Os07g0129700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : OSH15 protein (Homeobox gene).
FiT-DB / Search/ Help/ Sample detail
|
Os07g0129700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : OSH15 protein (Homeobox gene).
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 162.88 | 0.6 | 1.69 | -2.99 | 0.0867 | -125 | 0.0517 | -266 | -0.138 | 13.8 | 15 | 1275 | -- | -- |
| 166.73 | 0.606 | 3 | -0.209 | 0.101 | 1.29 | -0.188 | -- | -0.141 | 11.7 | 15 | 1275 | -- | -- |
| 162.87 | 0.594 | 1.69 | -3 | 0.0914 | -128 | -- | -273 | -0.144 | 13.9 | 14.96 | 1275 | -- | -- |
| 163.83 | 0.596 | 3.01 | -0.162 | 0.0825 | 1.32 | -- | -- | -0.14 | 11.6 | 14.5 | 2003 | -- | -- |
| 163.34 | 0.595 | 1.69 | -3 | -- | -128 | -- | -273 | -0.141 | -- | 14.96 | 1275 | -- | -- |
| 169.81 | 0.611 | 3.01 | -0.267 | 0.0838 | -- | 0.0635 | -- | -0.154 | 13.6 | -- | -- | -- | -- |
| 169.82 | 0.61 | 3.01 | -0.265 | 0.0839 | -- | -- | -- | -0.154 | 13 | -- | -- | -- | -- |
| 164.16 | 0.597 | 3.01 | -0.161 | -- | 1.21 | -- | -- | -0.142 | -- | 14.47 | 2006 | -- | -- |
| 164.38 | 0.597 | 3 | -- | 0.0602 | 1.35 | -- | -- | -0.12 | 12.8 | 14.54 | 2013 | -- | -- |
| 170.25 | 0.61 | 3.01 | -0.268 | -- | -- | -- | -- | -0.156 | -- | -- | -- | -- | -- |
| 171.67 | 0.613 | 3 | -- | 0.0883 | -- | -- | -- | -0.125 | 13.2 | -- | -- | -- | -- |
| 164.76 | 0.598 | 3 | -- | -- | 1.3 | -- | -- | -0.116 | -- | 14.54 | 2017 | -- | -- |
| 172.15 | 0.612 | 3 | -- | -- | -- | -- | -- | -0.126 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 155.42 | wind | 9.0 | 10 | > th | dose independent | rect. | 13 | 1 |
| 13 | 155.42 | wind | 9.0 | 10 | > th | dose dependent | rect. | 13 | 1 |
| 54 | 159.32 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 8 | 9 |
| 56 | 159.72 | radiation | 1.0 | 270 | < th | dose independent | rect. | 9 | 1 |
| 57 | 159.72 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 9 | 1 |
| 60 | 160.02 | wind | 9.0 | 270 | > th | dose dependent | rect. | 10 | 4 |
| 70 | 160.05 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 6 | 3 |
| 71 | 160.05 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 6 | 3 |
| 91 | 160.28 | wind | 9.0 | 270 | > th | dose independent | rect. | 10 | 3 |
| 118 | 160.53 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 6 | 6 |
| 119 | 160.53 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 6 | 6 |
| 145 | 160.88 | radiation | 1.0 | 90 | < th | dose independent | rect. | 8 | 4 |
| 146 | 160.88 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 8 | 4 |
| 164 | 161.10 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 6 | 4 |
| 165 | 161.10 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 6 | 4 |
| 190 | 161.36 | temperature | 15.0 | 720 | > th | dose independent | rect. | 4 | 18 |
| 191 | 161.39 | wind | 9.0 | 270 | > th | dose dependent | sin | 7 | NA |
| 211 | 161.59 | humidity | 90.0 | 720 | > th | dose independent | rect. | 8 | 9 |
| 217 | 161.66 | radiation | 10.0 | 10 | < th | dose independent | rect. | 14 | 1 |
| 233 | 161.70 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 9 | 1 |
| 236 | 161.72 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 9 | 13 |
| 247 | 161.82 | temperature | 15.0 | 270 | > th | dose independent | rect. | 1 | 23 |
| 253 | 161.86 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 7 | 4 |
| 265 | 161.92 | wind | 9.0 | 270 | > th | dose independent | sin | 6 | NA |
| 266 | 161.92 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 7 | 4 |
| 276 | 161.97 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 7 | 4 |
| 287 | 162.04 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 310 | 162.19 | humidity | 50.0 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 317 | 162.21 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 4 | 4 |
| 318 | 162.21 | temperature | 15.0 | 720 | > th | dose independent | rect. | 10 | 6 |
| 327 | 162.23 | wind | 1.0 | 720 | > th | dose independent | rect. | 11 | 6 |
| 376 | 162.32 | wind | 9.0 | 10 | > th | dose independent | rect. | 19 | 19 |
| 380 | 162.33 | wind | 9.0 | 270 | < th | dose independent | sin | 7 | NA |
| 394 | 162.38 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 1 | 7 |
| 409 | 162.42 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 9 | 4 |
| 414 | 162.44 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 6 | 3 |
| 415 | 162.44 | humidity | 50.0 | 43200 | < th | dose independent | rect. | 5 | 3 |
| 416 | 162.44 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 21 | 11 |
| 417 | 162.45 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 3 | 3 |
| 423 | 162.48 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 9 | 1 |
| 435 | 162.54 | wind | 7.0 | 10 | > th | dose dependent | rect. | 19 | 19 |
| 436 | 162.55 | temperature | 15.0 | 720 | > th | dose independent | rect. | 7 | 14 |
| 440 | 162.58 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 9 | 1 |
| 441 | 162.58 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 9 | 1 |
