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Os07g0102400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein of unknown function DUF1084 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.6 (0.0149) R2 : 0.723
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.33 (0.0386) R2dC : 0.727 R2C : 0.721
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0512 (0.0314) R2dN8 : 0.00209 R2N8 : -0.00417
σ : 0.281
deviance : 36.14
__
_____
C
peak time of C : 7.4
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
30.44 0.259 12.6 -0.0946 1.29 0.316 -0.827 -0.13 -0.0504 6.59 17.09 7 -- --
30.54 0.257 12.6 -0.102 1.28 0.316 -0.855 -- -0.0502 6.59 17.12 6 -- --
32.14 0.264 12.6 -0.101 1.28 0.309 -- -0.154 -0.0492 6.6 17.12 6 -- --
32.41 0.265 12.6 -0.108 1.28 0.308 -- -- -0.0468 6.6 17.12 6 -- --
106.75 0.481 12.6 0.014 -- 0.446 -- -0.479 -0.00853 -- 4.85 3 -- --
34.35 0.275 12.6 -0.0779 1.33 -- -0.758 -- -0.0634 7.36 -- -- -- --
35.91 0.281 12.6 -0.0943 1.33 -- -- -- -0.0617 7.39 -- -- -- --
107.76 0.483 12.6 -0.0147 -- 0.467 -- -- -0.0269 -- 4.788 3 -- --
32.73 0.266 12.6 -- 1.28 0.304 -- -- -0.0392 6.63 16.85 6 -- --
130.32 0.533 12.6 -0.0727 -- -- -- -- -0.04 -- -- -- -- --
36.14 0.281 12.6 -- 1.33 -- -- -- -0.0512 7.4 -- -- -- --
107.76 0.483 12.6 -- -- 0.457 -- -- -0.0354 -- 4.783 3 -- --
130.46 0.533 12.6 -- -- -- -- -- -0.032 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 23.70 temperature 15.0 90 > th dose dependent rect. 15 18
3 23.98 temperature 20.0 90 > th dose independent rect. 15 18
6 24.70 temperature 10.0 270 > th dose dependent rect. 13 19
12 24.97 temperature 20.0 270 > th dose independent rect. 14 3
24 25.23 temperature 20.0 270 > th dose independent rect. 13 5
31 25.35 humidity 90.0 270 < th dose independent rect. 14 3
40 25.45 temperature 10.0 270 > th dose dependent rect. 13 13
42 25.46 wind 1.0 90 > th dose dependent rect. 15 4
52 25.61 temperature 20.0 270 > th dose independent rect. 15 1
64 25.68 humidity 90.0 270 < th dose independent rect. 13 5
86 25.87 wind 1.0 270 > th dose dependent rect. 13 5
92 25.92 atmosphere 1015.0 270 < th dose dependent rect. 14 3
106 26.06 temperature 10.0 270 > th dose dependent rect. 14 3
113 26.10 wind 3.0 90 > th dose independent rect. 15 4
114 26.10 atmosphere 995.0 270 > th dose independent rect. 17 21
121 26.16 wind 9.0 270 < th dose independent rect. 17 21
135 26.25 temperature 10.0 270 > th dose dependent rect. 22 10
136 26.26 temperature 10.0 270 > th dose independent rect. 14 3
138 26.26 atmosphere 1010.0 270 < th dose independent rect. 14 3
141 26.26 temperature 10.0 270 > th dose independent rect. 17 21
142 26.29 precipitation 0.1 270 < th dose independent rect. 14 3
144 26.29 precipitation 0.1 270 < th dose dependent rect. 14 3
151 26.31 temperature 10.0 90 > th dose dependent rect. 9 6
156 26.35 atmosphere 1015.0 270 < th dose dependent rect. 13 5
158 26.36 radiation 40.0 90 < th dose independent rect. 15 4
162 26.40 atmosphere 995.0 90 > th dose independent rect. 19 20
163 26.40 humidity 50.0 270 > th dose independent rect. 17 21
165 26.40 wind 1.0 10 > th dose dependent rect. 15 5
