +K++FE GLPNCCGAID THI+M A +S W D SM LQ IVD
Sbjct: 149 PTPEEMATVKSKFEKIQGLPNCCGAIDTTHILMCSSAQPNSNVWLDGENRNSMVLQAIVD 208
Query: 258 DEMRFIDIVTGWPGSMMFSRLLKCSGFFKHCDAGTRLDGPVMVSAE--NGEIREYIVGNN 315
+MRF D+V+GWPGS+ S +L+ SGF++ C+ G RLDG + E +R+YI+G+
Sbjct: 209 ADMRFRDVVSGWPGSLNDSCILRTSGFYRLCEKGARLDGQTELPGEPAGSVVRDYILGDA 268
Query: 316 CYPLLPWLMTPYEGESLSAPMASFNARQKAARTLGPRALSRLKGSWRILNKVMWRPDKNK 375
YPLLPWLMTPY + LS A FN R A + AL++LK W++L +WRPDK++
Sbjct: 269 SYPLLPWLMTPYREKDLSPAKADFNKRHAATIMVVQGALAKLKERWQVLKGELWRPDKHR 328
Query: 376 LPSIILVCCLLHNIIIDCEDELLPDVQLPDHHDTGYSEEKCEQVDPNGKIMRDVITGYL 434
LP II VCCLL NI+ID ED + +HD GY ++ + D +RD + Y+
Sbjct: 329 LPRIIYVCCLLTNIMIDLEDAARGGMPPSHNHDDGYRQQFSDVADVGAAALRDQLCQYV 387
>Os05g0593000 Conserved hypothetical protein
Length = 423
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 134/300 (44%), Gaps = 21/300 (7%)
Query: 143 LSVEKQVAIAMRRLASGDSQVSVGAAFGVGQSTVSQVTWRFIESMEERAR-HHLVWPGQE 201
+ V ++VA+ + RLA+G+ V FG+G ST ++ ++ L WP
Sbjct: 129 IPVRQRVAVCVWRLATGEPLRVVSKRFGLGISTCHKLILEVCAAIRNLLMPRFLHWPDHP 188
Query: 202 RMEQIKARFEAESGLPNCCGAIDATHIIMTLPAVESS------EDWCDPAKNYSMFLQGI 255
K RFEA SG+P GA+ THI + P V + + +YS+ LQG+
Sbjct: 189 TSTAYKTRFEATSGVPGVVGAMYTTHIPIIAPKVSVAAYLNRRHTERNHKTSYSITLQGV 248
Query: 256 VDDEMRFIDIVTGWPGSMMFSRLLKCSGFFKHCDAGTRLDGPVMVSAENGEIREYIVGNN 315
V + F D+ GWPGSM ++L+ S + SA G + ++VG
Sbjct: 249 VGPDGTFTDVCIGWPGSMSDEQVLRKSALHQR------------ASAAAGSM-SWVVGGA 295
Query: 316 CYPLLPWLMTPYEGESLSAPMASFNARQKAARTLGPRALSRLKGSWRILNKVMWRPDKNK 375
YPL W++ PY +L+ +FN + R + A RLKG W L K
Sbjct: 296 SYPLTEWMLVPYAQRNLTWTQHAFNEKVGEVRRVATEAFVRLKGRWACLQKRT-EVKLQD 354
Query: 376 LPSIILVCCLLHNIIIDCEDELLPDVQLPDHHDTGYSEEKCEQVDPNGKIMRDVITGYLQ 435
LP+++ CC+LHNI +++ PD++ D + Q + K+ D+ L
Sbjct: 355 LPAVLAACCVLHNICETRGEDMDPDLRCDLPPDEEEDDTVLVQSESANKVRDDIAHNLLH 414
>Os01g0582600 Conserved hypothetical protein
Length = 500
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 126/277 (45%), Gaps = 35/277 (12%)
Query: 117 DYIC-----SIVREDLISRPPSGLINIEGRLLSVEKQVAIAMRRLASGDSQVSVGAAFGV 171
D IC ++ +ED + R + V ++VA+ + RLA+G+ V FG+
Sbjct: 237 DMICEALGSAVAKEDTMLRAA----------IPVRQRVAVCIWRLATGEPLRLVSKRFGL 286
Query: 172 GQSTVSQVTWRFIESMEERAR-HHLVWPGQERMEQIKARFEAESGLPNCCGAIDATHIIM 230
G ST ++ +++ L WP + K RF+A G+P GA+ THI +
Sbjct: 287 GISTCHKLVLEVCAAIKSVLMPRFLQWPDEAAAAAFKERFQAAYGVPGVIGAMYTTHIPI 346
Query: 231 TLPAVESSEDWC------DPAKNYSMFLQGIVDDEMRFIDIVTGWPGSMMFSRLLKCSGF 284
P + + + + +YS+ LQG+V + F D+ GWPGSM ++L+ S
Sbjct: 347 IAPKISVAAYFNRRHTERNQKTSYSITLQGVVGPDGAFTDVCIGWPGSMPDDQVLEKSML 406
