BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0645600 Os06g0645600|Os06g0645600
(583 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os06g0645600 Peptidase S1 and S6, chymotrypsin/Hap domain c... 734 0.0
Os02g0799300 Conserved hypothetical protein 288 8e-78
Os04g0644000 Conserved hypothetical protein 266 5e-71
Os02g0183500 Quinonprotein alcohol dehydrogenase-like domai... 228 9e-60
Os01g0121300 Conserved hypothetical protein 205 8e-53
>Os06g0645600 Peptidase S1 and S6, chymotrypsin/Hap domain containing protein
Length = 583
Score = 734 bits (1894), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/549 (70%), Positives = 386/549 (70%)
Query: 35 TNSSSAFVLAAAQTRRKDPLRGLRYYTGGWNISDKHYLALAMRSPWCSTVLPAWFLMLTP 94
TNSSSAFVLAAAQTRRKDPLRGLRYYTGGWNISDKHYLALAMRSPWCSTVLPAWFLMLTP
Sbjct: 35 TNSSSAFVLAAAQTRRKDPLRGLRYYTGGWNISDKHYLALAMRSPWCSTVLPAWFLMLTP 94
Query: 95 SSFAMLVAARAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 154
SSFAMLVAARAQ
Sbjct: 95 SSFAMLVAARAQSVGFSAAPVFVVAAVWFASLALAAFVACCCRCCCSGAGGGNGNGGYSY 154
Query: 155 XXXIFAVSLALLLVFTAVAIIGCIVLYDGQGKFHGSTTATLRFVVNQSDGAVASLRGFSG 214
IFAVSLALLLVFTAVAIIGCIVLYDGQGKFHGSTTATLRFVVNQSDGAVASLRGFSG
Sbjct: 155 SRAIFAVSLALLLVFTAVAIIGCIVLYDGQGKFHGSTTATLRFVVNQSDGAVASLRGFSG 214
Query: 215 FIXXXXXXXXXXXTLPADLQGKXXXXXXXXXXXXXXXXXXTTTNSRKIRTALETIRTILI 274
FI TLPADLQGK TTTNSRKIRTALETIRTILI
Sbjct: 215 FIEAAKAAAVEKATLPADLQGKVDDVVRRVDASADDLAARTTTNSRKIRTALETIRTILI 274
Query: 275 XXXXXXXXXXXXXXXFSLCGLKSLVYTLVIFGWILVTATFILSGTFLLLHNAVGDTCVAM 334
FSLCGLKSLVYTLVIFGWILVTATFILSGTFLLLHNAVGDTCVAM
Sbjct: 275 VVAAVMLALAFLGLVFSLCGLKSLVYTLVIFGWILVTATFILSGTFLLLHNAVGDTCVAM 334
Query: 335 DEWVLHPQGHTALDDILPCVDAAATSDALRRSKEVNYQIVSXXXXXXXXXXXXXXXXXXX 394
DEWVLHPQGHTALDDILPCVDAAATSDALRRSKEVNYQIVS
Sbjct: 335 DEWVLHPQGHTALDDILPCVDAAATSDALRRSKEVNYQIVSVLNNLLATVANANVPASSP 394
Query: 395 XXXXXXYRQSGTPVPLLCNPYNGDLSDRXXXXXXXXXXXXXXXWRGYVCRATGAAPSSEV 454
YRQSGTPVPLLCNPYNGDLSDR WRGYVCRATGAAPSSEV
Sbjct: 395 PSPPASYRQSGTPVPLLCNPYNGDLSDRACAAGEVAAADAPRAWRGYVCRATGAAPSSEV 454
Query: 455 CATTGRLTPTMYDQMVAAANASAGLTQYGPVLADLADCSYVRRAFQAVTAAHCPGLRRHS 514
CATTGRLTPTMYDQMVAAANASAGLTQYGPVLADLADCSYVRRAFQAVTAAHCPGLRRHS