170 26.41 temperature 10.0 90 > th dose independent rect. 19 20
171 26.41 temperature 10.0 270 > th dose dependent rect. 13 5
172 26.42 wind 1.0 270 > th dose independent rect. 13 5
177 26.44 wind 9.0 270 < th dose independent rect. 14 3
181 26.45 wind 9.0 90 < th dose independent rect. 19 20
195 26.53 atmosphere 1015.0 90 < th dose independent rect. 15 18
196 26.53 temperature 10.0 270 > th dose dependent rect. 15 1
205 26.57 humidity 50.0 90 > th dose independent rect. 19 20
221 26.61 precipitation 0.1 90 < th dose independent rect. 19 20
222 26.61 precipitation 0.1 90 < th dose dependent rect. 19 20
225 26.64 temperature 10.0 270 > th dose independent rect. 13 5
227 26.64 atmosphere 1010.0 270 < th dose independent rect. 13 5
231 26.64 precipitation 0.1 270 < th dose independent rect. 17 21
233 26.64 precipitation 0.1 270 < th dose dependent rect. 17 21
258 26.73 atmosphere 1015.0 270 < th dose independent rect. 22 11
259 26.74 precipitation 0.1 270 < th dose independent rect. 13 5
262 26.74 precipitation 0.1 270 < th dose dependent rect. 13 5
263 26.75 temperature 20.0 90 > th dose independent rect. 15 14
270 26.78 wind 1.0 270 > th dose independent rect. 15 1
274 26.79 precipitation 0.1 270 < th dose independent rect. 15 1
275 26.79 precipitation 0.1 270 < th dose dependent rect. 15 1
280 26.80 temperature 10.0 270 > th dose independent rect. 15 1
282 26.80 atmosphere 1010.0 270 < th dose independent rect. 15 1
284 26.80 temperature 10.0 270 > th dose independent rect. 16 23
286 26.81 radiation 40.0 270 < th dose independent rect. 15 1
295 26.84 temperature 20.0 270 > th dose independent rect. 13 14
301 26.85 atmosphere 995.0 90 > th dose independent rect. 15 4
303 26.85 wind 9.0 270 < th dose independent rect. 13 5
307 26.86 wind 9.0 270 < th dose independent rect. 16 23
310 26.87 temperature 10.0 10 > th dose dependent rect. 15 5
314 26.88 radiation 1.0 90 > th dose independent rect. 9 6
351 26.99 radiation 1.0 270 > th dose independent rect. 14 3
354 27.00 wind 9.0 270 < th dose independent rect. 15 1
384 27.09 precipitation 0.1 270 < th dose independent rect. 23 10
387 27.09 precipitation 0.1 270 < th dose dependent rect. 23 10
398 27.12 temperature 10.0 270 > th dose dependent rect. 9 3
409 27.16 wind 9.0 270 < th dose independent rect. 9 14
421 27.18 atmosphere 1015.0 270 < th dose independent rect. 13 20
425 27.18 atmosphere 1015.0 10 < th dose dependent rect. 15 5
436 27.23 atmosphere 995.0 90 > th dose independent rect. 9 6
441 27.24 precipitation 0.1 10 < th dose independent rect. 15 5
442 27.24 temperature 10.0 90 > th dose independent rect. 9 6
443 27.24 atmosphere 1015.0 90 < th dose independent rect. 9 6
446 27.24 temperature 10.0 90 > th dose independent rect. 15 18
447 27.24 precipitation 0.1 10 < th dose dependent rect. 15 5
448 27.25 temperature 15.0 10 > th dose dependent rect. 10 5
451 27.26 precipitation 0.1 90 < th dose independent rect. 9 6
452 27.26 radiation 1.0 270 > th dose independent rect. 13 18
455 27.26 precipitation 0.1 90 < th dose dependent rect. 9 6
462 27.27 wind 9.0 90 < th dose independent rect. 9 6
