BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0665000 Os06g0665000|AK069711
(358 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os06g0665000 Protein of unknown function DUF284, transmembr... 618 e-177
Os02g0173800 Protein of unknown function DUF284, transmembr... 482 e-136
Os03g0120100 Protein of unknown function DUF284, transmembr... 382 e-106
Os09g0560600 Protein of unknown function DUF284, transmembr... 378 e-105
Os05g0529900 Protein of unknown function DUF284, transmembr... 372 e-103
Os03g0785500 Protein of unknown function DUF284, transmembr... 364 e-101
>Os06g0665000 Protein of unknown function DUF284, transmembrane eukaryotic family
protein
Length = 358
Score = 618 bits (1593), Expect = e-177, Method: Compositional matrix adjust.
Identities = 304/358 (84%), Positives = 304/358 (84%)
Query: 1 MNNHXXXXXXXXXXXXXXXXXXXXXXXXRRNTKMPKYSKFTQQELPACKPILTPKWVVSX 60
MNNH RRNTKMPKYSKFTQQELPACKPILTPKWVVS
Sbjct: 1 MNNHAAGGSTSNGGSGVDGDGGGGGGAARRNTKMPKYSKFTQQELPACKPILTPKWVVSV 60
Query: 61 XXXXXXXXXXXXXXXXXAAQNVVEIVDRYDDACVPANMTDNKLAYIQNPNISKECTRTLT 120
AAQNVVEIVDRYDDACVPANMTDNKLAYIQNPNISKECTRTLT
Sbjct: 61 FFLVGVIFVPVGVVSLLAAQNVVEIVDRYDDACVPANMTDNKLAYIQNPNISKECTRTLT 120
Query: 121 ITEDMNQPIFVYYQLDNFYQNHRRYVKSRNDGQLRDAAKANQTSACEPEKTTADGKPIVP 180
ITEDMNQPIFVYYQLDNFYQNHRRYVKSRNDGQLRDAAKANQTSACEPEKTTADGKPIVP
Sbjct: 121 ITEDMNQPIFVYYQLDNFYQNHRRYVKSRNDGQLRDAAKANQTSACEPEKTTADGKPIVP 180
Query: 181 CGLIAWSLFNDTYSFTRGNENLTVDKKDISWKSDREHKFGKNVYPSNFQNGLLKGGGTLD 240
CGLIAWSLFNDTYSFTRGNENLTVDKKDISWKSDREHKFGKNVYPSNFQNGLLKGGGTLD
Sbjct: 181 CGLIAWSLFNDTYSFTRGNENLTVDKKDISWKSDREHKFGKNVYPSNFQNGLLKGGGTLD 240
Query: 241 PAIPLSEQEDLIVWMRTAALPTFRKLYGRIYVDLKKNDTITVKLSNNYNTYNFGGKKKLV 300
PAIPLSEQEDLIVWMRTAALPTFRKLYGRIYVDLKKNDTITVKLSNNYNTYNFGGKKKLV
Sbjct: 241 PAIPLSEQEDLIVWMRTAALPTFRKLYGRIYVDLKKNDTITVKLSNNYNTYNFGGKKKLV 300
Query: 301 LSTATWLGGKNDFLGFAYVIVGGVCXXXXXXXXXXXXIKPRKLGDHNYLSWNRHPGGR 358
LSTATWLGGKNDFLGFAYVIVGGVC IKPRKLGDHNYLSWNRHPGGR
Sbjct: 301 LSTATWLGGKNDFLGFAYVIVGGVCFFLAFAFTLLYLIKPRKLGDHNYLSWNRHPGGR 358
>Os02g0173800 Protein of unknown function DUF284, transmembrane eukaryotic family
protein
Length = 350
Score = 482 bits (1241), Expect = e-136, Method: Compositional matrix adjust.