| 445 | 162.62 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 458 | 162.70 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 24 | 1 |
| 459 | 162.70 | temperature | 15.0 | 1440 | < th | dose independent | rect. | 22 | 4 |
| 461 | 162.70 | temperature | 15.0 | 1440 | < th | dose independent | rect. | 9 | 17 |
| 464 | 162.70 | temperature | 15.0 | 1440 | < th | dose dependent | rect. | 23 | 3 |
| 465 | 162.71 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 1 | 5 |
| 466 | 162.71 | humidity | 90.0 | 720 | < th | dose independent | rect. | 9 | 7 |
| 469 | 162.71 | temperature | 15.0 | 1440 | < th | dose dependent | rect. | 5 | 21 |
| 472 | 162.73 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 17 | 13 |
| 480 | 162.74 | temperature | 15.0 | 270 | > th | dose independent | rect. | 17 | 23 |
| 482 | 162.75 | temperature | 15.0 | 720 | > th | dose independent | rect. | 5 | 10 |
| 492 | 162.77 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 6 | 6 |
| 501 | 162.79 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 23 | 9 |
| 503 | 162.79 | wind | 7.0 | 1440 | > th | dose dependent | rect. | 7 | 1 |
| 512 | 162.81 | temperature | 15.0 | 1440 | < th | dose dependent | sin | 20 | NA |
| 513 | 162.81 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 1 | 12 |
| 518 | 162.84 | temperature | 15.0 | 1440 | < th | dose independent | rect. | 10 | 14 |
| 521 | 162.84 | temperature | 15.0 | 1440 | < th | dose dependent | rect. | 9 | 17 |
| 522 | 162.84 | temperature | 15.0 | 1440 | < th | dose dependent | rect. | 6 | 18 |
| 527 | 162.85 | temperature | 15.0 | 1440 | < th | dose dependent | rect. | 9 | 15 |
| 537 | 162.86 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 1 | 10 |
| 539 | 162.86 | humidity | 50.0 | 43200 | < th | dose dependent | rect. | 20 | 12 |
| 542 | 162.87 | temperature | 15.0 | 720 | > th | dose independent | rect. | 5 | 15 |
| 543 | 162.87 | temperature | 15.0 | 1440 | < th | dose dependent | rect. | 24 | 1 |
| 545 | 162.88 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 1 | 12 |
| 548 | 162.89 | temperature | 15.0 | 720 | > th | dose independent | rect. | 8 | 19 |
| 551 | 162.90 | temperature | 15.0 | 1440 | < th | dose independent | sin | 20 | NA |
| 552 | 162.90 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 21 | 16 |
| 559 | 162.92 | temperature | 15.0 | 1440 | > th | dose independent | sin | 20 | NA |
| 568 | 162.94 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 1 | 10 |
| 594 | 162.97 | temperature | 15.0 | 1440 | < th | dose independent | rect. | 24 | 1 |
| 615 | 163.01 | temperature | 20.0 | 720 | < th | dose independent | rect. | 11 | 3 |
| 618 | 163.01 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 12 | 1 |
| 630 | 163.02 | temperature | 15.0 | 720 | > th | dose independent | rect. | 7 | 22 |
| 636 | 163.03 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 24 | 12 |
| 638 | 163.03 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 24 | 12 |
| 664 | 163.07 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 24 | 10 |
| 675 | 163.09 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 22 | 14 |
| 678 | 163.09 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 6 | 9 |
| 681 | 163.09 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 22 | 14 |
| 686 | 163.10 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 5 | 13 |
| 704 | 163.12 | temperature | 15.0 | 720 | > th | dose independent | rect. | 17 | 18 |
| 705 | 163.12 | temperature | 15.0 | 1440 | < th | dose dependent | rect. | 22 | 6 |
| 713 | 163.14 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 4 | 9 |
| 716 | 163.14 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 10 | 20 |
| 727 | 163.15 | wind | 7.0 | 1440 | > th | dose independent | rect. | 4 | 4 |
| 736 | 163.16 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 6 | 12 |
| 751 | 163.17 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 1 | 21 |
| 773 | 163.19 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 12 | 18 |
| 809 | 163.23 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 9 | 3 |
| 838 | 163.26 | wind | 7.0 | 1440 | > th | dose independent | rect. | 7 | 1 |
| 848 | 163.26 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 20 | 20 |
| 866 | 163.29 | wind | 1.0 | 720 | < th | dose independent | rect. | 10 | 4 |
| 873 | 163.29 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 20 | 20 |
| 878 | 163.29 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 20 | 20 |
| 890 | 163.31 | wind | 1.0 | 720 | < th | dose independent | rect. | 9 | 6 |
| 897 | 163.31 | temperature | 15.0 | 1440 | < th | dose dependent | no | NA | NA |
| 899 | 163.31 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 20 | 13 |
| 900 | 163.31 | temperature | 15.0 | 1440 | < th | dose dependent | rect. | 17 | 18 |
| 931 | 163.31 | temperature | 15.0 | 1440 | < th | dose dependent | rect. | 21 | 23 |
| 932 | 163.32 | wind | 1.0 | 720 | > th | dose independent | rect. | 13 | 2 |
| 954 | 163.33 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 20 | 20 |