BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os07g0102400 Os07g0102400|AK066373
         (286 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os07g0102400  Protein of unknown function DUF1084 family pro...   443   e-125
Os03g0120300  Protein of unknown function DUF1084 family pro...   275   3e-74
Os10g0537500  Protein of unknown function DUF1084 family pro...   274   5e-74
Os02g0683900  Protein of unknown function DUF1084 family pro...   270   1e-72
Os03g0565600  Protein of unknown function DUF1084 family pro...   106   2e-23

>Os07g0102400 Protein of unknown function DUF1084 family protein
          Length = 286

 Score =  443 bits (1140), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 225/286 (78%), Positives = 225/286 (78%)

Query: 1   MREPXXXXXXXXXXLRGFWEEVNESPAWQDGXXXXXXXXXXXXXXXXXIQLIRIQRRVPE 60
           MREP          LRGFWEEVNESPAWQDG                 IQLIRIQRRVPE
Sbjct: 1   MREPVVVAASSAAALRGFWEEVNESPAWQDGAFFSLSAAYALVSAVALIQLIRIQRRVPE 60

Query: 61  FGWTTQKVFHLMNFLVNGVRAXXXXXXXXXXXXSAKVYKXXXXXXXXXXFFSTYTLLVLF 120
           FGWTTQKVFHLMNFLVNGVRA            SAKVYK          FFSTYTLLVLF
Sbjct: 61  FGWTTQKVFHLMNFLVNGVRALVFGFHLHVFLLSAKVYKLVLLDLPGLLFFSTYTLLVLF 120

Query: 121 WAEIYHQARSLPTDKLRIIYIAVNAIIYTIQVCIWVYLGINDNPLVELXXXXXXXXXXXX 180
           WAEIYHQARSLPTDKLRIIYIAVNAIIYTIQVCIWVYLGINDNPLVEL            
Sbjct: 121 WAEIYHQARSLPTDKLRIIYIAVNAIIYTIQVCIWVYLGINDNPLVELVSKIFIVVVSFV 180

Query: 181 ALLGFSVYGGRLFFLLRRFPIESKGRKKKLYEVGTVTAICCACFLIRCIVVAISAFDSDV 240
           ALLGFSVYGGRLFFLLRRFPIESKGRKKKLYEVGTVTAICCACFLIRCIVVAISAFDSDV
Sbjct: 181 ALLGFSVYGGRLFFLLRRFPIESKGRKKKLYEVGTVTAICCACFLIRCIVVAISAFDSDV 240

Query: 241 SLEVLDHPILDFFYYMLTEILPSALVLFILRKLPPKRVSAQYHPIN 286
           SLEVLDHPILDFFYYMLTEILPSALVLFILRKLPPKRVSAQYHPIN
Sbjct: 241 SLEVLDHPILDFFYYMLTEILPSALVLFILRKLPPKRVSAQYHPIN 286



>Os03g0120300 Protein of unknown function DUF1084 family protein
          Length = 281

 Score =  275 bits (702), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 134/269 (49%), Positives = 175/269 (65%)

Query: 18  FWEEVNESPAWQDGXXXXXXXXXXXXXXXXXIQLIRIQRRVPEFGWTTQKVFHLMNFLVN 77
           +W +VN SP WQD                  +QLIRI+ RVPE+GWTTQKVFH MNF+VN
Sbjct: 13  WWNDVNNSPMWQDRSFHALATLYGAVSFVALVQLIRIECRVPEYGWTTQKVFHFMNFIVN 72

Query: 78  GVRAXXXXXXXXXXXXSAKVYKXXXXXXXXXXFFSTYTLLVLFWAEIYHQARSLPTDKLR 137
           GVR+              +V++          FF+TY LLVLFWAEIY+QAR++ TD LR
Sbjct: 73  GVRSIVFVLRRDVQLVQPEVFQHVLIDFPGLAFFTTYALLVLFWAEIYYQARAMSTDGLR 132

Query: 138 IIYIAVNAIIYTIQVCIWVYLGINDNPLVELXXXXXXXXXXXXALLGFSVYGGRLFFLLR 197
             +  +N ++Y IQ+ +W+ L       + +            A LGF +YGGRLF +L+
Sbjct: 133 PAFYTINGVVYAIQIILWMALWWKPVRAMVILSKMFFAATSLFAALGFLLYGGRLFLMLQ 192

Query: 198 RFPIESKGRKKKLYEVGTVTAICCACFLIRCIVVAISAFDSDVSLEVLDHPILDFFYYML 257
           RFP+ESKGR+KKL EVG VT IC + FLIRC+++ ++AFD +  L+VL+HPIL+FFYY+L
Sbjct: 193 RFPVESKGRRKKLNEVGYVTTICFSGFLIRCVMMCLNAFDKEADLDVLNHPILNFFYYLL 252

Query: 258 TEILPSALVLFILRKLPPKRVSAQYHPIN 286
            EI+PSALVLFILRKLPPKR   QYHPI+
Sbjct: 253 VEIVPSALVLFILRKLPPKRGITQYHPIH 281



>Os10g0537500 Protein of unknown function DUF1084 family protein
          Length = 340

 Score =  274 bits (701), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 135/269 (50%), Positives = 174/269 (64%)

