BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0175100 Os07g0175100|AK064387
(436 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G63270.1 | chr3:23375932-23377398 REVERSE LENGTH=397 473 e-133
AT3G55350.1 | chr3:20518518-20520690 FORWARD LENGTH=407 352 3e-97
AT5G12010.1 | chr5:3877975-3879483 REVERSE LENGTH=503 128 7e-30
AT4G29780.1 | chr4:14579859-14581481 FORWARD LENGTH=541 114 9e-26
AT3G19120.1 | chr3:6609678-6611018 REVERSE LENGTH=447 94 2e-19
AT1G72270.1 | chr1:27199733-27211122 REVERSE LENGTH=2846 85 7e-17
>AT3G63270.1 | chr3:23375932-23377398 REVERSE LENGTH=397
Length = 396
Score = 473 bits (1216), Expect = e-133, Method: Compositional matrix adjust.
Identities = 230/368 (62%), Positives = 276/368 (75%), Gaps = 4/368 (1%)
Query: 67 GAPPLPPELRGLDTEWWYTFLHKHSELGLSAPSDEGEAXXXXXXXXXXXXDYICSIVRED 126
A PL PE +D +WW TF ++S S PSDE A YICS+VRED
Sbjct: 31 NAVPLDPE--AIDCDWWDTFWLRNS--SPSVPSDEDYAFKHFFRASKTTFSYICSLVRED 86
Query: 127 LISRPPSGLINIEGRLLSVEKQVAIAMRRLASGDSQVSVGAAFGVGQSTVSQVTWRFIES 186
LISRPPSGLINIEGRLLSVEKQVAIA+RRLASGDSQVSVGAAFGVGQSTVSQVTWRFIE+
Sbjct: 87 LISRPPSGLINIEGRLLSVEKQVAIALRRLASGDSQVSVGAAFGVGQSTVSQVTWRFIEA 146
Query: 187 MEERARHHLVWPGQERMEQIKARFEAESGLPNCCGAIDATHIIMTLPAVESSEDWCDPAK 246
+EERA+HHL WP +R+E+IK++FE GLPNCCGAID THIIMTLPAV++S+DWCD K
Sbjct: 147 LEERAKHHLRWPDSDRIEEIKSKFEEMYGLPNCCGAIDTTHIIMTLPAVQASDDWCDQEK 206
Query: 247 NYSMFLQGIVDDEMRFIDIVTGWPGSMMFSRLLKCSGFFKHCDAGTRLDGPVMVSAENGE 306
NYSMFLQG+ D EMRF+++VTGWPG M S+LLK SGFFK C+ LDG ++ +
Sbjct: 207 NYSMFLQGVFDHEMRFLNMVTGWPGGMTVSKLLKFSGFFKLCENAQILDGNPKTLSQGAQ 266
Query: 307 IREYIVGNNCYPLLPWLMTPYEGESLSAPMASFNARQKAARTLGPRALSRLKGSWRILNK 366
IREY+VG YPLLPWL+TP++ + S M +FN R + R++ A +LKGSWRIL+K
Sbjct: 267 IREYVVGGISYPLLPWLITPHDSDHPSDSMVAFNERHEKVRSVAATAFQQLKGSWRILSK 326
Query: 367 VMWRPDKNKLPSIILVCCLLHNIIIDCEDELLPDVQLPDHHDTGYSEEKCEQVDPNGKIM 426
VMWRPD+ KLPSIILVCCLLHNIIIDC D L DV L HHD+GY++ C+Q +P G +
Sbjct: 327 VMWRPDRRKLPSIILVCCLLHNIIIDCGDYLQEDVPLSGHHDSGYADRYCKQTEPLGSEL 386
Query: 427 RDVITGYL 434
R +T +L
Sbjct: 387 RGCLTEHL 394
>AT3G55350.1 | chr3:20518518-20520690 FORWARD LENGTH=407
Length = 406
Score = 352 bits (902), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 166/319 (52%), Positives = 221/319 (69%), Gaps = 4/319 (1%)
Query: 117 DYICSIVREDLISRPPSGLINIEGRLLSVEKQVAIAMRRLASGDSQVSVGAAFGVGQSTV 176
DYICS+V+ D ++P + + G LS+ +VA+A+RRL SG+S +G FG+ QSTV
Sbjct: 84 DYICSLVKADFTAKP-ANFSDSNGNPLSLNDRVAVALRRLGSGESLSVIGETFGMNQSTV 142
Query: 177 SQVTWRFIESMEERARHHLVWPGQERMEQIKARFEAESGLPNCCGAIDATHIIMTLPAVE 236
SQ+TWRF+ESMEERA HHL WP ++++IK++FE SGLPNCCGAID THI+M LPAVE