Identities = 236/330 (71%), Positives = 262/330 (79%), Gaps = 2/330 (0%)
Query: 29 RRNTKMPKYSKFTQQELPACKPILTPKWVVSXXXXXXXXXXXXXXXXXXAAQNVVEIVDR 88
RRNT+ PKYSKFTQQELPACKPILTPKWV+S A++ VVEIVDR
Sbjct: 23 RRNTRKPKYSKFTQQELPACKPILTPKWVISVFVLVGVIFVPIGLVSLKASRKVVEIVDR 82
Query: 89 YDDACVPANMTDNKLAYIQNPNISKECTRTLTITEDMNQPIFVYYQLDNFYQNHRRYVKS 148
YDDACVPAN TD KLAYIQNP ISK C RTL + +DM+ PIFVYYQLDNFYQNHRRYVKS
Sbjct: 83 YDDACVPANTTD-KLAYIQNPTISKNCRRTLKVPKDMDAPIFVYYQLDNFYQNHRRYVKS 141
Query: 149 RNDGQLRDAAKANQTSACEPEKTTADGKPIVPCGLIAWSLFNDTYSFTRGNENLTVDKKD 208
R+D QLRD KAN TS C+PE TA+G IVPCGLIAWS+FNDTY F R ++NL VDKK+
Sbjct: 142 RSDAQLRDPKKANDTSTCDPE-GTANGMAIVPCGLIAWSIFNDTYGFVRNSKNLPVDKKN 200
Query: 209 ISWKSDREHKFGKNVYPSNFQNGLLKGGGTLDPAIPLSEQEDLIVWMRTAALPTFRKLYG 268
ISWKSDREHKFG++V+P NFQNG L GG TLDP LS+QEDLIVWMRTAALPTFRKLYG
Sbjct: 201 ISWKSDREHKFGRDVFPKNFQNGSLIGGKTLDPNKSLSKQEDLIVWMRTAALPTFRKLYG 260
Query: 269 RIYVDLKKNDTITVKLSNNYNTYNFGGKKKLVLSTATWLGGKNDFLGFAYVIVGGVCXXX 328
RI+ DLKK DTITV L NNYNTY+F GKKKLVLST+TWLGGKNDFLG AY+ VGG+C
Sbjct: 261 RIHTDLKKGDTITVTLENNYNTYSFSGKKKLVLSTSTWLGGKNDFLGLAYLSVGGLCFFL 320
Query: 329 XXXXXXXXXIKPRKLGDHNYLSWNRHPGGR 358
IKPRK+GD+NYLSWNR+P GR
Sbjct: 321 AFAFTLLYLIKPRKMGDNNYLSWNRNPAGR 350
>Os03g0120100 Protein of unknown function DUF284, transmembrane eukaryotic family
protein
Length = 340
Score = 382 bits (982), Expect = e-106, Method: Compositional matrix adjust.
Identities = 184/326 (56%), Positives = 229/326 (70%), Gaps = 4/326 (1%)
Query: 29 RRNTKMPKYSKFTQQELPACKPILTPKWVVSXXXXXXXXXXXXXXXXXXAAQNVVEIVDR 88
+++ PKYSKFTQQELPACKP+LTP VV+ A+Q +VE+VDR
Sbjct: 11 QKSNNKPKYSKFTQQELPACKPLLTPGIVVATFLLIGIIFVPIGLASLSASQEIVELVDR 70
Query: 89 YDDACVPANMTDNKLAYIQNPNISKECTRTLTITEDMNQPIFVYYQLDNFYQNHRRYVKS 148
YD CV T +K+ +IQN + K CTRTLT+ + M PI +YYQ+ +FYQNHRRYVKS
Sbjct: 71 YDTNCVS---TLDKVGFIQNTDTDKTCTRTLTVPKHMKSPIQIYYQIGDFYQNHRRYVKS 127
Query: 149 RNDGQLRDAAKANQTSACEPEKTTADGKPIVPCGLIAWSLFNDTYSFTRGNENLTVDKKD 208
R+D QLR + T C+PE T DG PI+PCGLIAWSLFNDTY+ + + + V+KKD
Sbjct: 128 RSDKQLRYKNAVHLTKDCDPEGNTVDGAPIIPCGLIAWSLFNDTYTISVNKKAIEVNKKD 187
Query: 209 ISWKSDREHKFGKNVYPSNFQNGLLKGGGTLDPAIPLSEQEDLIVWMRTAALPTFRKLYG 268
I+WKSD+ KFG ++YPSNFQ G L GG L+ +IPLSEQEDLIVWMRTAALPTFRKLYG
Sbjct: 188 IAWKSDKTDKFGSDIYPSNFQKGSLIGGAKLNESIPLSEQEDLIVWMRTAALPTFRKLYG 247
Query: 269 RIYVDLKKNDTITVKLSNNYNTYNFGGKKKLVLSTATWLGGKNDFLGFAYVIVGGVCXXX 328
RI D+ ND +TV + NNYNTY+FGG K LVLST +W+GGKN+F+G AY+ +GG+C
Sbjct: 248 RIETDIMANDQLTVVIQNNYNTYSFGGSKALVLSTTSWIGGKNNFIGVAYLTIGGLCIFL 307
Query: 329 XXXXXXXX-XIKPRKLGDHNYLSWNR 353
+KPR LGD +YLSWNR
Sbjct: 308 AVGFVVLLYMVKPRTLGDPSYLSWNR 333
>Os09g0560600 Protein of unknown function DUF284, transmembrane eukaryotic family
protein
Length = 351
Score = 378 bits (970), Expect = e-105, Method: Compositional matrix adjust.
