BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os07g0129700 Os07g0129700|AB007623
         (355 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os07g0129700  OSH15 protein (Homeobox gene)                       449   e-126
Os03g0727000  Similar to Homeobox protein OSH1                    275   5e-74
Os03g0771500  Knotted1-type homeobox protein OSH43                241   7e-64
Os01g0302500  Knotted1-type homeobox protein OSH6                 187   8e-48
Os03g0727200  Similar to HOS13 protein (Fragment)                 186   3e-47
Os05g0129700  KNOX class homeodomain protein (Knotted1-type ...   184   9e-47
Os03g0772100  Similar to Knotted1-interacting protein             159   3e-39
Os03g0673500                                                      102   3e-22
Os03g0673000  Similar to Knotted1-type homeobox protein OSH1...    89   5e-18
Os03g0123500  Similar to HOS66 protein                             83   4e-16
Os06g0646600  KNOX family class 2 homeodomain protein              82   5e-16
Os02g0182800  Similar to NTH23 protein                             71   1e-12
Os08g0292900  OSH45 protein                                        71   1e-12
>Os07g0129700 OSH15 protein (Homeobox gene)
          Length = 355

 Score =  449 bits (1156), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 235/355 (66%), Positives = 235/355 (66%)

Query: 1   MDQSFGNLXXXXXXXXXXXXXXXXFXXXXXXXXXXXXXXXXXXXXXHQXXXXXGPSQYXX 60
           MDQSFGNL                F                     HQ     GPSQY  
Sbjct: 1   MDQSFGNLGGGGGAGGSGKAAASSFLQLPLSTAAAATAYYGTPLALHQAAAAAGPSQYHG 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMAHPQYSALLAAYLDCQKVGAPPEV 120
                                              MAHPQYSALLAAYLDCQKVGAPPEV
Sbjct: 61  HGHPHHGGGHHHSKHGGAGGGEISAAEAESIKAKIMAHPQYSALLAAYLDCQKVGAPPEV 120

Query: 121 LERLTATAAKLDARPPGRHDARDPELDQFMEAYCNMLAKYREELTRPIDEAMEFLKRVES 180
           LERLTATAAKLDARPPGRHDARDPELDQFMEAYCNMLAKYREELTRPIDEAMEFLKRVES
Sbjct: 121 LERLTATAAKLDARPPGRHDARDPELDQFMEAYCNMLAKYREELTRPIDEAMEFLKRVES 180

Query: 181 QLDTIXXXXXXXXXXXXXXXXXXXKSECVGSSEDDMDPSGRENEPPEIDPRAEDKELKFQ 240
           QLDTI                   KSECVGSSEDDMDPSGRENEPPEIDPRAEDKELKFQ
Sbjct: 181 QLDTIAGGAHGGGAGSARLLLADGKSECVGSSEDDMDPSGRENEPPEIDPRAEDKELKFQ 240

Query: 241 XXXXXXXXXXXXRQEFSXXXXXXXXXXEARQKLLHWWELHYKWPYPSETEKIALAESTGL 300
                       RQEFS          EARQKLLHWWELHYKWPYPSETEKIALAESTGL
Sbjct: 241 LLKKYSGYLSSLRQEFSKKKKKGKLPKEARQKLLHWWELHYKWPYPSETEKIALAESTGL 300

Query: 301 DQKQINNWFINQRKRHWKPSEDMPFVMMEGFHPQNAAALYMDGPFMADGMYRLGS 355
           DQKQINNWFINQRKRHWKPSEDMPFVMMEGFHPQNAAALYMDGPFMADGMYRLGS
Sbjct: 301 DQKQINNWFINQRKRHWKPSEDMPFVMMEGFHPQNAAALYMDGPFMADGMYRLGS 355
>Os03g0727000 Similar to Homeobox protein OSH1
          Length = 269

 Score =  275 bits (702), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 143/252 (56%), Positives = 166/252 (65%), Gaps = 16/252 (6%)

