BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0582600 Os01g0582600|J023150F24
(500 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G12010.1 | chr5:3877975-3879483 REVERSE LENGTH=503 454 e-128
AT4G29780.1 | chr4:14579859-14581481 FORWARD LENGTH=541 410 e-114
AT3G63270.1 | chr3:23375932-23377398 REVERSE LENGTH=397 116 3e-26
AT3G55350.1 | chr3:20518518-20520690 FORWARD LENGTH=407 114 2e-25
AT3G19120.1 | chr3:6609678-6611018 REVERSE LENGTH=447 64 2e-10
AT1G72270.1 | chr1:27199733-27211122 REVERSE LENGTH=2846 56 4e-08
>AT5G12010.1 | chr5:3877975-3879483 REVERSE LENGTH=503
Length = 502
Score = 454 bits (1169), Expect = e-128, Method: Compositional matrix adjust.
Identities = 229/466 (49%), Positives = 278/466 (59%), Gaps = 56/466 (12%)
Query: 87 RSIAKILTSLAALEAEEHXXXXXXXXXXXXELALLESNADHKSQAMMDYYAKMEGSFDAA 146
+++ TSL +E E E++ +SN +++ M DYY+ + + A
Sbjct: 41 KNLKGFFTSLLLMEEHEKQDQEARNAASRREMSDFQSNYRKRARTMSDYYSDLNDYYADA 100
Query: 147 AESDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHHQRRLWVKD 206
ES QRRLWVKD
Sbjct: 101 EESGDINLKKSRVSRAVASVAVAAASEIEAESSEITGSGSVRGTGSG----QQRRLWVKD 156
Query: 207 RSRAWWDKCNSPDYPEEEFRRAFRMGRETFDMICEALGSAVAKEDTMLRAAIPVRQRVAV 266
RSRAWW++C+ DYPEE+F++AFRM + TF++IC+ L SAVAKEDT LR AIPVRQRVAV
Sbjct: 157 RSRAWWEECSRLDYPEEDFKKAFRMSKSTFELICDELNSAVAKEDTALRNAIPVRQRVAV 216
Query: 267 CIWRLATGEPLRLVSKRFGLGISTCHKLVLEVCAAIKSVLMPRFLQWPDXXXXXXXXXXX 326
CIWRLATGEPLRLVSK+FGLGISTCHKLVLEVC AIK VLMP++LQWPD
Sbjct: 217 CIWRLATGEPLRLVSKKFGLGISTCHKLVLEVCKAIKDVLMPKYLQWPDDESLRNIRERF 276
Query: 327 XXXYGVPGVIGAMYTTHIPIIAPKISVAAYFNRRHTERNQKTSYSITLQGVVGPDGAFTD 386
G+P V+G+MYTTHIPIIAPKISVA+YFN+RHTERNQKTSYSIT+Q VV P G FTD
Sbjct: 277 ESVSGIPNVVGSMYTTHIPIIAPKISVASYFNKRHTERNQKTSYSITIQAVVNPKGVFTD 336
Query: 387 VCIGWPGSMPDDQVLEKSMLHQRA-AAGMMHSACLVGGASYPLMDWVLVPYTHQNLTWTQ 445
+CIGWPGSMPDD+VLEKS+L+QRA G++ + GG +PL+DWVLVPYT QNLTWTQ
Sbjct: 337 LCIGWPGSMPDDKVLEKSLLYQRANNGGLLKGMWVAGGPGHPLLDWVLVPYTQQNLTWTQ 396
Query: 446 HAFNEKVGDLRRVAVDAFARLKARWAC--------------------------------- 472
HAFNEK+ +++ VA +AF RLK RWAC
Sbjct: 397 HAFNEKMSEVQGVAKEAFGRLKGRWACLQKRTEVKLQDLPTVLGACCVLHNICEMREEKM 456
Query: 473 ------------------LRSEAAKRARDNIAHNLLHRGFAGTTFF 500
LRS A +ARD I+HNLLH G AGT+F
Sbjct: 457 EPELMVEVIDDEVLPENVLRSVNAMKARDTISHNLLHHGLAGTSFL 502
>AT4G29780.1 | chr4:14579859-14581481 FORWARD LENGTH=541
Length = 540
Score = 410 bits (1053), Expect = e-114, Method: Compositional matrix adjust.