Sbjct: 455 CATTGRLTPTMYDQMVAAANASAGLTQYGPVLADLADCSYVRRAFQAVTAAHCPGLRRHS 514
Query: 515 GRVYQXXXXXXXXXXXXXXXXXXHSQXXXXXXXXXXFQVSPYRFPIEEKSLLKSPRRPYR 574
GRVYQ HSQ FQVSPYRFPIEEKSLLKSPRRPYR
Sbjct: 515 GRVYQALLAVSVAVAAAVAAWVAHSQERRRRSETRRFQVSPYRFPIEEKSLLKSPRRPYR 574
Query: 575 RGDSGRMAR 583
RGDSGRMAR
Sbjct: 575 RGDSGRMAR 583
>Os02g0799300 Conserved hypothetical protein
Length = 546
Score = 288 bits (737), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 148/360 (41%), Positives = 195/360 (54%), Gaps = 4/360 (1%)
Query: 159 FAVSLALLLVFTAVAIIGCIVLYDGQGKFHGSTTATLRFVVNQSDGAVASLRGFSGFIXX 218
+A+SL LL++FT AI+GC++LYDGQGKFH STT TL FVV+Q++ V +L S +
Sbjct: 145 YALSLILLILFTCAAIVGCVMLYDGQGKFHKSTTTTLNFVVSQANFTVENLNNLSDSLSA 204
Query: 219 XXXXXXXXXTLPADLQGKXXXXXXXXXXXXXXXXXXTTTNSRKIRTALETIRTILIXXXX 278
LP D+Q + TT NS KI+ L +R LI
Sbjct: 205 AKKVDIGRSFLPNDVQNQINEIQGKLNSSATELATRTTDNSEKIQKLLNQVRIALIIIAA 264
Query: 279 XXXXXXXXXXXFSLCGLKSLVYTLVIFGWILVTATFILSGTFLLLHNAVGDTCVAMDEWV 338
S+ GL+ +V LVI GWILVT TFIL G FLLLHN V DTCV+M+EWV
Sbjct: 265 VMLLLAFIGFLLSIFGLEFIVSILVIIGWILVTGTFILCGVFLLLHNVVADTCVSMEEWV 324
Query: 339 LHPQGHTALDDILPCVDAAATSDALRRSKEVNYQIVSXXXXXXXXXXXXXXXXXXXXXXX 398
HP HTALDDI+PCV+ A +++L RS++V YQ+V+
Sbjct: 325 AHPTEHTALDDIIPCVEPATANESLYRSRQVTYQLVN---LVNQVITNVSNGNFPPQTPF 381
Query: 399 XXYRQSGTPVPLLCNPYNGDLSDRXXXXXXXXXXXXXXXWRGYVCRATGAAPSSEVCATT 458
+ QSG +P LCNP+ DL++R W+ + C+ T + +E+C T
Sbjct: 382 FYFNQSGPLMPTLCNPFTADLNNRTCTRGEVTLDNATRVWKNFECQTTTVS-GTEICTTV 440
Query: 459 GRLTPTMYDQMVAAANASAGLTQYGPVLADLADCSYVRRAFQAVTAAHCPGLRRHSGRVY 518
GR+TPT+ QM A N S GL QYGP L L DC++VR F + HCPGL R+S VY
Sbjct: 441 GRVTPTILGQMAAGVNVSQGLYQYGPFLIQLEDCTFVRDTFTNINQNHCPGLERYSKWVY 500
>Os04g0644000 Conserved hypothetical protein
Length = 546
Score = 266 bits (679), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 142/360 (39%), Positives = 190/360 (52%), Gaps = 4/360 (1%)
Query: 159 FAVSLALLLVFTAVAIIGCIVLYDGQGKFHGSTTATLRFVVNQSDGAVASLRGFSGFIXX 218
+ +SL LL++FT I GCI+L+ GQ FH ST T+ ++V Q + V SLR FSG +
Sbjct: 158 YFISLILLIIFTLATIAGCIILHCGQELFHSSTIKTVDYIVGQGNLTVDSLRNFSGSLAA 217
Query: 219 XXXXXXXXXTLPADLQGKXXXXXXXXXXXXXXXXXXTTTNSRKIRTALETIRTILIXXXX 278
LP +Q K NS+KI+ ++ ++ L+