Query: 108 YLDCQKVGAPPEVLERLTATAAKLDARPPGRHD----ARDPELDQFMEAYCNMLAKYREE 163
           YLDCQKVGAPPEV  RLTA A  L+ R          A +PELDQFMEAY  ML KYREE
Sbjct: 29  YLDCQKVGAPPEVAARLTAVAQDLELRQRTALGVLGAATEPELDQFMEAYHEMLVKYREE 88

Query: 164 LTRPIDEAMEFLKRVESQLDTIXXXXXXXXXXXXXXXXXXXKSECVGSSEDDMDPSGREN 223
           LTRP+ EAMEFL+RVE+QL+T+                        GSSE+D + SG E 
Sbjct: 89  LTRPLQEAMEFLRRVETQLNTLSISGRSLRNIL-----------SSGSSEEDQEGSGGET 137

Query: 224 EPPEIDPRAEDKELKFQXXXXXXXXXXXXRQEFSXXXXXXXXXXEARQKLLHWWELHYKW 283
           E PEID    D+ELK              +QE S          +ARQ+LL+WWELHYKW
Sbjct: 138 ELPEIDAHGVDQELKHHLLKKYSGYLSSLKQELSKKKKKGKLPKDARQQLLNWWELHYKW 197

Query: 284 PYPSETEKIALAESTGLDQKQINNWFINQRKRHWKPSEDMPFVMMEGFHPQNAAALYMDG 343
           PYPSE++K+ALAESTGLD KQINNWFINQRKRHWKPS++M FVMM+G+HP NAAA YMDG
Sbjct: 198 PYPSESQKVALAESTGLDLKQINNWFINQRKRHWKPSDEMQFVMMDGYHPTNAAAFYMDG 257

Query: 344 PFMAD-GMYRLG 354
            F+ D G+YRLG
Sbjct: 258 HFINDGGLYRLG 269
>Os03g0771500 Knotted1-type homeobox protein OSH43
          Length = 341

 Score =  241 bits (615), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 143/284 (50%), Positives = 165/284 (58%), Gaps = 54/284 (19%)

Query: 96  MAHPQYSALLAAYLDCQKVGAPPEVLERLTATAA-----KLDARPPGRHDAR---DP-EL 146
           M+HPQYSALLAAYL C+KVGAPP+VL +LTA  A     + D  P  RH+ +   DP +L
Sbjct: 88  MSHPQYSALLAAYLGCKKVGAPPDVLTKLTAVPAAQQLDEADGHPRRRHEPQRDDDPDQL 147

Query: 147 DQFMEAYCNMLAKYREELTRPIDEAMEFLKRVESQLDTIXXXXXXXXXXXXXXXXXXXKS 206
           DQFM+AYC+ML +YREEL RPI EA EF  RVE+QLD++                     
Sbjct: 148 DQFMDAYCSMLTRYREELERPILEAAEFFSRVETQLDSLAES----------------NC 191

Query: 207 ECVGSSEDDMDPSGRENEPPEIDPRAEDKELKFQXXXXXXXXXXXXRQEFSXXXXXXXXX 266
           E  GSSE++ DPS              DK+LK Q            RQ FS         
Sbjct: 192 EGTGSSEEEQDPS--------------DKQLKHQLLRKYGGSLGDLRQVFSKRTKKGKLP 237

Query: 267 XEARQKLLHWWELHYKWPYPSETEKIALAESTGLDQKQINNWFINQRKRHWKPS--EDMP 324
            EARQKLLHWWELHYKWPYPSE EK+ LA++TGLDQKQINNWFINQRKRHWKP+      
Sbjct: 238 KEARQKLLHWWELHYKWPYPSEMEKMTLAQTTGLDQKQINNWFINQRKRHWKPTPVAGTA 297