Identities = 185/290 (63%), Positives = 212/290 (73%), Gaps = 3/290 (1%)
Query: 35 PKYSKFTQQELPACKPILTPKWVVSXXXXXXXXXXXXXXXXXXAAQNVVEIVDRYDDACV 94
PKY +FTQQEL ACKPIL P+ V+ A+ VVE+VDRYD CV
Sbjct: 28 PKYHRFTQQELQACKPILIPQTVILVLVFVGLIFIPIGLACIAASNKVVELVDRYDTKCV 87
Query: 95 PANMTDNKLAYIQNPNISKECTRTLTITEDMNQPIFVYYQLDNFYQNHRRYVKSRNDGQL 154
P NM NK+A+IQN +I K CTR + +DM +PI++YYQLD FYQNHRRYVKS ND QL
Sbjct: 88 PRNMLRNKVAFIQNSSIDKTCTRVFKVPKDMKKPIYIYYQLDKFYQNHRRYVKSLNDMQL 147
Query: 155 RDAAKANQTSACEPEKTTADGKPIVPCGLIAWSLFNDTYSFTRG--NENLTVDKKDISWK 212
R+ K T C PE TA+G+PIVPCGLIAWSLFNDTYSFTRG NE L V+K ISWK
Sbjct: 148 RNPKKVADTQYCSPE-ATANGRPIVPCGLIAWSLFNDTYSFTRGHGNETLRVNKDGISWK 206
Query: 213 SDREHKFGKNVYPSNFQNGLLKGGGTLDPAIPLSEQEDLIVWMRTAALPTFRKLYGRIYV 272
S+R +FGKNVYP NFQNG L GGG L+P+ PLSEQEDLIVWMR AALPTFRKLYGRI +
Sbjct: 207 SERNRRFGKNVYPKNFQNGTLIGGGQLNPSKPLSEQEDLIVWMRIAALPTFRKLYGRIDM 266
Query: 273 DLKKNDTITVKLSNNYNTYNFGGKKKLVLSTATWLGGKNDFLGFAYVIVG 322
DL+ D + V + NNYN+Y+F GKK LVLSTA WLGGKN FLG AY IVG
Sbjct: 267 DLQAGDRVEVTMQNNYNSYSFNGKKSLVLSTAGWLGGKNAFLGRAYAIVG 316
>Os05g0529900 Protein of unknown function DUF284, transmembrane eukaryotic family
protein
Length = 325
Score = 372 bits (955), Expect = e-103, Method: Compositional matrix adjust.
