Os03g0120300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF1084 family protein.
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Os03g0120300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF1084 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 16.87 | 0.193 | 11.1 | -0.374 | 0.405 | 0.348 | 0.00257 | 0.121 | 0.0904 | 1.94 | 20.71 | 1263 | -- | -- |
| 16.88 | 0.191 | 11.1 | -0.408 | 0.405 | 0.351 | 0.00951 | -- | 0.0824 | 1.95 | 20.9 | 1264 | -- | -- |
| 16.87 | 0.191 | 11.1 | -0.374 | 0.405 | 0.348 | -- | 0.121 | 0.0904 | 1.94 | 20.7 | 1263 | -- | -- |
| 16.88 | 0.191 | 11.1 | -0.409 | 0.404 | 0.354 | -- | -- | 0.0807 | 1.95 | 20.9 | 1261 | -- | -- |
| 25.52 | 0.235 | 11.1 | -0.492 | -- | 0.508 | -- | -0.251 | 0.0531 | -- | 22.51 | 1109 | -- | -- |
| 20.75 | 0.214 | 11.1 | -0.285 | 0.456 | -- | 0.0543 | -- | 0.161 | 1.92 | -- | -- | -- | -- |
| 20.76 | 0.213 | 11.1 | -0.287 | 0.456 | -- | -- | -- | 0.161 | 1.91 | -- | -- | -- | -- |
| 25.51 | 0.235 | 11.1 | -0.436 | -- | 0.508 | -- | -- | 0.059 | -- | 20.78 | 1097 | -- | -- |
| 20.88 | 0.213 | 11.1 | -- | 0.403 | 0.245 | -- | -- | 0.141 | 1.89 | 20.77 | 1221 | -- | -- |
| 33.29 | 0.27 | 11.1 | -0.268 | -- | -- | -- | -- | 0.171 | -- | -- | -- | -- | -- |
| 22.92 | 0.224 | 11.1 | -- | 0.45 | -- | -- | -- | 0.193 | 1.9 | -- | -- | -- | -- |
| 29.86 | 0.255 | 11.1 | -- | -- | 0.388 | -- | -- | 0.154 | -- | 23.75 | 1111 | -- | -- |
| 35.18 | 0.277 | 11.1 | -- | -- | -- | -- | -- | 0.201 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 16.31 | temperature | 20 | 720 | > th | dose dependent | rect. | 16 | 16 |
| 5 | 16.37 | temperature | 10 | 270 | > th | dose dependent | rect. | 15 | 15 |
| 13 | 16.42 | temperature | 20 | 720 | > th | dose dependent | sin | 13 | NA |
| 57 | 16.59 | temperature | 30 | 720 | < th | dose dependent | rect. | 16 | 15 |
| 63 | 16.61 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 4 |
| 64 | 16.61 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 4 |
| 76 | 16.62 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 10 |
| 104 | 16.65 | temperature | 20 | 10 | > th | dose dependent | rect. | 16 | 17 |
| 106 | 16.66 | temperature | 30 | 720 | < th | dose dependent | sin | 13 | NA |
| 107 | 16.66 | temperature | 20 | 1440 | > th | dose dependent | rect. | 19 | 1 |
| 198 | 16.73 | temperature | 30 | 1440 | < th | dose dependent | rect. | 19 | 1 |
| 213 | 16.74 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 3 |
| 249 | 16.76 | temperature | 15 | 270 | > th | dose dependent | rect. | 24 | 8 |
| 287 | 16.79 | temperature | 20 | 270 | > th | dose independent | rect. | 2 | 17 |
| 734 | 17.01 | temperature | 20 | 10 | > th | dose independent | rect. | 3 | 17 |
| 774 | 17.02 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 807 | 17.02 | temperature | 20 | 1440 | > th | dose dependent | rect. | 1 | 23 |
| 875 | 17.04 | temperature | 20 | 1440 | > th | dose dependent | rect. | 19 | 23 |