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Os07g0175100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Homeodomain-like containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.81 (0.013) R2 : 0.102
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.196 (0.0273) R2dN8 : 0.131 R2N8 : 0.102
σ : 0.244
deviance : 27.36
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
15.93 0.188 9.88 -0.608 0.426 -1.54 -0.0766 7.81 -0.205 8 999.8 290 -- --
16.87 0.193 9.8 -0.135 0.423 -0.108 -0.0932 -- -0.208 7.92 999.8 290 -- --
15.94 0.186 9.88 -0.616 0.426 -1.56 -- 7.93 -0.205 8.03 999.7 300 -- --
16.69 0.192 9.8 -0.132 0.423 -0.221 -- -- -0.209 7.98 996.8 94 -- --
25.68 0.236 9.88 -0.543 -- -1.67 -- 8.53 -0.202 -- 998.7 211 -- --
17.18 0.194 9.8 -0.117 0.424 -- -0.086 -- -0.215 7.95 -- -- -- --
17.2 0.194 9.8 -0.119 0.424 -- -- -- -0.214 7.99 -- -- -- --
26.32 0.239 9.81 -0.117 -- -0.314 -- -- -0.206 -- 996.6 1170 -- --
17.12 0.193 9.8 -- 0.417 -0.271 -- -- -0.195 8.07 996.6 1021 -- --
27.02 0.243 9.81 -0.114 -- -- -- -- -0.209 -- -- -- -- --
17.58 0.196 9.8 -- 0.423 -- -- -- -0.201 8.01 -- -- -- --
26.72 0.241 9.81 -- -- -0.37 -- -- -0.19 -- 996.6 1209 -- --
27.36 0.244 9.81 -- -- -- -- -- -0.196 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 14.60 atmosphere 1005.0 270 > th dose independent rect. 15 13
6 14.82 atmosphere 1005.0 270 > th dose independent rect. 23 4
9 14.88 atmosphere 1000.0 270 > th dose independent rect. 22 6
15 14.93 atmosphere 1005.0 10 > th dose independent rect. 24 6
17 14.94 atmosphere 1000.0 270 > th dose independent rect. 23 13
22 14.97 atmosphere 1000.0 270 > th dose independent rect. 6 23
24 14.99 atmosphere 1000.0 270 > th dose independent rect. 7 21
26 15.02 atmosphere 1005.0 270 > th dose independent rect. 24 2
36 15.09 temperature 15.0 270 > th dose dependent rect. 4 4
37 15.09 atmosphere 995.0 270 > th dose dependent rect. 23 4
38 15.10 temperature 10.0 1440 > th dose independent rect. 6 6
41 15.10 atmosphere 995.0 1440 > th dose independent rect. 6 6
44 15.10 temperature 10.0 1440 > th dose independent rect. 12 18
50 15.13 temperature 30.0 270 < th dose independent rect. 7 21
52 15.15 wind 1.0 90 > th dose independent rect. 4 5
62 15.19 wind 9.0 1440 < th dose independent rect. 1 5
63 15.19 wind 1.0 30 > th dose independent rect. 4 7
64 15.19 temperature 25.0 30 > th dose independent rect. 1 10
66 15.19 atmosphere 1000.0 270 > th dose dependent rect. 24 2
67 15.19 atmosphere 995.0 270 > th dose dependent rect. 22 6
74 15.21 temperature 25.0 30 > th dose independent rect. 3 8
84 15.23 atmosphere 1005.0 270 > th dose independent sin 14 NA
85 15.23 temperature 30.0 720 < th dose independent rect. 24 10
91 15.23 atmosphere 995.0 10 > th dose dependent rect. 24 6
95 15.25 temperature 10.0 1440 > th dose independent rect. 6 4
98 15.25 atmosphere 995.0 1440 > th dose independent rect. 6 4
99 15.25 atmosphere 1015.0 1440 < th dose independent rect. 6 4
100 15.25 temperature 10.0 1440 > th dose independent rect. 1 5
103 15.25 temperature 30.0 1440 < th dose independent rect. 1 5
107 15.25 humidity 50.0 1440 > th dose independent rect. 1 5
116 15.25 atmosphere 995.0 1440 > th dose independent rect. 1 5
117 15.25 radiation 20.0 1440 < th dose independent rect. 1 5
131 15.25 temperature 10.0 1440 > th dose independent rect. 6 19
135 15.25 temperature 10.0 1440 > th dose independent rect. 10 20
150 15.28 humidity 80.0 270 > th dose independent rect. 4 3
163 15.30 temperature 30.0 270 < th dose independent rect. 8 10
167 15.31 wind 1.0 270 > th dose independent rect. 4 3
177 15.32 radiation 30.0 270 < th dose independent rect. 18 14