Query: 18  FWEEVNESPAWQDGXXXXXXXXXXXXXXXXXIQLIRIQRRVPEFGWTTQKVFHLMNFLVN 77
           +W +VNESP WQD                  +QLIRI+ RVPE+GWTTQKVFH +NFLVN
Sbjct: 72  WWRDVNESPVWQDRIFHVLAALYGFVSAIALVQLIRIECRVPEYGWTTQKVFHFLNFLVN 131

Query: 78  GVRAXXXXXXXXXXXXSAKVYKXXXXXXXXXXFFSTYTLLVLFWAEIYHQARSLPTDKLR 137
           GVR+              ++ +          FF+TY LLVLFWAEIY+QAR++ TD LR
Sbjct: 132 GVRSIVFVLRRNVQLIHPEILQHVLLDMPGLAFFTTYALLVLFWAEIYYQARAMSTDGLR 191

Query: 138 IIYIAVNAIIYTIQVCIWVYLGINDNPLVELXXXXXXXXXXXXALLGFSVYGGRLFFLLR 197
             +  +NA+IY IQ+ +W+ L      ++ +            A  GF +YGGRLF +L+
Sbjct: 192 PTFYWINAVIYAIQIILWMVLWWKPVRVMIILSKMFFAGVSLFAAFGFLLYGGRLFLMLQ 251

Query: 198 RFPIESKGRKKKLYEVGTVTAICCACFLIRCIVVAISAFDSDVSLEVLDHPILDFFYYML 257
           RFP+ESKGR+KKL EVG VT IC  CFLIRC+++ ++ FD    L+VL+HPIL+FFYY+L
Sbjct: 252 RFPVESKGRRKKLQEVGYVTTICFTCFLIRCVMMCLNTFDKAADLDVLNHPILNFFYYLL 311

Query: 258 TEILPSALVLFILRKLPPKRVSAQYHPIN 286
            EI+PSALVLFILRKLPPKR   QYHPI+
Sbjct: 312 VEIVPSALVLFILRKLPPKRGITQYHPIH 340



>Os02g0683900 Protein of unknown function DUF1084 family protein
          Length = 284

 Score =  270 bits (689), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 133/270 (49%), Positives = 169/270 (62%)

Query: 17  GFWEEVNESPAWQDGXXXXXXXXXXXXXXXXXIQLIRIQRRVPEFGWTTQKVFHLMNFLV 76
           G+W+ VN S AWQDG                 IQ++RIQ RVPE+GWTTQKVF L+NF+V
Sbjct: 13  GWWDLVNGSTAWQDGIFLSLAALYGLVAASSFIQVVRIQYRVPEYGWTTQKVFQLLNFIV 72

Query: 77  NGVRAXXXXXXXXXXXXSAKVYKXXXXXXXXXXFFSTYTLLVLFWAEIYHQARSLPTDKL 136
           NG R             + ++++          FF+TY +L LFWAEI +QAR L T+ L
Sbjct: 73  NGARCSIFAVRRQVQQVNPEIFQHVILDLPGLAFFTTYAMLALFWAEISYQARGLETEGL 132

Query: 137 RIIYIAVNAIIYTIQVCIWVYLGINDNPLVELXXXXXXXXXXXXALLGFSVYGGRLFFLL 196
           R  +  +N +IY IQV +W  L  N NP + +            A LGF +YGGRLFF+L
Sbjct: 133 RSGFYTINGVIYVIQVLLWALLWHNPNPSMIVLSKLFIAGLSFSAALGFLLYGGRLFFML 192

Query: 197 RRFPIESKGRKKKLYEVGTVTAICCACFLIRCIVVAISAFDSDVSLEVLDHPILDFFYYM 256
           +RFPIESKGR+KKL EVG V  IC  CFL RCI++   AFD    L+VLDHPIL+F YY+
Sbjct: 193 KRFPIESKGRQKKLREVGRVATICFLCFLARCIMMCFDAFDKKADLDVLDHPILNFIYYL 252

Query: 257 LTEILPSALVLFILRKLPPKRVSAQYHPIN 286
           + EILPS+LVLFILR++P K   AQYHP+N
Sbjct: 253 IVEILPSSLVLFILRRIPSKLRLAQYHPLN 282



>Os03g0565600 Protein of unknown function DUF1084 family protein
          Length = 56

 Score =  106 bits (265), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 51/55 (92%), Positives = 54/55 (98%)

Query: 231 VAISAFDSDVSLEVLDHPILDFFYYMLTEILPSALVLFILRKLPPKRVSAQYHPI 285
           VA+S+FD D+SLEVLDHPILDFFYYMLTEILPSALVLFILRKLPPKRVSAQYHPI
Sbjct: 1   VAMSSFDPDLSLEVLDHPILDFFYYMLTEILPSALVLFILRKLPPKRVSAQYHPI 55



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.331    0.145    0.459 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 7,095,590
Number of extensions: 215962
Number of successful extensions: 428
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 419
Number of HSP's successfully gapped: 5
Length of query: 286
Length of database: 17,035,801
Length adjustment: 100
Effective length of query: 186
Effective length of database: 11,814,401
Effective search space: 2197478586
Effective search space used: 2197478586
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 155 (64.3 bits)