465 27.27 radiation 40.0 90 < th dose independent rect. 15 18
468 27.27 temperature 30.0 270 < th dose dependent rect. 17 10
471 27.29 wind 1.0 10 > th dose independent rect. 15 5
472 27.29 radiation 40.0 10 < th dose independent rect. 15 5
473 27.29 wind 9.0 270 < th dose independent rect. 23 10
474 27.29 temperature 10.0 270 > th dose independent rect. 23 10
475 27.29 humidity 50.0 270 > th dose independent rect. 23 10
476 27.29 atmosphere 995.0 270 > th dose independent rect. 23 10
477 27.29 temperature 10.0 270 > th dose independent rect. 9 14
487 27.31 temperature 10.0 10 > th dose independent rect. 15 5
489 27.31 atmosphere 1010.0 10 < th dose independent rect. 15 5
491 27.31 temperature 10.0 10 > th dose independent rect. 20 19
492 27.31 atmosphere 995.0 10 > th dose independent rect. 20 19
497 27.32 temperature 20.0 90 > th dose independent rect. 23 10
508 27.33 wind 9.0 10 < th dose independent rect. 20 19
533 27.38 humidity 50.0 90 > th dose independent rect. 9 6
534 27.38 precipitation 0.1 90 < th dose independent rect. 15 18
539 27.38 precipitation 0.1 90 < th dose dependent rect. 15 18
540 27.39 temperature 30.0 270 < th dose independent rect. 23 10
554 27.43 atmosphere 995.0 270 > th dose independent rect. 15 1
596 27.49 wind 1.0 90 > th dose independent rect. 9 6
598 27.49 wind 9.0 90 < th dose independent rect. 15 18
601 27.49 temperature 30.0 10 < th dose dependent rect. 19 11
613 27.51 temperature 10.0 1440 > th dose independent rect. 16 5
617 27.51 temperature 10.0 1440 > th dose independent rect. 21 19
620 27.51 humidity 50.0 10 > th dose independent rect. 20 19
622 27.52 wind 1.0 270 > th dose independent rect. 18 19
630 27.53 radiation 40.0 270 < th dose independent rect. 23 10
650 27.56 radiation 1.0 270 > th dose independent rect. 9 4
682 27.60 atmosphere 1015.0 10 < th dose independent rect. 15 19
721 27.66 humidity 50.0 270 > th dose independent rect. 14 3
725 27.66 precipitation 0.1 270 < th dose independent rect. 13 20
730 27.66 precipitation 0.1 270 < th dose dependent rect. 13 20
734 27.67 radiation 1.0 270 > th dose independent rect. 13 6
806 27.74 wind 1.0 270 > th dose independent rect. 17 21
813 27.75 atmosphere 995.0 90 > th dose independent rect. 15 18
824 27.76 humidity 50.0 270 > th dose independent rect. 9 4
839 27.78 atmosphere 995.0 10 > th dose independent rect. 15 5
870 27.82 radiation 40.0 10 < th dose dependent rect. 14 6
878 27.83 radiation 40.0 90 < th dose dependent rect. 15 4
904 27.85 wind 9.0 270 < th dose independent rect. 9 4
905 27.85 precipitation 0.1 270 < th dose independent rect. 9 14
908 27.85 precipitation 0.1 270 < th dose dependent rect. 9 14
912 27.86 precipitation 0.1 270 < th dose independent rect. 9 4
917 27.86 precipitation 0.1 270 < th dose dependent rect. 9 4
929 27.88 temperature 10.0 270 > th dose independent rect. 9 4
931 27.88 atmosphere 995.0 270 > th dose independent rect. 9 4
932 27.88 atmosphere 1015.0 270 < th dose independent rect. 9 4
934 27.88 temperature 10.0 270 > th dose independent rect. 13 20
958 27.91 humidity 90.0 90 < th dose independent rect. 9 6
972 27.93 atmosphere 995.0 270 > th dose independent rect. 9 14