188 15.33 humidity 50.0 270 > th dose independent rect. 7 21
199 15.35 radiation 20.0 270 < th dose independent rect. 4 3
220 15.37 atmosphere 1015.0 1440 < th dose independent rect. 1 5
226 15.38 humidity 50.0 4320 > th dose independent rect. 6 4
235 15.39 temperature 30.0 720 < th dose independent rect. 9 1
240 15.39 precipitation 0.1 270 < th dose independent rect. 18 14
246 15.39 precipitation 0.1 270 < th dose dependent rect. 18 14
247 15.40 wind 7.0 270 < th dose independent rect. 4 3
249 15.40 temperature 10.0 270 > th dose independent rect. 4 3
251 15.40 temperature 30.0 270 < th dose independent rect. 4 3
252 15.40 humidity 50.0 270 > th dose independent rect. 4 3
254 15.40 atmosphere 995.0 270 > th dose independent rect. 4 3
255 15.40 atmosphere 1015.0 270 < th dose independent rect. 4 3
258 15.40 precipitation 0.1 270 < th dose independent rect. 4 3
266 15.40 temperature 10.0 270 > th dose independent rect. 7 21
267 15.40 precipitation 0.1 270 < th dose dependent rect. 4 3
271 15.41 atmosphere 1005.0 10 > th dose independent rect. 22 8
273 15.41 atmosphere 1005.0 10 > th dose independent rect. 20 10
276 15.41 atmosphere 1015.0 90 < th dose independent rect. 9 20
281 15.42 atmosphere 1010.0 270 < th dose independent rect. 22 5
296 15.43 atmosphere 1005.0 720 > th dose independent rect. 16 5
298 15.43 humidity 60.0 90 > th dose independent rect. 5 6
311 15.43 temperature 15.0 30 > th dose dependent rect. 4 7
312 15.44 atmosphere 1005.0 720 > th dose independent rect. 18 1
316 15.44 temperature 30.0 720 < th dose independent rect. 7 5
323 15.44 humidity 50.0 270 > th dose dependent rect. 4 3
324 15.44 radiation 40.0 270 < th dose dependent rect. 4 3
332 15.45 wind 9.0 270 < th dose independent rect. 18 14
333 15.45 atmosphere 1015.0 270 < th dose independent rect. 7 21
334 15.45 temperature 10.0 270 > th dose dependent rect. 22 5
337 15.46 humidity 90.0 10 < th dose independent rect. 4 5
339 15.46 temperature 10.0 270 > th dose independent rect. 8 10
340 15.46 atmosphere 1015.0 270 < th dose independent rect. 8 10
344 15.46 temperature 10.0 270 > th dose independent rect. 18 14
345 15.46 humidity 50.0 270 > th dose independent rect. 18 14
346 15.46 atmosphere 1005.0 270 < th dose independent rect. 15 16
347 15.46 humidity 50.0 270 > th dose independent rect. 8 19
349 15.46 precipitation 0.1 270 < th dose independent rect. 7 21
354 15.46 precipitation 0.1 270 < th dose dependent rect. 7 21
361 15.47 radiation 40.0 90 < th dose independent rect. 5 6
362 15.47 humidity 70.0 90 > th dose independent rect. 17 12
384 15.48 wind 9.0 270 < th dose independent rect. 12 11
385 15.48 atmosphere 995.0 270 > th dose independent rect. 18 14
387 15.48 temperature 10.0 90 > th dose independent rect. 9 20
388 15.48 radiation 10.0 270 < th dose dependent rect. 5 1
409 15.50 atmosphere 1000.0 90 > th dose independent sin 4 NA
412 15.50 temperature 25.0 10 > th dose independent rect. 6 5
420 15.50 wind 1.0 10 > th dose independent rect. 19 16
431 15.51 humidity 90.0 10 < th dose independent rect. 4 7
433 15.51 humidity 50.0 270 > th dose independent rect. 8 10
443 15.51 wind 9.0 270 < th dose dependent rect. 5 2
458 15.52 precipitation 0.1 270 < th dose independent rect. 8 10
473 15.52 precipitation 0.1 270 < th dose dependent rect. 8 10
503 15.53 radiation 30.0 10 < th dose independent rect. 6 5
511 15.53 precipitation 0.1 270 < th dose independent rect. 3 19
512 15.53 wind 1.0 270 > th dose independent rect. 8 20
522 15.53 precipitation 0.1 270 < th dose dependent rect. 3 19
560 15.54 wind 9.0 270 < th dose dependent rect. 23 4