Sbjct: 143 SQITWRFVESMEERAIHHLSWPS--KLDEIKSKFEKISGLPNCCGAIDITHIVMNLPAVE 200
Query: 237 -SSEDWCDPAKNYSMFLQGIVDDEMRFIDIVTGWPGSMMFSRLLKCSGFFKHCDAGTRLD 295
S++ W D KN+SM LQ +VD +MRF+D++ GWPGS+ +LK SGF+K + G RL+
Sbjct: 201 PSNKVWLDGEKNFSMTLQAVVDPDMRFLDVIAGWPGSLNDDVVLKNSGFYKLVEKGKRLN 260
Query: 296 GPVMVSAENGEIREYIVGNNCYPLLPWLMTPYEGESLSAPMASFNARQKAARTLGPRALS 355
G + +E E+REYIVG++ +PLLPWL+TPY+G+ S P FN R A ALS
Sbjct: 261 GEKLPLSERTELREYIVGDSGFPLLPWLLTPYQGKPTSLPQTEFNKRHSEATKAAQMALS 320
Query: 356 RLKGSWRILNKVMWRPDKNKLPSIILVCCLLHNIIIDCEDELLPDVQLPDHHDTGYSEEK 415
+LK WRI+N VMW PD+N+LP II VCCLLHNIIID ED+ L D L HD Y +
Sbjct: 321 KLKDRWRIINGVMWMPDRNRLPRIIFVCCLLHNIIIDMEDQTLDDQPLSQQHDMNYRQRS 380
Query: 416 CEQVDPNGKIMRDVITGYL 434
C+ D ++RD ++ L
Sbjct: 381 CKLADEASSVLRDELSDQL 399
>AT5G12010.1 | chr5:3877975-3879483 REVERSE LENGTH=503
Length = 502
Score = 128 bits (321), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 145/297 (48%), Gaps = 22/297 (7%)
Query: 145 VEKQVAIAMRRLASGDSQVSVGAAFGVGQSTVSQVTWRFIESMEERAR-HHLVWPGQERM 203
V ++VA+ + RLA+G+ V FG+G ST ++ +++++ +L WP E +
Sbjct: 210 VRQRVAVCIWRLATGEPLRLVSKKFGLGISTCHKLVLEVCKAIKDVLMPKYLQWPDDESL 269
Query: 204 EQIKARFEAESGLPNCCGAIDATHIIMTLPAVESSEDWC------DPAKNYSMFLQGIVD 257
I+ RFE+ SG+PN G++ THI + P + + + + +YS+ +Q +V+
Sbjct: 270 RNIRERFESVSGIPNVVGSMYTTHIPIIAPKISVASYFNKRHTERNQKTSYSITIQAVVN 329
Query: 258 DEMRFIDIVTGWPGSMMFSRLLKCSGFFKHCDAGTRLDGPVMVSAENGEIREYIVGNNCY 317
+ F D+ GWPGSM ++L+ S ++ + G L G ++ G +
Sbjct: 330 PKGVFTDLCIGWPGSMPDDKVLEKSLLYQRANNGGLLKGM------------WVAGGPGH 377
Query: 318 PLLPWLMTPYEGESLSAPMASFNARQKAARTLGPRALSRLKGSWRILNKVMWRPDKNKLP 377
PLL W++ PY ++L+ +FN + + + A RLKG W L K LP
Sbjct: 378 PLLDWVLVPYTQQNLTWTQHAFNEKMSEVQGVAKEAFGRLKGRWACLQKRT-EVKLQDLP 436
Query: 378 SIILVCCLLHNIIIDCEDELLPDVQLPDHHDTGYSEEKCEQVDPNGKIMRDVITGYL 434
+++ CC+LHNI E+++ P++ + D E V N RD I+ L
Sbjct: 437 TVLGACCVLHNICEMREEKMEPELMVEVIDDEVLPENVLRSV--NAMKARDTISHNL 491
>AT4G29780.1 | chr4:14579859-14581481 FORWARD LENGTH=541
Length = 540
Score = 114 bits (285), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 132/275 (48%), Gaps = 22/275 (8%)
Query: 147 KQVAIAMRRLASGDSQVSVGAAFGVGQSTVSQVTWRFIESMEERAR-HHLVWPGQERMEQ 205
K+V + + RLA+G V FG+G ST ++ ++ + +L+WP +
Sbjct: 250 KRVGVCVWRLATGAPLRHVSERFGLGISTCHKLVIEVCRAIYDVLMPKYLLWPSDSEINS 309
Query: 206 IKARFEAESGLPNCCGAIDATHIIMTLPAVESSEDWC------DPAKNYSMFLQGIVDDE 259
KA+FE+ +PN G+I THI + P V + + + +YS+ +QG+V+ +
Sbjct: 310 TKAKFESVHKIPNVVGSIYTTHIPIIAPKVHVAAYFNKRHTERNQKTSYSITVQGVVNAD 369
Query: 260 MRFIDIVTGWPGSMMFSRLLKCSGFFKHCDAGTRLDGPVMVSAENGEIRE-YIVGNNCYP 318
F D+ G PGS+ ++L+ S + A G +R+ +IVGN+ +P
