Os01g0582600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0582600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 119.8 | 0.514 | 7.09 | 1.28 | 1.84 | -2.27 | 0.675 | 32.1 | -0.271 | 8.78 | 32.71 | 212 | -- | -- |
| 130.53 | 0.536 | 7.21 | 0.316 | 1.74 | 1.4 | 0.515 | -- | -0.293 | 8.93 | 32.71 | 212 | -- | -- |
| 121.1 | 0.513 | 7.11 | 1.18 | 1.82 | -2.24 | -- | 32.5 | -0.28 | 8.76 | 32.94 | 194 | -- | -- |
| 124.94 | 0.521 | 7.21 | 0.322 | 1.82 | 1.81 | -- | -- | -0.275 | 8.78 | 33.12 | 137 | -- | -- |
| 303.05 | 0.815 | 7.23 | 0.555 | -- | -0.623 | -- | 16.2 | -0.28 | -- | 32.53 | 183 | -- | -- |
| 138.16 | 0.551 | 7.22 | 0.349 | 1.74 | -- | 0.544 | -- | -0.311 | 9.08 | -- | -- | -- | -- |
| 139.18 | 0.552 | 7.22 | 0.368 | 1.74 | -- | -- | -- | -0.311 | 9.05 | -- | -- | -- | -- |
| 290.33 | 0.794 | 7.25 | 0.544 | -- | -0.862 | -- | -- | -0.226 | -- | 24.32 | 697 | -- | -- |
| 127.36 | 0.526 | 7.22 | -- | 1.82 | 1.72 | -- | -- | -0.311 | 8.76 | 32.74 | 133 | -- | -- |
| 313.06 | 0.827 | 7.27 | 0.365 | -- | -- | -- | -- | -0.301 | -- | -- | -- | -- | -- |
| 142.75 | 0.559 | 7.23 | -- | 1.74 | -- | -- | -- | -0.352 | 9.03 | -- | -- | -- | -- |
| 298.07 | 0.804 | 7.26 | -- | -- | -0.794 | -- | -- | -0.277 | -- | 24.4 | 687 | -- | -- |
| 316.57 | 0.83 | 7.28 | -- | -- | -- | -- | -- | -0.341 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 119.53 | temperature | 30 | 4320 | < th | dose dependent | rect. | 9 | 1 |
| 2 | 119.54 | temperature | 10 | 4320 | > th | dose dependent | rect. | 9 | 1 |
| 6 | 119.59 | temperature | 30 | 10 | > th | dose dependent | sin | 12 | NA |
| 78 | 120.69 | temperature | 30 | 270 | < th | dose independent | rect. | 6 | 10 |
| 79 | 120.71 | temperature | 30 | 270 | > th | dose dependent | rect. | 12 | 4 |
| 84 | 120.74 | temperature | 30 | 10 | > th | dose dependent | rect. | 14 | 5 |
| 108 | 120.81 | temperature | 30 | 90 | > th | dose dependent | rect. | 13 | 22 |
| 132 | 121.01 | temperature | 30 | 270 | > th | dose dependent | rect. | 8 | 8 |
| 233 | 121.42 | temperature | 30 | 10 | < th | dose independent | rect. | 8 | 9 |
| 305 | 121.75 | temperature | 20 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 306 | 121.75 | temperature | 20 | 14400 | > th | dose independent | rect. | 22 | 3 |
| 311 | 121.77 | temperature | 20 | 14400 | < th | dose independent | rect. | 22 | 3 |
| 317 | 121.80 | temperature | 20 | 14400 | < th | dose independent | rect. | 15 | 14 |
| 325 | 121.82 | temperature | 20 | 14400 | < th | dose independent | sin | 13 | NA |
| 326 | 121.82 | temperature | 20 | 14400 | < th | dose independent | rect. | 17 | 12 |
| 330 | 121.82 | temperature | 20 | 14400 | > th | dose independent | rect. | 14 | 17 |
| 335 | 121.83 | temperature | 20 | 14400 | > th | dose independent | rect. | 14 | 15 |
| 359 | 121.84 | temperature | 20 | 14400 | < th | dose independent | rect. | 21 | 6 |
| 373 | 121.86 | temperature | 20 | 14400 | > th | dose independent | sin | 13 | NA |
| 491 | 122.00 | temperature | 10 | 4320 | > th | dose dependent | sin | 2 | NA |
| 630 | 122.13 | temperature | 30 | 270 | > th | dose dependent | sin | 2 | NA |
| 679 | 122.18 | temperature | 30 | 10 | < th | dose independent | rect. | 8 | 21 |
| 793 | 122.28 | temperature | 20 | 14400 | > th | dose independent | no | NA | NA |
| 822 | 122.31 | temperature | 20 | 14400 | > th | dose independent | rect. | 3 | 23 |
| 825 | 122.31 | wind | 3 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 837 | 122.33 | wind | 3 | 43200 | > th | dose dependent | rect. | 6 | 4 |
| 848 | 122.35 | temperature | 20 | 14400 | < th | dose independent | no | NA | NA |
| 853 | 122.35 | temperature | 20 | 14400 | > th | dose independent | rect. | 23 | 23 |
| 881 | 122.39 | temperature | 30 | 270 | < th | dose independent | rect. | 22 | 17 |
| 885 | 122.39 | temperature | 20 | 14400 | < th | dose independent | rect. | 4 | 23 |
| 897 | 122.40 | temperature | 20 | 14400 | < th | dose independent | rect. | 23 | 23 |
| 904 | 122.41 | temperature | 30 | 10 | < th | dose independent | rect. | 12 | 16 |
| 957 | 122.48 | radiation | 20 | 90 | < th | dose dependent | rect. | 7 | 9 |
| 988 | 122.54 | temperature | 20 | 43200 | > th | dose independent | rect. | 19 | 1 |