Os06g0645600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Peptidase S1 and S6, chymotrypsin/Hap domain containing protein.
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Os06g0645600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Peptidase S1 and S6, chymotrypsin/Hap domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 208.32 | 0.678 | 11.9 | 0.318 | 0.0616 | 0.854 | -1.45 | 1.67 | -0.401 | 18.3 | 24.3 | 2881 | -- | -- |
| 211.42 | 0.677 | 11.8 | 0.809 | 0.102 | 0.85 | -1.54 | -- | -0.328 | 18.5 | 24.7 | 2702 | -- | -- |
| 212.85 | 0.679 | 11.9 | 0.323 | 0.133 | 0.892 | -- | 1.83 | -0.432 | 15.6 | 24.6 | 3035 | -- | -- |
| 215.05 | 0.683 | 11.8 | 0.856 | 0.112 | 1.01 | -- | -- | -0.277 | 15.8 | 24.7 | 2969 | -- | -- |
| 213.51 | 0.681 | 11.9 | 0.342 | -- | 0.907 | -- | 1.74 | -0.42 | -- | 24.7 | 2926 | -- | -- |
| 236.52 | 0.721 | 11.9 | 0.48 | 0.152 | -- | -1.31 | -- | -0.549 | 18 | -- | -- | -- | -- |
| 239.79 | 0.725 | 11.9 | 0.496 | 0.191 | -- | -- | -- | -0.552 | 15.3 | -- | -- | -- | -- |
| 215.59 | 0.684 | 11.8 | 0.857 | -- | 1.02 | -- | -- | -0.272 | -- | 24.76 | 2913 | -- | -- |
| 231.9 | 0.709 | 11.9 | -- | 0.0531 | 0.726 | -- | -- | -0.431 | 14.2 | 24.9 | 2702 | -- | -- |
| 241.85 | 0.727 | 11.9 | 0.488 | -- | -- | -- | -- | -0.557 | -- | -- | -- | -- | -- |
| 246.28 | 0.734 | 11.9 | -- | 0.181 | -- | -- | -- | -0.607 | 15.3 | -- | -- | -- | -- |
| 232.07 | 0.71 | 11.9 | -- | -- | 0.735 | -- | -- | -0.439 | -- | 24.88 | 2701 | -- | -- |
| 248.13 | 0.735 | 11.9 | -- | -- | -- | -- | -- | -0.611 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 201.43 | temperature | 30.0 | 720 | > th | dose independent | rect. | 8 | 6 |
| 16 | 202.31 | temperature | 30.0 | 720 | > th | dose independent | rect. | 12 | 2 |
| 22 | 205.51 | temperature | 30.0 | 720 | > th | dose independent | sin | 8 | NA |
| 23 | 205.56 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 20 | 6 |
| 24 | 205.62 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 21 | 4 |
| 51 | 206.29 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 20 | 2 |
| 53 | 206.41 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 24 | 4 |
| 69 | 206.66 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 23 | 1 |
| 104 | 207.35 | temperature | 30.0 | 720 | < th | dose independent | rect. | 6 | 8 |
| 161 | 208.48 | temperature | 30.0 | 720 | > th | dose dependent | rect. | 12 | 1 |
| 170 | 208.63 | temperature | 25.0 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 197 | 208.95 | temperature | 30.0 | 720 | > th | dose dependent | rect. | 8 | 6 |
| 214 | 209.03 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 24 | 1 |
| 224 | 209.10 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 20 | 7 |
| 259 | 209.29 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 23 | 3 |
| 260 | 209.30 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 24 | 1 |
| 262 | 209.30 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 21 | 5 |
| 389 | 209.77 | temperature | 30.0 | 720 | > th | dose dependent | sin | 7 | NA |
| 396 | 209.80 | temperature | 30.0 | 720 | < th | dose independent | rect. | 23 | 15 |
| 400 | 209.82 | temperature | 25.0 | 4320 | < th | dose independent | sin | 13 | NA |
| 413 | 209.89 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 488 | 210.18 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 508 | 210.25 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 509 | 210.25 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 520 | 210.28 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 21 | 2 |
| 528 | 210.31 | temperature | 20.0 | 1440 | > th | dose dependent | sin | 10 | NA |
| 575 | 210.52 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 20 | 3 |
| 578 | 210.53 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 20 | 3 |
| 579 | 210.53 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 20 | 3 |
| 671 | 210.77 | temperature | 30.0 | 720 | < th | dose independent | rect. | 21 | 16 |
| 712 | 210.85 | temperature | 25.0 | 4320 | < th | dose dependent | sin | 14 | NA |
| 901 | 211.33 | temperature | 25.0 | 4320 | > th | dose independent | sin | 13 | NA |
| 974 | 211.53 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 1 | 23 |