Query: 285 FKHCDAGTRLDGPVMVSAENGEIREYIVGNNCYPLLPWLMTPYEGESLSAPMASFNARQK 344
+ AG +M SA +VG YPL+ W++ PY ++L+ +FN +
Sbjct: 407 HQRAAAG------MMHSA-------CLVGGASYPLMDWVLVPYTHQNLTWTQHAFNEKVG 453
Query: 345 AARTLGPRALSRLKGSWRILNKVMWRPDKNKLPSIIL 381
R + A +RLK W L + ++ + +L
Sbjct: 454 DLRRVAVDAFARLKARWACLRSEAAKRARDNIAHNLL 490
>Os05g0184901 Sigma factor, regions 3 and 4 domain containing protein
Length = 468
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 128/291 (43%), Gaps = 29/291 (9%)
Query: 117 DYICSIVREDLISRPPSGLINIEGRLLSVEKQVAIAMRRLASGDSQVSVGAAFGVGQSTV 176
D ++ +ED R + V ++VA+ + RLA+GD V FG+G ST
Sbjct: 148 DLAAAVAKEDTTLRAA----------IPVPQRVAVCLWRLATGDPLREVSRRFGLGISTC 197
Query: 177 SQVTWRFIESMEERARHHLVWPGQERMEQIKARFEAESGLPNCCGAIDATHIIMTLPAVE 236
+ + ++ + WP + +RF+A SG+P GA+ HI + P
Sbjct: 198 HSIILQVCAAITAVLTRVVRWP--DSHAAAASRFQALSGIPGVVGAVHTEHIPIVAPREN 255
Query: 237 SSEDW------CDPAKNYSMFLQGIVDDEMRFIDIVTGWPGSMMFSRLLKCSGFFKHCDA 290
+ E + + YS+ +Q +VD + F D+ G PGS+ + +L S + C+A
Sbjct: 256 AGEYYDRRLTDRNNKATYSVAMQAVVDADGAFTDVCIGHPGSLSDAAVLTKSALYARCEA 315
Query: 291 GTRLDGPVMVSAENGEIREYIVGNNCYPLLPWLMTPYEGESLSAPMASFNARQKAARTLG 350
G L G+ +++VG YPL W++ PY +L+ NAR AR
Sbjct: 316 GLLL----------GDDPQWLVGGASYPLTSWMLVPYAQPNLTWAQERLNARVADARAAA 365
Query: 351 PRALSRLKGSWRILNKVMWRPDKNKLPSIILVCCLLHNIIIDCEDELLPDV 401
A RL+ + +LP+++ CC+LHN+ EL D+
Sbjct: 366 VGAFRRLRAR-WRCLRRRAEVKLPELPNMLGACCVLHNLCERSGGELDADL 415
>Os05g0183900
Length = 483
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 119/257 (46%), Gaps = 21/257 (8%)
Query: 143 LSVEKQVAIAMRRLASGDSQVSVGAAFGVGQSTVSQVTWRFIESMEERARHHLV-WPGQE 201
+ V ++VA+ + RLA+GD V FG+G ST + + ++ +V WP +
Sbjct: 177 IPVPQRVAVCLWRLATGDPLREVSRRFGLGISTCHNIIVQVCAAITAVLLTRVVRWP--D 234
Query: 202 RMEQIKARFEAESGLPNCCGAIDATHIIMTLPAVESSEDW------CDPAKNYSMFLQGI 255
+RF+A S +P GA+ H + P + + + + YS+ +Q +
Sbjct: 235 SHAAAASRFQALSWIPGVVGAVHTEHFRIVAPREHAGKYYDHRLTGRNNKATYSVAMQAV 294
Query: 256 VDDEMRFIDIVTGWPGSMMFSRLLKCSGFFKHCDAGTRLDGPVMVSAENGEIREYIVGNN 315
VD + F D+ G PGS+ + +L S + C+AG L + + ++VG
Sbjct: 295 VDADGAFTDVCIGHPGSLSDAAILAKSALYARCEAGLLLGHDKL----GWQQPLWLVGGA 350
Query: 316 CYPLLPWLMTPYEGESLSAPMASFNARQKAARTLGPRALSRLKGSWRILNKVMWRPDKNK 375
YPL W++ PY +L+ NAR AR A RL+ W+ L + + K
Sbjct: 351 SYPLTSWMLVPYTQPNLTWAQDRLNARVADARAAAVGAFRRLRARWQCLRRA-----EVK 405
Query: 376 LP---SIILVCCLLHNI 389
LP +++ CC+LHN+
Sbjct: 406 LPELANMLGACCVLHNL 422
>Os04g0644200 Conserved hypothetical protein
Length = 435
