Os03g0123500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to HOS66 protein.
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Os03g0123500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to HOS66 protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 367.32 | 0.9 | 3.56 | -1.69 | 0.473 | -0.5 | 0.359 | 0.563 | -0.322 | 4.89 | 20.7 | 206 | -- | -- |
| 368.53 | 0.894 | 3.55 | -1.58 | 0.474 | -0.535 | 0.662 | -- | -0.297 | 4.94 | 20.74 | 204 | -- | -- |
| 367.57 | 0.893 | 3.56 | -1.71 | 0.472 | -0.495 | -- | 0.661 | -0.326 | 4.7 | 20.8 | 206 | -- | -- |
| 369.57 | 0.895 | 3.55 | -1.58 | 0.483 | -0.533 | -- | -- | -0.299 | 4.64 | 20.72 | 204 | -- | -- |
| 378.89 | 0.907 | 3.56 | -1.68 | -- | -0.378 | -- | 0.744 | -0.295 | -- | 20.7 | 206 | -- | -- |
| 379.63 | 0.913 | 3.52 | -1.42 | 0.382 | -- | 0.727 | -- | -0.179 | 5.57 | -- | -- | -- | -- |
| 380.84 | 0.914 | 3.52 | -1.42 | 0.387 | -- | -- | -- | -0.182 | 5.17 | -- | -- | -- | -- |
| 381.19 | 0.909 | 3.54 | -1.55 | -- | -0.499 | -- | -- | -0.25 | -- | 20 | 226 | -- | -- |
| 430.8 | 0.967 | 3.5 | -- | 0.408 | -0.256 | -- | -- | -0.0715 | 4.7 | 21 | 130 | -- | -- |
| 388.69 | 0.921 | 3.53 | -1.41 | -- | -- | -- | -- | -0.172 | -- | -- | -- | -- | -- |
| 433.93 | 0.974 | 3.49 | -- | 0.363 | -- | -- | -- | -0.0241 | 5.31 | -- | -- | -- | -- |
| 439.29 | 0.976 | 3.5 | -- | -- | -0.174 | -- | -- | -0.0494 | -- | 20.99 | 130 | -- | -- |
| 440.81 | 0.98 | 3.49 | -- | -- | -- | -- | -- | -0.0165 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 353.20 | wind | 7 | 10 | > th | dose independent | rect. | 17 | 17 |
| 3 | 353.59 | wind | 7 | 10 | > th | dose dependent | rect. | 17 | 17 |
| 5 | 353.69 | wind | 9 | 10 | > th | dose independent | rect. | 17 | 3 |
| 15 | 354.87 | wind | 7 | 10 | > th | dose dependent | rect. | 17 | 4 |
| 62 | 356.64 | wind | 7 | 10 | > th | dose dependent | rect. | 18 | 1 |
| 211 | 359.37 | temperature | 20 | 90 | > th | dose independent | rect. | 16 | 17 |
| 225 | 359.48 | wind | 9 | 90 | > th | dose independent | sin | 13 | NA |
| 291 | 359.93 | temperature | 20 | 270 | > th | dose independent | rect. | 13 | 20 |
| 296 | 360.09 | wind | 9 | 10 | < th | dose independent | sin | 13 | NA |
| 447 | 361.29 | wind | 9 | 10 | > th | dose independent | sin | 12 | NA |
| 448 | 361.30 | temperature | 20 | 90 | > th | dose dependent | rect. | 16 | 17 |
| 451 | 361.33 | wind | 9 | 90 | > th | dose dependent | sin | 13 | NA |
| 609 | 362.32 | temperature | 20 | 270 | > th | dose independent | rect. | 23 | 10 |
| 628 | 362.47 | temperature | 20 | 90 | > th | dose dependent | rect. | 24 | 9 |
| 695 | 362.96 | wind | 9 | 90 | < th | dose independent | sin | 14 | NA |
| 733 | 363.41 | radiation | 40 | 720 | < th | dose independent | rect. | 15 | 18 |
| 738 | 363.44 | temperature | 10 | 270 | > th | dose dependent | rect. | 23 | 10 |
| 758 | 363.55 | wind | 7 | 10 | > th | dose dependent | sin | 12 | NA |
| 776 | 363.72 | radiation | 1 | 720 | > th | dose dependent | rect. | 18 | 11 |
| 817 | 363.87 | radiation | 10 | 10 | < th | dose dependent | rect. | 7 | 4 |
| 829 | 364.04 | temperature | 30 | 720 | < th | dose independent | rect. | 18 | 12 |
| 834 | 364.12 | radiation | 1 | 4320 | < th | dose independent | rect. | 5 | 2 |
| 839 | 364.16 | radiation | 1 | 4320 | > th | dose independent | rect. | 5 | 2 |
| 851 | 364.25 | humidity | 90 | 14400 | < th | dose independent | rect. | 24 | 7 |
| 864 | 364.36 | humidity | 90 | 43200 | < th | dose independent | rect. | 4 | 5 |
| 878 | 364.46 | humidity | 80 | 43200 | > th | dose dependent | rect. | 5 | 5 |
| 880 | 364.47 | radiation | 1 | 4320 | > th | dose independent | rect. | 18 | 13 |
| 903 | 364.62 | radiation | 1 | 4320 | < th | dose independent | rect. | 23 | 8 |
| 905 | 364.63 | radiation | 1 | 4320 | < th | dose independent | rect. | 2 | 5 |
| 908 | 364.63 | radiation | 1 | 4320 | < th | dose independent | rect. | 19 | 12 |
| 960 | 364.87 | wind | 1 | 43200 | < th | dose independent | rect. | 2 | 1 |
| 966 | 364.94 | humidity | 90 | 14400 | < th | dose independent | rect. | 22 | 7 |
| 988 | 365.06 | wind | 1 | 43200 | < th | dose dependent | rect. | 2 | 1 |