Identities = 211/464 (45%), Positives = 264/464 (56%), Gaps = 54/464 (11%)
Query: 86 KRSIAKILTSLAALEAEEHXXXXXXXXXXXXELALLESNADHKSQAMMDYYAKMEGSFDA 145
K + IL +L L+ E E +LLE+N K + M YY +M+ + A
Sbjct: 76 KAAFGDILATLLLLDEEAKQQQEQWDFEFIKEKSLLEANHKKKVKTMDGYYNQMQDHYSA 135
Query: 146 AAESDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHHQRRLWVK 205
A E+D H RRLWVK
Sbjct: 136 AGETDGSRSKRARKTAVAAVVSAVASGADTTGLAAPVPTADIASGSGSGPSH--RRLWVK 193
Query: 206 DRSRAWWDKCNSPDYPEEEFRRAFRMGRETFDMICEALGSAVAKEDTMLRAAIPVRQRVA 265
+R+ WWD+ + PD+PE+EFRR FRM + TF++ICE L + V K++TMLR AIP +RV
Sbjct: 194 ERTTDWWDRVSRPDFPEDEFRREFRMSKSTFNLICEELDTTVTKKNTMLRDAIPAPKRVG 253
Query: 266 VCIWRLATGEPLRLVSKRFGLGISTCHKLVLEVCAAIKSVLMPRFLQWPDXXXXXXXXXX 325
VC+WRLATG PLR VS+RFGLGISTCHKLV+EVC AI VLMP++L WP
Sbjct: 254 VCVWRLATGAPLRHVSERFGLGISTCHKLVIEVCRAIYDVLMPKYLLWPSDSEINSTKAK 313
Query: 326 XXXXYGVPGVIGAMYTTHIPIIAPKISVAAYFNRRHTERNQKTSYSITLQGVVGPDGAFT 385
+ +P V+G++YTTHIPIIAPK+ VAAYFN+RHTERNQKTSYSIT+QGVV DG FT
Sbjct: 314 FESVHKIPNVVGSIYTTHIPIIAPKVHVAAYFNKRHTERNQKTSYSITVQGVVNADGIFT 373
Query: 386 DVCIGWPGSMPDDQVLEKSML-HQRAAAGMMHSACLVGGASYPLMDWVLVPYTHQNLTWT 444
DVCIG PGS+ DDQ+LEKS L QRAA GM+ + +VG + +PL D++LVPYT QNLTWT
Sbjct: 374 DVCIGNPGSLTDDQILEKSSLSRQRAARGMLRDSWIVGNSGFPLTDYLLVPYTRQNLTWT 433
Query: 445 QHAFNEKVGDLRRVAVDAFARLKARWACL------------------------------- 473
QHAFNE +G+++ +A AF RLK RWACL
Sbjct: 434 QHAFNESIGEIQGIATAAFERLKGRWACLQKRTEVKLQDLPYVLGACCVLHNICEMRKEE 493
Query: 474 --------------------RSEAAKRARDNIAHNLLHRGFAGT 497
RS +A RD+I+HNLLHRG AGT
Sbjct: 494 MLPELKFEVFDDVAVPENNIRSASAVNTRDHISHNLLHRGLAGT 537
>AT3G63270.1 | chr3:23375932-23377398 REVERSE LENGTH=397
Length = 396
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 134/293 (45%), Gaps = 42/293 (14%)
Query: 211 WWD----KCNSPDYPEEE---FRRAFRMGRETFDMICEALGSAVAKEDTMLRAA------ 257
WWD + +SP P +E F+ FR + TF IC ++ +ED + R
Sbjct: 44 WWDTFWLRNSSPSVPSDEDYAFKHFFRASKTTFSYIC-----SLVREDLISRPPSGLINI 98
Query: 258 ----IPVRQRVAVCIWRLATGEPLRLVSKRFGLGISTCHKLVLEVCAAIKSVLMPRFLQW 313
+ V ++VA+ + RLA+G+ V FG+G ST ++ A++ L+W
Sbjct: 99 EGRLLSVEKQVAIALRRLASGDSQVSVGAAFGVGQSTVSQVTWRFIEALEE-RAKHHLRW 157
Query: 314 PDXXXXXXXXXXXXXXYGVPGVIGAMYTTHIPIIAPKISVAAYFNRRHTERNQKTSYSIT 373
PD YG+P GA+ TTHI + P + + + +Q+ +YS+
Sbjct: 158 PDSDRIEEIKSKFEEMYGLPNCCGAIDTTHIIMTLPAVQASDDWC------DQEKNYSMF 211
Query: 374 LQGVVGPDGAFTDVCIGWPGSMPDDQVLEKSMLHQRA-------------AAGMMHSACL 420
LQGV + F ++ GWPG M ++L+ S + + G +
Sbjct: 212 LQGVFDHEMRFLNMVTGWPGGMTVSKLLKFSGFFKLCENAQILDGNPKTLSQGAQIREYV 271
Query: 421 VGGASYPLMDWVLVPYTHQNLTWTQHAFNEKVGDLRRVAVDAFARLKARWACL 473
VGG SYPL+ W++ P+ + + + AFNE+ +R VA AF +LK W L
Sbjct: 272 VGGISYPLLPWLITPHDSDHPSDSMVAFNERHEKVRSVAATAFQQLKGSWRIL 324
>AT3G55350.1 | chr3:20518518-20520690 FORWARD LENGTH=407
Length = 406
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 128/285 (44%), Gaps = 29/285 (10%)
Query: 207 RSRAWWDKCNSPDY----PEEEFRRAFRMGRETFDMICEALGSAVAKEDTMLRAA----I 258
+S WWD + Y + F F++ R+TFD IC + + + + +