Query: 325 FVMME----GFHPQN---------AAALYMDGPFMADGMYRLGS 355
           F  ME    GF             A  LYM  PF+ DGMYRLGS
Sbjct: 298 FPTMEAAGGGFRHSGHGGGLAAAAALPLYMGRPFVVDGMYRLGS 341
>Os01g0302500 Knotted1-type homeobox protein OSH6
          Length = 301

 Score =  187 bits (476), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 104/254 (40%), Positives = 130/254 (51%), Gaps = 15/254 (5%)

Query: 97  AHPQYSALLAAYLDCQKVGAPPEV---LERLTATAAKLDARPPGRHDARDPELDQFMEAY 153
            HP+Y  LL+AY++C+KVGAPPEV   L+ +                  DPELD+FMEAY
Sbjct: 49  GHPRYPTLLSAYIECRKVGAPPEVASLLKEIGRERRAGGGGGGAGQIGVDPELDEFMEAY 108

Query: 154 CNMLAKYREELTRPIDEAMEFLKRVESQLDTIXXXXXXXXXXXXXXXXXXXKS----ECV 209
           C +L +Y+EEL+RP DEA  FL  +++QL  +                    S    +C 
Sbjct: 109 CRVLVRYKEELSRPFDEAASFLSSIQTQLSNLCSGATSPPATTATHSDEMVGSSDEDQCS 168

Query: 210 GSSEDDMDPSGRENEPPEIDPRAEDKELKFQXXXXXXXXXXXXRQEFSXXXXXXXXXXEA 269
           G  E DM   G+E        R  D ELK              R EF           +A
Sbjct: 169 G--ETDMLDIGQEQ-----SSRLADHELKEMLLKKYSGCLSRLRSEFLKKRKKGKLPKDA 221

Query: 270 RQKLLHWWELHYKWPYPSETEKIALAESTGLDQKQINNWFINQRKRHWKPSEDMPFVMME 329
           R  LL WW  HY+WPYP+E +K+ LA  TGLD KQINNWFINQRKRHWKPS+ M F +ME
Sbjct: 222 RSALLEWWNTHYRWPYPTEEDKLRLAARTGLDPKQINNWFINQRKRHWKPSDGMRFALME 281

Query: 330 GF-HPQNAAALYMD 342
           G     +   LY D
Sbjct: 282 GVAGGSSGTTLYFD 295
>Os03g0727200 Similar to HOS13 protein (Fragment)
          Length = 365

 Score =  186 bits (471), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 116/260 (44%), Positives = 147/260 (56%), Gaps = 14/260 (5%)

Query: 96  MAHPQYSALLAAYLDCQKVGAPPEVLERLTATAAKLDARPPGRHDA-------RDPELDQ 148
           ++HP+Y  LLAA+LDC KVG P E  E + A A   +AR      A        DPEL  
Sbjct: 78  VSHPRYHRLLAAFLDCHKVGCPAEAAEEIAAAARVREARQRAAAAASRMPPAPEDPELKL 137

Query: 149 FMEAYCNMLAKYREELTRPIDEAMEFLKRVESQLDTIXX---XXXXXXXXXXXXXXXXXK 205
             E YC +L + +EEL+RP+ EA EFL+ VES+L++I                       
Sbjct: 138 VTEDYCKLLVECKEELSRPLQEAEEFLRTVESELNSINSGPPLTALISESKAGLDSSDDD 197

Query: 206 SECVGSSEDDMDPSGRENEPPEIDPRAEDKELKFQXXXXXXXXXXXXRQEFSXXXXXXXX 265
               GS  + M+ +  + +   IDPR++DK LK              R+E S        
Sbjct: 198 EHEDGSGMEMME-AAEDEDLGIIDPRSDDKALKRHLLRKYSGYLGGLRKELSKKRKKGKL 256

Query: 266 XXEARQKLLHWWELHYKWPYPSETEKIALAESTGLDQKQINNWFINQRKRHWKPSEDMPF 325
             EARQKLL WWELHY+WP PSE EKIALAESTGL+QKQINN FINQRKRHWKP+E+M F
Sbjct: 257 PKEARQKLLTWWELHYRWPNPSEMEKIALAESTGLEQKQINNCFINQRKRHWKPTEEMEF 316