Sbjct: 218 AKNIGVDQVFLPVQVQQKIDVIEDKLNSSANEFSTRALENSKKIKHVMDKMQYNLMVIAA 277
Query: 279 XXXXXXXXXXXFSLCGLKSLVYTLVIFGWILVTATFILSGTFLLLHNAVGDTCVAMDEWV 338
FS+ GL+ LV LVI GW ++ T ++S FLLLHN V DTCVAMD+WV
Sbjct: 278 VMLGLAIFGFLFSILGLRFLVSLLVIAGWFVLVITIMMSAAFLLLHNVVADTCVAMDDWV 337
Query: 339 LHPQGHTALDDILPCVDAAATSDALRRSKEVNYQIVSXXXXXXXXXXXXXXXXXXXXXXX 398
HPQ HTALDDILPCVD A ++++ RS+EV Q+V+
Sbjct: 338 THPQAHTALDDILPCVDVATANESMYRSEEVTVQLVALVNNVIVNISNRDFPPSFRPLYI 397
Query: 399 XXYRQSGTPVPLLCNPYNGDLSDRXXXXXXXXXXXXXXXWRGYVCRATGAAPSSEVCATT 458
QSG +P LC+P+N D+S R W+ + C+ TG P SEVCAT
Sbjct: 398 ---NQSGPLMPKLCDPFNPDMSPRKCAPGEVNFDTAAAEWKKFECQTTG-PPGSEVCATE 453
Query: 459 GRLTPTMYDQMVAAANASAGLTQYGPVLADLADCSYVRRAFQAVTAAHCPGLRRHSGRVY 518
GR+TP Y QM AAA+ S GL QYGP L +L DCS+VR F A++ +CPGL +S VY
Sbjct: 454 GRVTPAAYGQMTAAASISQGLYQYGPFLMELQDCSFVRETFTAISDNNCPGLELYSRHVY 513
>Os02g0183500 Quinonprotein alcohol dehydrogenase-like domain containing protein
Length = 565
Score = 228 bits (581), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 168/429 (39%), Positives = 204/429 (47%), Gaps = 39/429 (9%)
Query: 176 GCIVLYDGQGKFHGSTTATLRFVVNQSDGAVASLRGFSGFIXXXXXXXXXXXTLPADLQG 235
GC VLYDGQG+F GST AT+ +V +S AVASLRGF+ + +LPA ++G
Sbjct: 146 GCGVLYDGQGRFDGSTAATVEYVAGKSGDAVASLRGFASSMEAAKAAGVGPVSLPASVKG 205
Query: 236 KXXXXXXXXXXXXXXXXXXTTTNSRKIRTALETIRTILIXXXXXXXXXXXXXXXFSLCG- 294
+N+ KIR ALETIR ILI + G
Sbjct: 206 SIDGVVRKMSSAADELAARMASNAAKIRDALETIRKILIVVAATMLILAVLGLGWCFLGG 265
Query: 295 ----------LKSLVYT--LVIFGWILVTATFILSG---------TFLL--LHNAVGDTC 331
S YT V+ W +G T LL H+ VGDTC
Sbjct: 266 FWLQQRFCSVAPSFCYTSVEVVILWDKFFEGCYKTGSCCNGIDILTILLHEYHSVVGDTC 325
Query: 332 VAMDEWVLHPQGHTALDDILPCVDAAATSDALRRSKEVNYQIVSXXXXXXXXXXXXXXXX 391
AM EWV PQ TALDDILPCVD AA +DAL RSK+V + +V+
Sbjct: 326 AAMGEWVQRPQARTALDDILPCVDTAAAADALARSKDVTHHLVTVLNGVIANVSNAAAAG 385
Query: 392 XXXXXXXXXYRQSGTPVPLLCNPYNGDLSDRXXXXXXXXXXXXXXXWRGYVCRATGAAPS 451
Y QSG PVPLLC+P G+ D WR VCR T AA +
Sbjct: 386 LPPPLY---YNQSGPPVPLLCSP--GERCD----PGEVDLAAAPRAWRERVCRTTRAAAA 436
Query: 452 S-EVCATTGRLTPTMYDQMVAAANASAGLTQYGPVLADLADCSYVRRAFQAVTAAHCPGL 510
+ EVCAT GRLTP MY QMVAAA+A L++YGPVLAD+ADC++VRRAF+ V HCPGL
Sbjct: 437 APEVCATVGRLTPAMYAQMVAAASACDALSRYGPVLADMADCAFVRRAFRVVGDEHCPGL 496