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 132/305 (43%), Gaps = 47/305 (15%)
Query: 146 EKQVAIAMRRLASGDSQVSVGAAFGVGQSTVS-QVTWRFIESMEERARHHLVWPGQERME 204
+ ++ A+ RLA +V FG+ V+ + + ++ +R L +R+
Sbjct: 159 DHKLGAALFRLAHAAPARAVARRFGLPSPAVAARAFYEVCRTIADRLAILLDLGAPDRIA 218
Query: 205 QIKARFEAESGLPNCCGAIDATHIIMTLPAVESSEDWCDPAKNYSMFLQGIVDDEMRFID 264
+ F A S LPNCCGA+ I ++ Q +VD E RF+D
Sbjct: 219 RAVPGFCALS-LPNCCGALGYARI------------------GDAVIAQALVDAEGRFLD 259
Query: 265 IVTGWPGSMMFSRLLKCSGFFKHCDAGTRLDGPVMVSAENGE-----IREYIVGNNCYPL 319
+ GW +M + +L + + V+ +A +GE + Y +G C P+
Sbjct: 260 VSVGWDTAMAPAEILPRTKLYSS-------QSLVLANAPHGELIGGSVPRYFLGPACCPM 312
Query: 320 LPWLMTPYEGESLSAPMAS---FNARQKAARTLGPRALSRLKGSWRILNKVMWRPD-KNK 375
LPWL+TPY M+ FN L A ++ WR+L++ W+ + +
Sbjct: 313 LPWLVTPYNDMDAKNGMSKESIFNNVHSHGMRLVRNAFGHVRSRWRLLDEC-WKGECQEA 371
Query: 376 LPSIILVCCLLHNIIIDCEDELLPDVQLPDHHDTGYSEEKCE----QVDPNGKIMRDVIT 431
LP +++ CLLHN +I C + PD P+ G + E + D G+ +RDV+
Sbjct: 372 LPYVVVAGCLLHNFLIKCGE---PD---PEEIQEGAAAELFSDFEGEKDKEGERIRDVLA 425
Query: 432 GYLQI 436
+L +
Sbjct: 426 VHLSL 430
>Os05g0208600
Length = 736
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 130/288 (45%), Gaps = 31/288 (10%)
Query: 127 LISRPPSGLINIEGRLLSVEKQVAIAMRRLASGDSQVSVGAAFGVGQSTVSQVTWRFIES 186
L SR + + ++ +SVE+QVA+ ++++ S SVG +F TVS+ + +
Sbjct: 111 LCSRLKNKGLLVDTFHVSVEEQVAMFLKKVGQHHSVPSVGFSFWRSGETVSRYFHIVLRA 170
Query: 187 MEERARHHLVWPGQERMEQIKAR-FEAESGLPNCCGAIDATHIIMTLPAVESSEDWCDPA 245
M E AR + + +I + + C GA+D THI ++PA + D
Sbjct: 171 MCELARELIYVRSADTHTKITSNPNKFYPYFEGCIGALDGTHIRASVPAKKV--DRFRGR 228
Query: 246 KNY-SMFLQGIVDDEMRFIDIVTGWPGSMMFSRLLKCSGFFKHCDAGTRLDGPVMVSAEN 304
K+Y + + VD ++RF I++GW GS S +L+ DA +R +G +
Sbjct: 229 KSYPTQNVLAAVDFDLRFTYILSGWEGSAHDSLVLQ--------DALSRPNGLKIPEG-- 278
Query: 305 GEIREYIVGNNCYPLLPWLMTPYEG-----------ESLSAPMASFNARQKAARTLGPRA 353
+Y + + Y P ++ PY + P FN R + RT RA
Sbjct: 279 ----KYFLADAGYAARPGILPPYRRVRYHLKEFRGPQGPKCPKELFNYRHSSLRTTIERA 334
Query: 354 LSRLKGSWRILNKVMWRPDKNKLPSIILVCCLLHN-IIIDCEDELLPD 400
LK ++IL + P K + +++ CC LHN I+ D DE + D
Sbjct: 335 FGALKNRFKILMNKPFIPLKAQ-AMVVIACCALHNWILDDGHDEFVSD 381
>Os06g0210700
Length = 680
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 124/278 (44%), Gaps = 37/278 (13%)
Query: 143 LSVEKQVAIAMRRLASGDSQVSVGAAFGVGQSTVSQVTWRFIESMEERARHHLVWPGQER 202
+SVE+QVA+ ++++ S VG +F TVS+ + +M E AR +
Sbjct: 100 VSVEEQVAMFLKKVGQHHSVSCVGFSFWRSGETVSRYFRIVLRAMCEIARELIYIRSTNT 159
Query: 203 MEQIKAR-FEAESGLPNCCGAIDATHIIMTLPAVESSEDWCDPAKNY-SMFLQGIVDDEM 260