Identities = 178/320 (55%), Positives = 221/320 (69%), Gaps = 3/320 (0%)
Query: 35 PKYSKFTQQELPACKPILTPKWVVSXXXXXXXXXXXXXXXXXXAAQNVVEIVDRYDDACV 94
PKYSKFTQQELPA KP+ TP V+ A+Q VVE+VD+YD CV
Sbjct: 3 PKYSKFTQQELPAWKPLYTPGIVIGAFSLIGIIFIPIGLVSIAASQEVVELVDKYDGECV 62
Query: 95 PANMTDNKLAYIQNPNISKECTRTLTITEDMNQPIFVYYQLDNFYQNHRRYVKSRNDGQL 154
AN +K+ +IQ+ K CTRT+T+ + M PI VYYQL+NFYQNHRRYVKSR+D QL
Sbjct: 63 TAN---DKVGFIQDTKTDKACTRTITVPKPMKGPIQVYYQLENFYQNHRRYVKSRSDKQL 119
Query: 155 RDAAKANQTSACEPEKTTADGKPIVPCGLIAWSLFNDTYSFTRGNENLTVDKKDISWKSD 214
R ++ C+PE + G PIVPCGLIAWSLFNDT++F+ + + V+KK+I+W SD
Sbjct: 120 RSKEFSSVIKTCDPEAISEGGAPIVPCGLIAWSLFNDTFTFSVNKKTVQVNKKNIAWSSD 179
Query: 215 REHKFGKNVYPSNFQNGLLKGGGTLDPAIPLSEQEDLIVWMRTAALPTFRKLYGRIYVDL 274
R KFG +V+P NFQ G L GGG L+ +PLSEQEDLIVWMRTAALPTFRKLYGRI D+
Sbjct: 180 RTIKFGSDVFPENFQKGGLIGGGQLNEKLPLSEQEDLIVWMRTAALPTFRKLYGRIETDI 239
Query: 275 KKNDTITVKLSNNYNTYNFGGKKKLVLSTATWLGGKNDFLGFAYVIVGGVCXXXXXXXXX 334
+D ITV + NNYNTY+FGG K LVLST +W+GGKN+F+GFAYV +G +
Sbjct: 240 MASDEITVVIQNNYNTYSFGGTKALVLSTTSWIGGKNNFIGFAYVAIGTISFLIALAFVG 299
Query: 335 XXXIKPRKLGDHNYLSWNRH 354
+KPR LGD +YLSWN+
Sbjct: 300 LNMVKPRTLGDPSYLSWNKE 319
>Os03g0785500 Protein of unknown function DUF284, transmembrane eukaryotic family
protein
Length = 351
Score = 364 bits (935), Expect = e-101, Method: Compositional matrix adjust.
Identities = 180/317 (56%), Positives = 222/317 (70%), Gaps = 2/317 (0%)
Query: 37 YSKFTQQELPACKPILTPKWVVSXXXXXXXXXXXXXXXXXXAAQNVVEIVDRYDDACVPA 96
+ +FTQQ LPA KP +TP V++ A+ +V EI RYD CVP
Sbjct: 32 FYRFTQQNLPAWKPAMTPGCVITIFLMIGVTFVPVGLVCLHASNHVAEIAHRYDIDCVPN 91
Query: 97 NMTDNKLAYIQNPNISKECTRTLTITEDMNQPIFVYYQLDNFYQNHRRYVKSRNDGQLRD 156
N+ AYI++ +ISK CT+ + + M PI+VYY+LDNFYQNHRRYVKSR+D QLR
Sbjct: 92 AYKRNRQAYIKDSSISKNCTQEVKVKYLMRAPIYVYYELDNFYQNHRRYVKSRSDKQLRY 151
Query: 157 AAKANQTSACEPEKTTADGKPIVPCGLIAWSLFNDTYSFTRGNENLTVDKKDISWKSDRE 216
K +S C+P + DG PIVPCGLIAWSLFNDTY FT G+ + V++K+ISWKSDRE
Sbjct: 152 GQKYTHSS-CDPIERN-DGLPIVPCGLIAWSLFNDTYGFTCGSTEIKVNRKNISWKSDRE 209
Query: 217 HKFGKNVYPSNFQNGLLKGGGTLDPAIPLSEQEDLIVWMRTAALPTFRKLYGRIYVDLKK 276
HKFGK+VYP NFQNG L GGG LDPA+PL++QEDLIVWMRTAALP FRKLYG I DL+
Sbjct: 210 HKFGKDVYPFNFQNGSLIGGGKLDPALPLNQQEDLIVWMRTAALPQFRKLYGVIEEDLQA 269
Query: 277 NDTITVKLSNNYNTYNFGGKKKLVLSTATWLGGKNDFLGFAYVIVGGVCXXXXXXXXXXX 336
++ IT+ ++NNYNTY+FGGKK L+L+T+TWLGGKNDFLG+AY+I G +
Sbjct: 270 DEIITMHIANNYNTYSFGGKKSLILTTSTWLGGKNDFLGYAYLITGSLSLFLTILFALIH 329
Query: 337 XIKPRKLGDHNYLSWNR 353
PR GD NYLSWNR
Sbjct: 330 VKNPRPHGDANYLSWNR 346
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.318 0.135 0.419
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 11,311,591
Number of extensions: 442967
Number of successful extensions: 818
Number of sequences better than 1.0e-10: 6
Number of HSP's gapped: 803
Number of HSP's successfully gapped: 6
Length of query: 358
Length of database: 17,035,801
Length adjustment: 102
Effective length of query: 256
Effective length of database: 11,709,973
Effective search space: 2997753088
Effective search space used: 2997753088
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 157 (65.1 bits)