Query: 326 VMMEGFHPQN---AAALYMD 342
            +ME +H Q+   AAA Y+D
Sbjct: 317 AVMEAYHHQSTDAAAAFYVD 336
>Os05g0129700 KNOX class homeodomain protein (Knotted1-type homeobox protein
           OSH71)
          Length = 311

 Score =  184 bits (467), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 106/256 (41%), Positives = 132/256 (51%), Gaps = 21/256 (8%)

Query: 97  AHPQYSALLAAYLDCQKVGAPPEVLERLTATAAKLDARPPGRHDAR----DPELDQFMEA 152
            HP Y +LL+AY++C+KVGAPPEV   L     +      G         DPELD+FME 
Sbjct: 61  GHPSYPSLLSAYIECRKVGAPPEVTTLLEEIGREGRGGGGGATAGGEIGLDPELDEFMET 120

Query: 153 YCNMLAKYREELTRPIDEAMEFLKRVESQLDTIXXXXXXXXXXXXXXXXXXXKSECVGSS 212
           YC +L +Y+EELTRP DEA  FL  + +QL ++                     E VGSS
Sbjct: 121 YCRVLERYKEELTRPFDEAASFLTGIHTQLASLCGGAPPPTDN---------SDEMVGSS 171

Query: 213 EDDMDPSGRENEPPEI----DPRAEDKELKFQXXXXXXXXXXXXRQEFSXXXXXXXXXXE 268
           ED+  P   + +  +       R  D ELK              R EF           +
Sbjct: 172 EDE--PCSGDADAADFGQEHSSRLADHELKEMLLKKYSGCLSRLRSEFLKKRKKGKLPKD 229

Query: 269 ARQKLLHWWELHYKWPYPSETEKIALAESTGLDQKQINNWFINQRKRHWKPSEDMPFVMM 328
           AR  L+ WW  HY+WPYP+E +K+ LA  TGLD KQINNWFINQRKRHWKPSEDM F +M
Sbjct: 230 ARSALMDWWNTHYRWPYPTEEDKVRLAAMTGLDPKQINNWFINQRKRHWKPSEDMRFALM 289

Query: 329 EGFH--PQNAAALYMD 342
           EG      +   LY D
Sbjct: 290 EGVTGGSSSGTTLYFD 305
>Os03g0772100 Similar to Knotted1-interacting protein
          Length = 385

 Score =  159 bits (401), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 130/330 (39%), Positives = 151/330 (45%), Gaps = 100/330 (30%)

Query: 96  MAHPQYSALLAAYLDCQKVGAPPEVLERLTATAA---KLDA---------RPPGRHDARD 143
           M+HPQYSALLAAYL C+KVGAPP+VL +LTA  A   +LDA          P    D  D
Sbjct: 86  MSHPQYSALLAAYLGCKKVGAPPDVLTKLTAVPAAQQQLDAADGHPRRRHEPRRDDDVPD 145

Query: 144 PELDQFMEAYCNMLAKYREELTRPIDEAMEFLKRVESQLDTIXXXXXXXXXXXXXXXXXX 203
            +LDQFM A          +  +    A +   R   QLD+I                  
Sbjct: 146 HQLDQFMHA----------DEVQGGAGAADPGSRGVLQLDSIADS--------------- 180

Query: 204 XKSECVGSSEDDMDPSGRENEPPEIDPRAEDKELKFQXXXXXXXXXXXXRQEFSXXXXXX 263
              E  GSSE++ D S  E E  EIDP   DK+LK Q            RQ FS      
Sbjct: 181 -NCEGTGSSEEEQDTSCPEAE--EIDP--SDKQLKHQLLMKYGGSLGDLRQAFSKRTKKG 235

