Os03g0727200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to HOS13 protein (Fragment).
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Os03g0727200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to HOS13 protein (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 150.36 | 0.576 | 3.29 | 0.173 | 0.326 | 3.68 | -0.547 | 7.61 | 0.0987 | 7.25 | 8.9 | 19 | -- | -- |
| 151.53 | 0.573 | 3.27 | 0.136 | 0.328 | 1.85 | -0.536 | -- | 0.0982 | 7.11 | 8.971 | 18 | -- | -- |
| 151.15 | 0.573 | 3.29 | 0.161 | 0.326 | 3.67 | -- | 7.7 | 0.0992 | 7.12 | 8.9 | 18 | -- | -- |
| 152.25 | 0.575 | 3.27 | 0.129 | 0.331 | 1.8 | -- | -- | 0.105 | 7.13 | 8.902 | 18 | -- | -- |
| 156.73 | 0.583 | 3.3 | 0.163 | -- | 3.64 | -- | 7.98 | 0.103 | -- | 8.9 | 18 | -- | -- |
| 158.7 | 0.591 | 3.28 | 0.0502 | 0.308 | -- | -0.435 | -- | 0.0719 | 7.83 | -- | -- | -- | -- |
| 159.24 | 0.591 | 3.28 | 0.0383 | 0.31 | -- | -- | -- | 0.0721 | 7.68 | -- | -- | -- | -- |
| 157.99 | 0.585 | 3.28 | 0.125 | -- | 1.71 | -- | -- | 0.108 | -- | 8.9 | 18 | -- | -- |
| 152.64 | 0.575 | 3.28 | -- | 0.33 | 1.74 | -- | -- | 0.0901 | 7.11 | 8.9 | 18 | -- | -- |
| 164.41 | 0.599 | 3.29 | 0.0424 | -- | -- | -- | -- | 0.0766 | -- | -- | -- | -- | -- |
| 159.28 | 0.59 | 3.28 | -- | 0.31 | -- | -- | -- | 0.0678 | 7.67 | -- | -- | -- | -- |
| 158.39 | 0.586 | 3.28 | -- | -- | 1.64 | -- | -- | 0.0935 | -- | 8.9 | 18 | -- | -- |
| 164.45 | 0.599 | 3.29 | -- | -- | -- | -- | -- | 0.0719 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 144.57 | wind | 9.0 | 30 | > th | dose dependent | rect. | 11 | 1 |
| 30 | 145.38 | wind | 9.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 31 | 145.65 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 32 | 145.80 | wind | 9.0 | 30 | > th | dose independent | rect. | 11 | 1 |
| 34 | 145.88 | wind | 9.0 | 30 | > th | dose dependent | rect. | 18 | 18 |
| 42 | 146.11 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 43 | 146.57 | temperature | 20.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 62 | 146.62 | wind | 9.0 | 30 | > th | dose dependent | sin | 6 | NA |
| 75 | 147.01 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 76 | 147.03 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 80 | 147.12 | wind | 3.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 82 | 147.30 | wind | 3.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 89 | 147.49 | humidity | 80.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 94 | 147.57 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 96 | 147.57 | temperature | 30.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 97 | 147.57 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 101 | 147.57 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 103 | 147.57 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 108 | 147.57 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 109 | 147.57 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 110 | 147.57 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 115 | 147.57 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 116 | 147.64 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 120 | 147.70 | wind | 9.0 | 30 | < th | dose independent | sin | 5 | NA |
| 161 | 148.07 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 162 | 148.07 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 165 | 148.07 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 169 | 148.07 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 178 | 148.07 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 179 | 148.07 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 199 | 148.07 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 23 |
| 202 | 148.07 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 203 | 148.07 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 222 | 148.18 | atmosphere | 1000.0 | 90 | < th | dose independent | rect. | 18 | 1 |
| 226 | 148.18 | atmosphere | 1000.0 | 90 | < th | dose dependent | rect. | 18 | 1 |
| 235 | 148.26 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 263 | 148.47 | wind | 9.0 | 30 | > th | dose independent | sin | 5 | NA |
| 282 | 148.79 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 285 | 148.88 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 312 | 149.49 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 3 | 23 |
| 313 | 149.49 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 382 | 150.07 | humidity | 70.0 | 90 | < th | dose independent | rect. | 18 | 1 |
| 397 | 150.18 | radiation | 10.0 | 10 | < th | dose independent | rect. | 12 | 1 |
| 517 | 150.87 | wind | 1.0 | 10 | < th | dose independent | rect. | 1 | 3 |
| 518 | 150.92 | wind | 1.0 | 10 | < th | dose dependent | rect. | 1 | 3 |
| 533 | 151.10 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 4 | 1 |
| 541 | 151.21 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 3 | 22 |
| 552 | 151.36 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 3 | 3 |
| 583 | 151.41 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 5 | 2 |
| 614 | 151.62 | temperature | 20.0 | 720 | > th | dose independent | rect. | 4 | 1 |
| 673 | 151.73 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 5 | 5 |
| 676 | 151.77 | wind | 1.0 | 14400 | > th | dose independent | rect. | 5 | 2 |
| 682 | 151.78 | wind | 1.0 | 14400 | < th | dose independent | rect. | 5 | 2 |
| 694 | 151.81 | wind | 1.0 | 14400 | < th | dose independent | rect. | 5 | 4 |
| 724 | 151.91 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 10 | 1 |
| 729 | 151.94 | radiation | 10.0 | 90 | < th | dose independent | rect. | 10 | 1 |
| 746 | 151.98 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 4 | 22 |
| 749 | 152.01 | wind | 1.0 | 14400 | > th | dose independent | rect. | 4 | 5 |
| 771 | 152.11 | wind | 1.0 | 90 | < th | dose dependent | rect. | 7 | 1 |
| 772 | 152.12 | wind | 1.0 | 90 | < th | dose independent | rect. | 6 | 1 |
| 782 | 152.16 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 8 | 1 |
| 785 | 152.18 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 2 | 3 |
| 857 | 152.33 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 866 | 152.34 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 22 | 1 |
| 867 | 152.34 | wind | 1.0 | 10 | < th | dose independent | rect. | 7 | 2 |
| 869 | 152.34 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 22 | 1 |
| 872 | 152.35 | wind | 9.0 | 30 | < th | dose independent | no | NA | NA |
| 875 | 152.37 | wind | 9.0 | 30 | > th | dose independent | no | NA | NA |
| 929 | 152.40 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 21 | 2 |
| 933 | 152.41 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 7 | 2 |
| 946 | 152.43 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 22 | 1 |
| 981 | 152.52 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 21 | 11 |
| 983 | 152.53 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 1 | 9 |