Os02g0683900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF1084 family protein.
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Os02g0683900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF1084 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 62.29 | 0.371 | 10.3 | -1.46 | 0.309 | -0.871 | 1.03 | -0.387 | -0.591 | 5.99 | 50.9 | 1438 | -- | -- |
| 62.55 | 0.368 | 10.3 | -1.49 | 0.312 | -0.881 | 1.07 | -- | -0.596 | 5.91 | 50.73 | 1448 | -- | -- |
| 64.52 | 0.374 | 10.3 | -1.43 | 0.297 | -0.894 | -- | -0.59 | -0.59 | 7.51 | 51 | 1334 | -- | -- |
| 64.97 | 0.375 | 10.3 | -1.51 | 0.301 | -0.926 | -- | -- | -0.602 | 7.09 | 49 | 1378 | -- | -- |
| 69.35 | 0.388 | 10.3 | -1.42 | -- | -0.897 | -- | -0.534 | -0.594 | -- | 50.77 | 1362 | -- | -- |
| 83.22 | 0.428 | 10.3 | -1.46 | 0.334 | -- | 1.15 | -- | -0.56 | 5.65 | -- | -- | -- | -- |
| 86.27 | 0.435 | 10.3 | -1.45 | 0.346 | -- | -- | -- | -0.564 | 6.24 | -- | -- | -- | -- |
| 69.71 | 0.389 | 10.4 | -1.5 | -- | -0.952 | -- | -- | -0.6 | -- | 50 | 1372 | -- | -- |
| 119.71 | 0.51 | 10.3 | -- | 0.616 | -1.33 | -- | -- | -0.61 | 6.65 | 78 | 1988 | -- | -- |
| 92.47 | 0.449 | 10.3 | -1.44 | -- | -- | -- | -- | -0.556 | -- | -- | -- | -- | -- |
| 141.97 | 0.557 | 10.3 | -- | 0.326 | -- | -- | -- | -0.402 | 6.48 | -- | -- | -- | -- |
| 123.46 | 0.518 | 10.3 | -- | -- | -1.31 | -- | -- | -0.568 | -- | 80 | 1390 | -- | -- |
| 147.5 | 0.567 | 10.3 | -- | -- | -- | -- | -- | -0.396 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 62.05 | humidity | 50 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 6 | 62.21 | humidity | 50 | 1440 | > th | dose dependent | rect. | 16 | 23 |
| 7 | 62.22 | humidity | 50 | 1440 | > th | dose dependent | rect. | 11 | 23 |
| 9 | 62.26 | humidity | 90 | 1440 | < th | dose dependent | rect. | 14 | 20 |
| 10 | 62.26 | humidity | 50 | 1440 | > th | dose dependent | rect. | 6 | 22 |
| 11 | 62.26 | humidity | 50 | 1440 | > th | dose dependent | rect. | 2 | 23 |
| 18 | 62.28 | humidity | 80 | 1440 | < th | dose independent | rect. | 6 | 15 |
| 22 | 62.28 | humidity | 50 | 1440 | > th | dose dependent | rect. | 9 | 23 |
| 27 | 62.30 | humidity | 80 | 1440 | > th | dose independent | rect. | 6 | 16 |
| 28 | 62.30 | humidity | 50 | 1440 | > th | dose dependent | no | NA | NA |
| 40 | 62.33 | humidity | 50 | 1440 | > th | dose dependent | rect. | 20 | 23 |
| 44 | 62.34 | humidity | 50 | 1440 | > th | dose dependent | rect. | 22 | 23 |
| 152 | 62.76 | humidity | 90 | 1440 | < th | dose dependent | rect. | 11 | 23 |
| 189 | 62.84 | humidity | 50 | 1440 | > th | dose dependent | sin | 17 | NA |
| 205 | 62.87 | humidity | 90 | 1440 | < th | dose dependent | no | NA | NA |
| 212 | 62.87 | humidity | 90 | 1440 | < th | dose dependent | rect. | 1 | 23 |
| 214 | 62.87 | humidity | 90 | 1440 | < th | dose dependent | rect. | 5 | 23 |
| 241 | 62.93 | humidity | 80 | 1440 | < th | dose independent | sin | 1 | NA |
| 263 | 62.95 | humidity | 90 | 1440 | < th | dose dependent | rect. | 20 | 23 |
| 270 | 62.96 | humidity | 90 | 1440 | < th | dose dependent | rect. | 22 | 23 |
| 342 | 63.11 | humidity | 80 | 1440 | < th | dose independent | rect. | 6 | 9 |
| 350 | 63.13 | humidity | 50 | 1440 | > th | dose dependent | rect. | 13 | 14 |
| 398 | 63.21 | humidity | 80 | 1440 | > th | dose independent | sin | 1 | NA |
| 436 | 63.28 | humidity | 90 | 1440 | < th | dose dependent | sin | 16 | NA |
| 544 | 63.45 | humidity | 80 | 1440 | < th | dose dependent | sin | 12 | NA |
| 577 | 63.50 | humidity | 90 | 1440 | < th | dose dependent | rect. | 14 | 14 |
| 643 | 63.60 | humidity | 90 | 1440 | < th | dose dependent | rect. | 15 | 10 |
| 696 | 63.69 | humidity | 80 | 1440 | > th | dose independent | rect. | 6 | 9 |
| 718 | 63.72 | humidity | 80 | 1440 | > th | dose independent | rect. | 20 | 23 |
| 775 | 63.80 | humidity | 80 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 793 | 63.83 | humidity | 80 | 1440 | > th | dose independent | rect. | 17 | 23 |
| 819 | 63.89 | humidity | 80 | 1440 | < th | dose independent | rect. | 16 | 23 |
| 846 | 63.94 | humidity | 80 | 1440 | > th | dose independent | no | NA | NA |
| 909 | 64.02 | humidity | 80 | 1440 | > th | dose independent | rect. | 13 | 23 |
| 965 | 64.12 | humidity | 80 | 1440 | < th | dose independent | no | NA | NA |
| 983 | 64.15 | humidity | 80 | 1440 | < th | dose independent | rect. | 20 | 23 |
| 993 | 64.16 | humidity | 80 | 1440 | > th | dose independent | rect. | 11 | 23 |