Sbjct: 370 GIFTDVCIGNPGSLTDDQILEKSSLSRQ-------------RAARGMLRDSWIVGNSGFP 416
Query: 319 LLPWLMTPYEGESLSAPMASFNARQKAARTLGPRALSRLKGSWRILNKVMWRPDKNKLPS 378
L +L+ PY ++L+ +FN + + A RLKG W L K LP
Sbjct: 417 LTDYLLVPYTRQNLTWTQHAFNESIGEIQGIATAAFERLKGRWACLQKRT-EVKLQDLPY 475
Query: 379 IILVCCLLHNIIIDCEDELLPDVQLPDHHDTGYSE 413
++ CC+LHNI ++E+LP+++ D E
Sbjct: 476 VLGACCVLHNICEMRKEEMLPELKFEVFDDVAVPE 510
>AT3G19120.1 | chr3:6609678-6611018 REVERSE LENGTH=447
Length = 446
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 119/256 (46%), Gaps = 17/256 (6%)
Query: 143 LSVEKQVAIAMRRLASGDSQVSVGAAFGVGQSTVSQVTWRFIESMEERARHHLVWP---- 198
L + VA+ + RLA G S ++ + + + +S++T +M R ++P
Sbjct: 146 LPADYAVAMVLSRLAHGCSAKTLASRYSLDPYLISKIT-----NMVTRLLATKLYPEFIK 200
Query: 199 ---GQERMEQIKARFEAESGLPNCCGAIDATHIIMTLPAVESSEDWCDPAKNY-SMFLQG 254
G+ R+ + FE + LPN CGAID+T + + + + Y ++ LQ
Sbjct: 201 IPVGKRRLIETTQGFEELTSLPNICGAIDSTPVKLRRRTKLNPRNIYGCKYGYDAVLLQV 260
Query: 255 IVDDEMRFIDIVTGWPGSMMFSRLLKCSGFFKHCDAGTRLDGPVMVSAENGEIREYIVGN 314
+ D + F D+ PG S + S +K +G + V ++ +R YIVG+
Sbjct: 261 VADHKKIFWDVCVKAPGGEDDSSHFRDSLLYKRLTSGDIVWEKV-INIRGHHVRPYIVGD 319
Query: 315 NCYPLLPWLMTPYE-GESLSAPMASFNARQKAARTLGPRALSRLKGSWRILNKVMWRPDK 373
CYPLL +LMTP+ S + P F+ R++ A+ LK W+IL +
Sbjct: 320 WCYPLLSFLMTPFSPNGSGTPPENLFDGMLMKGRSVVVEAIGLLKARWKILQSL--NVGV 377
Query: 374 NKLPSIILVCCLLHNI 389
N P I+ CC+LHN+
Sbjct: 378 NHAPQTIVACCVLHNL 393
>AT1G72270.1 | chr1:27199733-27211122 REVERSE LENGTH=2846
Length = 2845
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 83/158 (52%), Gaps = 21/158 (13%)
Query: 249 SMFLQGIVDDEMRFIDIVTGWPGSMMFSRLLKCSGFFKHCD-----AGTRLDGPVMVSAE 303
S+ +Q +VD RF+DI GWP +M + + + F + A T+L V+V
Sbjct: 206 SILVQALVDSNGRFVDISAGWPSTMKPEAIFRQTKLFSIAEEVLSGAPTKLGNGVLVP-- 263
Query: 304 NGEIREYIVGNNCYPLLPWLMTPYEGESLSAPMASFNARQKAARTLGPR----ALSRLKG 359
YI+G++C PLLPWL+TPY+ L++ SF G A ++++
Sbjct: 264 -----RYILGDSCLPLLPWLVTPYD---LTSDEESFREEFNNVVHTGLHSVEIAFAKVRA 315
Query: 360 SWRILNKVMWRPDKNK-LPSIILVCCLLHNIIIDCEDE 396
WRIL+K W+P+ + +P +I CLLHN +++ D+
Sbjct: 316 RWRILDK-KWKPETIEFMPFVITTGCLLHNFLVNSGDD 352
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.320 0.137 0.431
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 8,579,457
Number of extensions: 340448
Number of successful extensions: 750
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 736
Number of HSP's successfully gapped: 6
Length of query: 436
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 334
Effective length of database: 8,310,137
Effective search space: 2775585758
Effective search space used: 2775585758
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 113 (48.1 bits)