Query: 511 RRHSGRVYQXXXXXXXXXXXXXXXXXXHSQXXXXXXXXXXFQ--VSPYRF---PIEEKSL 565
RHS VY+ HS+ + SPY +EE +L
Sbjct: 497 GRHSAEVYRGLLAVAVAALASVVLWVAHSRERRRRRDAVELRAAASPYTVHHSHLEEGAL 556
Query: 566 LKSPRRPYR 574
LKSPR YR
Sbjct: 557 LKSPRMMYR 565
>Os01g0121300 Conserved hypothetical protein
Length = 540
Score = 205 bits (521), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 113/350 (32%), Positives = 162/350 (46%), Gaps = 14/350 (4%)
Query: 163 LALLLVFTAVAIIGCIVLYDGQGKFHGSTTATLRFVVNQSDGAVASLRGFSGFIXXXXXX 222
L LL+VF G ++L+ GQ KF T+T+ FVVNQSD + +LR + ++
Sbjct: 155 LVLLVVFIFTLTAGSVILFCGQSKFGQEATSTVDFVVNQSDFTIQTLRNVTDYLSLAKTI 214
Query: 223 XXXXXTLPADLQGKXXXXXXXXXXXXXXXXXXTTTNSRKIRTALETIRTILIXXXXXXXX 282
LP+D+QG+ T+ N R+IR L + LI
Sbjct: 215 SVAALYLPSDVQGQIDNLKVDLNKAADTISQKTSENYRRIRKVLHNLSVALICIAALMPV 274
Query: 283 XXXXXXXFSLCGLKSLVYTLVIFGWILVTATFILSGTFLLLHNAVGDTCVAMDEWVLHPQ 342
L G +S VY V W +V FIL G FL+L++A DTC AMDEW HPQ
Sbjct: 275 LAFLGYVLELYGQRSTVYVFVTLCWTVVATLFILLGIFLILNSAAKDTCEAMDEWAQHPQ 334
Query: 343 GHTALDDILPCVDAAATSDALRRSKEVNYQIVSXXXXXXXXXXXXXXXXXXXXXXXXXYR 402
TAL +ILPCVD + T+ L +SK V +V ++
Sbjct: 335 AETALSNILPCVDESTTNQTLYQSKHVVVILVG----------IVNRAISALSNRRPHHK 384
Query: 403 QSGTPVPLLCNPYNGDLSDRXXXXXXXXXXXXXXXWRGYVCRATGAAPSSEVCATTGRLT 462
G +P LC+PY+ +L+DR W Y C P S++C+ +T
Sbjct: 385 HPGQFMPYLCSPYDANLTDRQCKSREVTFDNATTAWLNYTC----TVPDSDLCSGPRTIT 440
Query: 463 PTMYDQMVAAANASAGLTQYGPVLADLADCSYVRRAFQAVTAAHCPGLRR 512
P +Y Q+V AAN S L Y P++ +L DC +VR F ++ + +CP + R
Sbjct: 441 PEIYSQLVLAANVSYALYHYAPLMLNLQDCKFVRNTFSSIASQYCPPIWR 490
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.324 0.135 0.416
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 12,273,905
Number of extensions: 371048
Number of successful extensions: 1260
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 1241
Number of HSP's successfully gapped: 7
Length of query: 583
Length of database: 17,035,801
Length adjustment: 106
Effective length of query: 477
Effective length of database: 11,501,117
Effective search space: 5486032809
Effective search space used: 5486032809
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 159 (65.9 bits)