Query: 264 XXXXEARQKLLHWWELHY-KWPYPS----------------------------------- 287
               EAR KLLHWWELHY KWPYPS                                   
Sbjct: 236 KLPKEARLKLLHWWELHYDKWPYPSVRTHIYASHLINSTTFFCTKLDLMKMRELLGCTCV 295

Query: 288 ---ETEKIALAESTGLDQKQINNWFINQRKRHWKPS--EDMPFVMME----GF-HPQNAA 337
              E EK+ LA++TGLDQKQI+NWFINQRKRHWKP+    M F  +E    GF H  +  
Sbjct: 296 YEQEVEKMTLAQTTGLDQKQISNWFINQRKRHWKPTPVAGMTFPTVEAAGGGFRHSGHDG 355

Query: 338 A-----------LYMDG-PFMADGMYRLGS 355
                       LYM   PF+ DGMYRLGS
Sbjct: 356 GLAAAAAAAALPLYMGSWPFVVDGMYRLGS 385
>Os03g0673500 
          Length = 337

 Score =  102 bits (255), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 47/71 (66%), Positives = 54/71 (76%), Gaps = 7/71 (9%)

Query: 268 EARQKLLHWWELHYKWPYPSETEKIALAESTGLDQKQINNWFINQRKRHWKP----SEDM 323
           +AR KLL WW LHY+WPYPSE EK ALAESTGLD+KQ+ NWFINQRKRHWKP    + D 
Sbjct: 239 DARHKLLQWWHLHYRWPYPSEAEKAALAESTGLDKKQVTNWFINQRKRHWKPKPAAAMDA 298

Query: 324 PFVMMEGFHPQ 334
            F+ M   HP+
Sbjct: 299 GFLQM---HPR 306

 Score =  102 bits (253), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 49/97 (50%), Positives = 65/97 (67%), Gaps = 7/97 (7%)

Query: 96  MAHPQYSALLAAYLDCQKVGAPPEVLERLTATAAKLDARP-------PGRHDARDPELDQ 148
           M+HP Y +LL A++DC+KVGAPPEV+ RL++ A   D          P +  A DPELDQ
Sbjct: 76  MSHPLYPSLLRAFVDCKKVGAPPEVVGRLSSLAVVTDVPQYSGDRCLPAQQPAADPELDQ 135

Query: 149 FMEAYCNMLAKYREELTRPIDEAMEFLKRVESQLDTI 185
           FME YC ML +Y +EL RPI EA EF + +E Q+D++
Sbjct: 136 FMETYCYMLTRYGQELARPIQEAEEFFRGIEEQIDSL 172
>Os03g0673000 Similar to Knotted1-type homeobox protein OSH10 (Fragment)
          Length = 77

 Score = 89.0 bits (219), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 39/45 (86%), Positives = 42/45 (93%)

Query: 268 EARQKLLHWWELHYKWPYPSETEKIALAESTGLDQKQINNWFINQ 312
           +ARQKLLHWW+LHY+WPYPSE EK ALAESTGLD KQINNWFINQ
Sbjct: 33  DARQKLLHWWQLHYRWPYPSELEKAALAESTGLDAKQINNWFINQ 77
>Os03g0123500 Similar to HOS66 protein
          Length = 287

 Score = 82.8 bits (203), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 68/243 (27%), Positives = 97/243 (39%), Gaps = 24/243 (9%)

Query: 97  AHPQYSALLAAYLDCQKVGAPPEVLERLTATAAKLDA---------RP-PGRHDARDPEL 146
            HP    L+AA++ C +V  P + L  + A  A+            RP    HD +  EL
Sbjct: 32  VHPLCEQLVAAHVGCLRVATPIDHLPLIDAQLAQSSGLLHSYAAHHRPFLSPHDKQ--EL 89

Query: 147 DQFMEAYCNMLAKYREELTRPID----EAMEFLKRVESQLDTIXXXXXXXXXXXXXXXXX 202
           D F+  Y  +L  +RE+L + +     EA+   + +E  L  +                 
Sbjct: 90  DSFLAQYMMLLCSFREQLQQHVRVHAVEAVMACREIEQSLQDLTGATLEEGTGATMSEDE 149

