Os05g0529900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF284, transmembrane eukaryotic family protein.
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Os05g0529900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF284, transmembrane eukaryotic family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 217.8 | 0.693 | 3.94 | -0.125 | 0.52 | 1.29 | -0.892 | 1.13 | 0.00556 | 9.87 | 21.99 | 1043 | -- | -- |
| 221.1 | 0.693 | 3.91 | 0.219 | 0.515 | 1.3 | -0.592 | -- | 0.0805 | 9.77 | 22 | 1042 | -- | -- |
| 220.69 | 0.692 | 3.93 | -0.104 | 0.549 | 1.3 | -- | 1.01 | 0.0328 | 9.88 | 22 | 1080 | -- | -- |
| 222.4 | 0.695 | 3.9 | 0.191 | 0.524 | 1.26 | -- | -- | 0.0854 | 9.99 | 21.91 | 1042 | -- | -- |
| 234.86 | 0.714 | 3.93 | 0.00134 | -- | 1.38 | -- | 0.692 | 0.0668 | -- | 21.95 | 912 | -- | -- |
| 280.16 | 0.785 | 3.99 | -0.246 | 0.698 | -- | -0.613 | -- | -0.314 | 10.4 | -- | -- | -- | -- |
| 281.68 | 0.786 | 3.99 | -0.27 | 0.701 | -- | -- | -- | -0.315 | 10.4 | -- | -- | -- | -- |
| 235.96 | 0.715 | 3.91 | 0.188 | -- | 1.34 | -- | -- | 0.107 | -- | 21.94 | 855 | -- | -- |
| 223.32 | 0.696 | 3.9 | -- | 0.521 | 1.25 | -- | -- | 0.0737 | 9.92 | 21.91 | 1036 | -- | -- |
| 311.73 | 0.825 | 4.01 | -0.282 | -- | -- | -- | -- | -0.317 | -- | -- | -- | -- | -- |
| 283.6 | 0.788 | 3.98 | -- | 0.703 | -- | -- | -- | -0.285 | 10.4 | -- | -- | -- | -- |
| 236.83 | 0.717 | 3.92 | -- | -- | 1.3 | -- | -- | 0.076 | -- | 21.95 | 855 | -- | -- |
| 313.82 | 0.827 | 4 | -- | -- | -- | -- | -- | -0.286 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 216.25 | temperature | 30 | 720 | < th | dose dependent | rect. | 21 | 15 |
| 5 | 217.09 | temperature | 15 | 720 | > th | dose dependent | sin | 8 | NA |
| 8 | 217.16 | temperature | 30 | 720 | < th | dose dependent | sin | 7 | NA |
| 15 | 217.58 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 17 |
| 46 | 218.99 | temperature | 10 | 720 | > th | dose dependent | rect. | 18 | 21 |
| 114 | 220.43 | temperature | 25 | 720 | < th | dose dependent | rect. | 24 | 20 |
| 232 | 222.23 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 3 |
| 263 | 222.73 | temperature | 15 | 1440 | > th | dose dependent | rect. | 20 | 3 |
| 313 | 223.16 | temperature | 15 | 720 | > th | dose dependent | rect. | 2 | 7 |
| 334 | 223.37 | temperature | 25 | 1440 | < th | dose dependent | rect. | 19 | 6 |
| 365 | 223.63 | temperature | 15 | 1440 | > th | dose dependent | rect. | 19 | 6 |
| 509 | 224.31 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 582 | 224.62 | temperature | 30 | 1440 | < th | dose dependent | sin | 12 | NA |
| 733 | 225.22 | temperature | 25 | 720 | < th | dose dependent | rect. | 4 | 23 |
| 766 | 225.37 | radiation | 1 | 14400 | < th | dose dependent | rect. | 14 | 3 |
| 792 | 225.43 | temperature | 25 | 720 | < th | dose dependent | rect. | 6 | 23 |