Os05g0593000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os05g0593000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 61.54 | 0.369 | 9.88 | 1.4 | 0.446 | -1.42 | 0.202 | 0.272 | 0.611 | 20.2 | 19.84 | 106 | -- | -- |
| 61.59 | 0.366 | 9.89 | 1.37 | 0.457 | -1.43 | 0.193 | -- | 0.6 | 20.1 | 19.61 | 115 | -- | -- |
| 61.62 | 0.366 | 9.88 | 1.39 | 0.466 | -1.41 | -- | 0.292 | 0.612 | 20.2 | 19.9 | 122 | -- | -- |
| 61.68 | 0.366 | 9.89 | 1.35 | 0.475 | -1.4 | -- | -- | 0.596 | 20.3 | 19.7 | 132 | -- | -- |
| 69.08 | 0.389 | 9.88 | 1.31 | -- | -1.42 | -- | -0.17 | 0.587 | -- | 18.7 | 40 | -- | -- |
| 91.85 | 0.449 | 9.94 | 1.04 | 0.579 | -- | 0.189 | -- | 0.359 | 0.187 | -- | -- | -- | -- |
| 92 | 0.449 | 9.94 | 1.03 | 0.578 | -- | -- | -- | 0.358 | 0.186 | -- | -- | -- | -- |
| 69.01 | 0.387 | 9.88 | 1.33 | -- | -1.4 | -- | -- | 0.591 | -- | 19.3 | 12 | -- | -- |
| 105.42 | 0.478 | 9.94 | -- | 0.461 | -0.914 | -- | -- | 0.375 | 21.9 | 20.6 | 139 | -- | -- |
| 113.04 | 0.497 | 9.93 | 1.05 | -- | -- | -- | -- | 0.367 | -- | -- | -- | -- | -- |
| 120.16 | 0.513 | 9.96 | -- | 0.593 | -- | -- | -- | 0.243 | 0.281 | -- | -- | -- | -- |
| 113.17 | 0.497 | 9.92 | -- | -- | -1.11 | -- | -- | 0.403 | -- | 20.2 | 5 | -- | -- |
| 142.26 | 0.557 | 9.95 | -- | -- | -- | -- | -- | 0.25 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 60.60 | temperature | 20 | 270 | > th | dose dependent | rect. | 19 | 23 |
| 3 | 60.79 | temperature | 20 | 90 | > th | dose dependent | rect. | 7 | 23 |
| 4 | 60.92 | temperature | 20 | 90 | > th | dose dependent | rect. | 23 | 23 |
| 6 | 61.02 | temperature | 30 | 270 | < th | dose dependent | rect. | 24 | 23 |
| 8 | 61.07 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 8 |
| 13 | 61.11 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 5 |
| 23 | 61.23 | temperature | 25 | 1440 | < th | dose independent | rect. | 19 | 3 |
| 30 | 61.28 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 23 |
| 39 | 61.46 | temperature | 25 | 1440 | > th | dose independent | rect. | 19 | 3 |
| 52 | 61.57 | temperature | 20 | 1440 | > th | dose dependent | sin | 13 | NA |
| 63 | 61.65 | temperature | 20 | 1440 | > th | dose dependent | rect. | 19 | 1 |
| 67 | 61.68 | temperature | 20 | 90 | > th | dose dependent | no | NA | NA |
| 74 | 61.72 | temperature | 25 | 1440 | > th | dose independent | rect. | 17 | 5 |
| 81 | 61.74 | temperature | 30 | 90 | < th | dose dependent | no | NA | NA |
| 87 | 61.77 | temperature | 25 | 1440 | > th | dose independent | rect. | 20 | 1 |
| 102 | 61.87 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 23 |
| 147 | 62.21 | temperature | 30 | 90 | < th | dose dependent | rect. | 13 | 23 |
| 164 | 62.32 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 175 | 62.38 | temperature | 20 | 270 | > th | dose dependent | rect. | 12 | 23 |
| 176 | 62.39 | temperature | 30 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 225 | 62.66 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 3 |
| 229 | 62.67 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 5 |
| 308 | 62.95 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 311 | 62.96 | temperature | 20 | 270 | > th | dose dependent | rect. | 10 | 23 |
| 318 | 62.98 | temperature | 20 | 90 | > th | dose dependent | rect. | 23 | 20 |
| 334 | 63.05 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 414 | 63.28 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 430 | 63.31 | temperature | 30 | 90 | < th | dose dependent | rect. | 5 | 18 |
| 455 | 63.39 | temperature | 20 | 1440 | > th | dose dependent | rect. | 23 | 23 |
| 462 | 63.40 | temperature | 20 | 1440 | > th | dose dependent | rect. | 2 | 23 |
| 517 | 63.53 | temperature | 30 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 662 | 63.88 | temperature | 10 | 720 | > th | dose dependent | rect. | 14 | 19 |
| 682 | 63.92 | temperature | 30 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 683 | 63.93 | temperature | 20 | 1440 | > th | dose dependent | rect. | 3 | 4 |
| 773 | 64.13 | temperature | 30 | 90 | < th | dose dependent | sin | 20 | NA |
| 849 | 64.30 | temperature | 30 | 10 | < th | dose dependent | sin | 19 | NA |