Query: 203 XXKSECVGS----SEDDMDPSGRENEPPEIDPRA----EDKELKFQXXXXXXXXXXXXRQ 254
              +  +        D  D  G     P    R+      +ELK +            R+
Sbjct: 150 DETAPMLEGPMDMGSDGHDLMGFGPLMPTDSERSLMERVRQELKIELKQGFKSRIEDVRE 209

Query: 255 EFSXXXXXXXXXXEARQKLLHWWELHYKWPYPSETEKIALAESTGLDQKQINNWFINQRK 314
           E            +    L  WW+ H KWPYP+E +K  L E TGL  KQINNWFINQRK
Sbjct: 210 EILRKRRAGKLPGDTTTILKQWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRK 269

Query: 315 RHW 317
           R+W
Sbjct: 270 RNW 272
>Os06g0646600 KNOX family class 2 homeodomain protein
          Length = 317

 Score = 82.4 bits (202), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 68/243 (27%), Positives = 97/243 (39%), Gaps = 22/243 (9%)

Query: 97  AHPQYSALLAAYLDCQKVGAPPEVLERLTA-----------TAAKLDARPPGRHDARDPE 145
           AHP Y  LL A++ C +V  P + L R+ A             A   A   G   +   E
Sbjct: 53  AHPLYERLLEAHVACLRVATPVDQLPRIDAQIAARPPPLAAATAAAAAAAAGGAPSGGEE 112

Query: 146 LDQFMEAYCNMLAKYREELTRPID----EAMEFLKRVESQLDTIXXXXXXXXXXXXXXXX 201
           LD FM  Y  +L  ++E+L + +     EA+     +E  L ++                
Sbjct: 113 LDLFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWELEQTLQSLTGASPREGSGATMSDD 172

Query: 202 XXXKSECVGSSEDDMDPSGRENEPPEIDPRAED-------KELKFQXXXXXXXXXXXXRQ 254
              + +   +  D  D S      P +    E        +ELK +            R+
Sbjct: 173 EDNQVDSESNMFDGNDGSDGMGFGPLMLTEGERSLVERVRQELKHELKQGYREKLVDIRE 232

Query: 255 EFSXXXXXXXXXXEARQKLLHWWELHYKWPYPSETEKIALAESTGLDQKQINNWFINQRK 314
           E            +    L  WW+ H KWPYP+E +K  L + TGL  KQINNWFINQRK
Sbjct: 233 EILRKRRAGKLPGDTASTLKAWWQAHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRK 292

Query: 315 RHW 317
           R+W
Sbjct: 293 RNW 295
>Os02g0182800 Similar to NTH23 protein
          Length = 212

 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 29/45 (64%), Positives = 34/45 (75%)

Query: 273 LLHWWELHYKWPYPSETEKIALAESTGLDQKQINNWFINQRKRHW 317
           L  WW+ H KWPYP+E +K  L + TGL  KQINNWFINQRKR+W
Sbjct: 141 LKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKRNW 185
>Os08g0292900 OSH45 protein
          Length = 194

 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 29/45 (64%), Positives = 34/45 (75%)

Query: 273 LLHWWELHYKWPYPSETEKIALAESTGLDQKQINNWFINQRKRHW 317
           L  WW+ H KWPYP+E +K  L + TGL  KQINNWFINQRKR+W
Sbjct: 134 LKAWWQSHAKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNW 178
  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.317    0.133    0.410 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 8,616,422
Number of extensions: 291200
Number of successful extensions: 977
Number of sequences better than 1.0e-10: 13
Number of HSP's gapped: 957
Number of HSP's successfully gapped: 16
Length of query: 355
Length of database: 17,035,801
Length adjustment: 102
Effective length of query: 253
Effective length of database: 11,709,973
Effective search space: 2962623169
Effective search space used: 2962623169
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 156 (64.7 bits)