582 15.55 temperature 30.0 270 < th dose independent rect. 19 13
588 15.55 radiation 40.0 10 < th dose independent rect. 19 16
592 15.55 radiation 40.0 90 < th dose independent rect. 5 19
605 15.56 wind 3.0 270 < th dose independent rect. 23 4
610 15.56 atmosphere 995.0 270 > th dose independent rect. 8 10
614 15.56 atmosphere 1015.0 30 < th dose independent rect. 11 18
616 15.56 wind 9.0 270 < th dose independent rect. 3 20
641 15.57 wind 1.0 90 > th dose independent rect. 9 10
647 15.57 atmosphere 1015.0 270 < th dose independent rect. 23 13
656 15.57 precipitation 0.1 270 < th dose independent rect. 8 19
657 15.57 atmosphere 1000.0 10 > th dose independent rect. 9 21
663 15.57 temperature 10.0 270 > th dose dependent rect. 4 18
664 15.57 precipitation 0.1 270 < th dose dependent rect. 8 19
669 15.58 humidity 70.0 720 > th dose independent rect. 19 5
675 15.58 temperature 30.0 270 < th dose independent rect. 15 13
707 15.59 precipitation 0.1 270 < th dose independent rect. 12 11
709 15.59 wind 1.0 30 > th dose independent rect. 19 14
713 15.59 wind 7.0 30 < th dose independent rect. 19 16
727 15.59 precipitation 0.1 270 < th dose dependent rect. 12 11
728 15.59 atmosphere 995.0 90 > th dose dependent rect. 17 12
742 15.60 temperature 30.0 720 < th dose independent rect. 22 14
776 15.61 temperature 15.0 270 > th dose independent rect. 22 5
798 15.61 wind 1.0 10 > th dose independent rect. 21 14
802 15.61 temperature 15.0 30 > th dose independent rect. 11 18
825 15.62 radiation 40.0 10 < th dose independent rect. 21 14
827 15.62 precipitation 0.1 30 < th dose independent rect. 19 16
836 15.62 atmosphere 995.0 270 > th dose dependent rect. 4 3
841 15.62 radiation 40.0 270 < th dose dependent rect. 18 14
842 15.62 precipitation 0.1 30 < th dose dependent rect. 19 16
843 15.62 temperature 10.0 10 > th dose dependent rect. 6 18
861 15.63 temperature 10.0 270 > th dose independent rect. 12 11
864 15.63 temperature 10.0 270 > th dose independent rect. 23 13
876 15.63 temperature 15.0 10 > th dose dependent rect. 6 3
889 15.64 wind 3.0 270 < th dose independent rect. 24 2
904 15.64 humidity 90.0 10 < th dose independent rect. 2 9
913 15.64 humidity 60.0 30 > th dose independent rect. 19 16
919 15.64 wind 7.0 270 < th dose dependent rect. 24 2
923 15.64 atmosphere 1015.0 90 < th dose dependent rect. 5 4
932 15.65 temperature 30.0 270 < th dose independent rect. 23 4
933 15.65 humidity 50.0 270 > th dose independent rect. 23 4
938 15.65 radiation 1.0 270 < th dose independent rect. 23 4
943 15.65 precipitation 0.1 270 < th dose independent rect. 23 4
949 15.65 temperature 10.0 30 > th dose independent rect. 5 6
952 15.65 atmosphere 995.0 30 > th dose independent rect. 5 6
953 15.65 atmosphere 1015.0 30 < th dose independent rect. 5 6
954 15.65 precipitation 0.1 30 < th dose independent rect. 5 6
955 15.65 humidity 90.0 10 < th dose independent rect. 2 7
961 15.65 humidity 50.0 270 > th dose independent rect. 23 13
962 15.65 radiation 1.0 270 > th dose independent rect. 18 13
972 15.65 temperature 10.0 270 > th dose independent rect. 3 20
973 15.65 temperature 25.0 4320 > th dose dependent rect. 24 1
977 15.65 temperature 25.0 4320 > th dose dependent rect. 24 3
979 15.65 humidity 50.0 270 > th dose dependent rect. 23 4
981 15.65 radiation 1.0 270 < th dose dependent rect. 23 4
986 15.65 precipitation 0.1 270 < th dose dependent rect. 23 4
992 15.65 humidity 50.0 90 > th dose dependent rect. 5 6
993 15.65 precipitation 0.1 30 < th dose dependent rect. 5 6
997 15.66 temperature 25.0 10 > th dose independent rect. 6 3
1000 15.66 atmosphere 995.0 4320 > th dose independent rect. 3 3