Sbjct: 50 QSLDWWDGFSRRIYGGSTDPKTFESVFKISRKTFDYICSLVKADFTAKPANFSDSNGNPL 109
Query: 259 PVRQRVAVCIWRLATGEPLRLVSKRFGLGISTCHKLVLEVCAAIKSVLMPRFLQWPDXXX 318
+ RVAV + RL +GE L ++ + FG+ ST ++ +++ + L WP
Sbjct: 110 SLNDRVAVALRRLGSGESLSVIGETFGMNQSTVSQITWRFVESMEERAI-HHLSWPSKLD 168
Query: 319 XXXXXXXXXXXYGVPGVIGAMYTTHIPIIAPKISVAAYFNRRHTERNQKTSYSITLQGVV 378
G+P GA+ THI + P + + + + ++S+TLQ VV
Sbjct: 169 EIKSKFEKIS--GLPNCCGAIDITHIVMNLPAVEPS-----NKVWLDGEKNFSMTLQAVV 221
Query: 379 GPDGAFTDVCIGWPGSMPDDQVLEKSMLHQRAAAGMMHSA-------------CLVGGAS 425
PD F DV GWPGS+ DD VL+ S ++ G + +VG +
Sbjct: 222 DPDMRFLDVIAGWPGSLNDDVVLKNSGFYKLVEKGKRLNGEKLPLSERTELREYIVGDSG 281
Query: 426 YPLMDWVLVPYTHQNLTWTQHAFNEKVGDLRRVAVDAFARLKARW 470
+PL+ W+L PY + + Q FN++ + + A A ++LK RW
Sbjct: 282 FPLLPWLLTPYQGKPTSLPQTEFNKRHSEATKAAQMALSKLKDRW 326
>AT3G19120.1 | chr3:6609678-6611018 REVERSE LENGTH=447
Length = 446
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 113/275 (41%), Gaps = 37/275 (13%)
Query: 222 EEEFRRAFRMGRETFDMICEALGSAVAKEDTMLRAAIPVRQRVAVCIWRLATGEPLRLVS 281
+ +R + + F + + L + + ++P VA+ + RLA G + ++
Sbjct: 114 DARWRSLYGLSYPVFITVVDKLKPFITASNL----SLPADYAVAMVLSRLAHGCSAKTLA 169
Query: 282 KRFGLGISTCHKLVLEVCAAIKSVLMPRFLQWP-DXXXXXXXXXXXXXXYGVPGVIGAMY 340
R+ L K+ V + + L P F++ P +P + GA+
Sbjct: 170 SRYSLDPYLISKITNMVTRLLATKLYPEFIKIPVGKRRLIETTQGFEELTSLPNICGAID 229
Query: 341 TTHIPIIAPKISVAAYFNRRHTERNQKTSY-------SITLQGVVGPDGAFTDVCIGWPG 393
+T + + RR T+ N + Y ++ LQ V F DVC+ PG
Sbjct: 230 STPVKL------------RRRTKLNPRNIYGCKYGYDAVLLQVVADHKKIFWDVCVKAPG 277
Query: 394 SMPDDQVLEKSMLHQRAAAGMM----------HSA--CLVGGASYPLMDWVLVPYT-HQN 440
D S+L++R +G + H +VG YPL+ +++ P++ + +
Sbjct: 278 GEDDSSHFRDSLLYKRLTSGDIVWEKVINIRGHHVRPYIVGDWCYPLLSFLMTPFSPNGS 337
Query: 441 LTWTQHAFNEKVGDLRRVAVDAFARLKARWACLRS 475
T ++ F+ + R V V+A LKARW L+S
Sbjct: 338 GTPPENLFDGMLMKGRSVVVEAIGLLKARWKILQS 372
>AT1G72270.1 | chr1:27199733-27211122 REVERSE LENGTH=2846
Length = 2845
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 58/118 (49%), Gaps = 18/118 (15%)
Query: 371 SITLQGVVGPDGAFTDVCIGWPGSMPDDQVLEKSMLHQ-----------RAAAGMMHSAC 419
SI +Q +V +G F D+ GWP +M + + ++ L + G++
Sbjct: 206 SILVQALVDSNGRFVDISAGWPSTMKPEAIFRQTKLFSIAEEVLSGAPTKLGNGVLVPRY 265
Query: 420 LVGGASYPLMDWVLVPYTHQNLTWTQHAFNEKVGDLRRVAVD----AFARLKARWACL 473
++G + PL+ W++ PY +LT + +F E+ ++ + AFA+++ARW L
Sbjct: 266 ILGDSCLPLLPWLVTPY---DLTSDEESFREEFNNVVHTGLHSVEIAFAKVRARWRIL 320
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.323 0.133 0.417
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,273,993
Number of extensions: 257325
Number of successful extensions: 635
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 620
Number of HSP's successfully gapped: 6
Length of query: 500
Length of database: 11,106,569
Length adjustment: 103
Effective length of query: 397
Effective length of database: 8,282,721
Effective search space: 3288240237
Effective search space used: 3288240237
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 114 (48.5 bits)