+I ++ + +C GA+D THI ++PA + D K Y + + VD ++
Sbjct: 160 HSKITSKKNKFYPYFKDCIGALDGTHIRASVPAKKV--DRFRGRKPYPTQNVLAAVDFDL 217
Query: 261 RFIDIVTGWPGSMMFSRLLKCSGFFKHCDAGTRLDGPVMVSAENGEIREYIVGNNCYPLL 320
RFI I+ GW GS S +L+ DA +R +G + + + + + Y
Sbjct: 218 RFIYILAGWEGSAHDSLVLQ--------DALSRPNGLKIPEGK------FFLADAGYAAR 263
Query: 321 PWLMTPY-------------EG----ESLSAPMASFNARQKAARTLGPRALSRLKGSWRI 363
P ++ PY +G + P FN R + RT RA LK ++I
Sbjct: 264 PGILPPYCRVRYHLKEFRGPQGPHGPQGPKCPKELFNYRHSSLRTTIERAFGALKNRFKI 323
Query: 364 LNKVMWRPDKNKLPSIILVCCLLHNIIIDC-EDELLPD 400
L + P K + +++ CC LHN I++ DE + D
Sbjct: 324 LMNKPFIPLKAQ-SMVVIACCALHNWILENGSDEFVND 360
>AK120573
Length = 168
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 77/172 (44%), Gaps = 19/172 (11%)
Query: 169 FGVGQSTVSQVTWRFIESMEERARHHLV-WPGQERMEQIKARFEAESGLPNCCGAIDATH 227
FG+G ST ++ +++ +V WP I A FEA SG+ GAI TH
Sbjct: 1 FGLGISTCHKLVLEVCAALKAMVMPKVVRWPEAGDAAAIAAHFEAISGISGVVGAIYTTH 60
Query: 228 IIMTLPAVESSEDWC------DPAKNYSMFLQGIVDDEMRFIDIVTGWPGSMMFSRLLKC 281
I + P + + + +YSM +Q +VD F D+ GWPGS +L+
Sbjct: 61 IPIIAPKSNVASYYNRRHTERNQKTSYSMTVQCVVDSTGAFTDVCIGWPGSNSDEEVLEK 120
Query: 282 SGFFKHCDAGTRLDGPVMVSAENGEIREYIVGNNCYPLLPWLMTPYEGESLS 333
S + H + G +++VG +PL+ W++ PY ++L+
Sbjct: 121 SALYLHRGVPGLIQG------------QWVVGGGSFPLMDWMLVPYTHQNLT 160
>Os05g0184666
Length = 401
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 74/153 (48%), Gaps = 12/153 (7%)
Query: 248 YSMFLQGIVDDEMRFIDIVTGWPGSMMFSRLLKCSGFFKHCDAGTRLDGPVMVSAENGEI 307
+++ +Q +VDDE F D+ G PGS+ + +L S + C+AG L + +
Sbjct: 207 HNIIVQAVVDDEGAFTDVCIGHPGSLSDAAVLAKSALYARCEAGLLLGHDKL----GWQQ 262
Query: 308 REYIVGNNCYPLLPWLMTPYEGESLSAPMASFNARQKAARTLGPRALSRLKGSWRILNKV 367
++VG YPL W++ PY + + NA AR A RL+ W+ L +
Sbjct: 263 PLWLVGGASYPLTSWMLVPYTQPNQTWAQDRLNAHVADARAAAVGAFRRLRARWQCLRRA 322
Query: 368 MWRPDKNKLP---SIILVCCLLHNIIIDCEDEL 397
+ KLP +++ VCC+LHN+ +EL
Sbjct: 323 -----EVKLPELANMLAVCCVLHNLCERIGEEL 350
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.320 0.137 0.431
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 13,815,434
Number of extensions: 558379
Number of successful extensions: 1455
Number of sequences better than 1.0e-10: 13
Number of HSP's gapped: 1435
Number of HSP's successfully gapped: 13
Length of query: 436
Length of database: 17,035,801
Length adjustment: 104
Effective length of query: 332
Effective length of database: 11,605,545
Effective search space: 3853040940
Effective search space used: 3853040940
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 157 (65.1 bits)