Os02g0183500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Quinonprotein alcohol dehydrogenase-like domain containing protein.
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Os02g0183500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Quinonprotein alcohol dehydrogenase-like domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 79.27 | 0.415 | 3.09 | 0.139 | 0.0859 | 3.36 | -0.339 | -0.602 | 0.0383 | 3.67 | 0.5601 | 10 | -- | -- |
| 79.27 | 0.418 | 3.09 | 0.141 | 0.0858 | 3.19 | -0.339 | -- | 0.0383 | 3.67 | 0.5601 | 10 | -- | -- |
| 79.59 | 0.415 | 3.09 | 0.147 | 0.0895 | 3.19 | -- | -0.157 | 0.0401 | 4.64 | 0.6396 | 9 | -- | -- |
| 79.59 | 0.418 | 3.09 | 0.147 | 0.0895 | 3.14 | -- | -- | 0.04 | 4.64 | 0.8451 | 9 | -- | -- |
| 80.01 | 0.417 | 3.09 | 0.15 | -- | 3.19 | -- | -0.0384 | 0.0424 | -- | 0.7966 | 9 | -- | -- |
| 89.28 | 0.443 | 3.09 | 0.175 | 0.116 | -- | -0.176 | -- | 0.033 | 4.07 | -- | -- | -- | -- |
| 89.36 | 0.443 | 3.09 | 0.177 | 0.117 | -- | -- | -- | 0.034 | 4.53 | -- | -- | -- | -- |
| 80.01 | 0.418 | 3.09 | 0.15 | -- | 3.18 | -- | -- | 0.0425 | -- | 0.8451 | 9 | -- | -- |
| 80.15 | 0.419 | 3.09 | -- | 0.0918 | 3.18 | -- | -- | 0.0238 | 4.6 | 0.8451 | 9 | -- | -- |
| 90.09 | 0.444 | 3.09 | 0.181 | -- | -- | -- | -- | 0.037 | -- | -- | -- | -- | -- |
| 90.18 | 0.444 | 3.09 | -- | 0.121 | -- | -- | -- | 0.0143 | 4.49 | -- | -- | -- | -- |
| 80.6 | 0.419 | 3.09 | -- | -- | 3.22 | -- | -- | 0.026 | -- | 0.8219 | 10 | -- | -- |
| 90.96 | 0.445 | 3.09 | -- | -- | -- | -- | -- | 0.0169 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 74.93 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 3 | 23 |
| 2 | 74.93 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 5 | 79.02 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 23 | 23 |
| 6 | 79.02 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 7 | 79.14 | wind | 5.0 | 90 | > th | dose dependent | rect. | 3 | 4 |
| 8 | 79.17 | wind | 5.0 | 90 | > th | dose independent | rect. | 3 | 4 |
| 9 | 79.22 | wind | 3.0 | 10 | > th | dose independent | rect. | 4 | 1 |
| 11 | 79.22 | wind | 3.0 | 10 | > th | dose dependent | rect. | 4 | 1 |
| 16 | 79.27 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 3 | 1 |
| 17 | 79.27 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 4 | 1 |
| 29 | 79.27 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 3 | 1 |
| 30 | 79.27 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 226 | 79.48 | precipitation | 0.1 | 10 | > th | dose dependent | sin | 4 | NA |
| 228 | 79.49 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 354 | 79.65 | precipitation | 0.1 | 10 | > th | dose independent | sin | 4 | NA |
| 416 | 79.77 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 1 | 3 |
| 444 | 79.84 | precipitation | 0.1 | 10 | < th | dose independent | sin | 7 | NA |
| 446 | 79.84 | precipitation | 0.1 | 10 | < th | dose dependent | sin | 7 | NA |
| 495 | 80.00 | temperature | 25.0 | 90 | > th | dose independent | rect. | 1 | 3 |
| 513 | 80.06 | precipitation | 0.1 | 10 | < th | dose independent | sin | 4 | NA |
| 515 | 80.06 | precipitation | 0.1 | 10 | < th | dose dependent | sin | 4 | NA |
| 546 | 80.15 | atmosphere | 1005.0 | 90 | > th | dose dependent | rect. | 2 | 1 |
| 600 | 80.31 | temperature | 25.0 | 90 | > th | dose independent | rect. | 2 | 1 |
| 608 | 80.34 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 612 | 80.38 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 614 | 80.38 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 617 | 80.38 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 621 | 80.38 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 630 | 80.38 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 631 | 80.38 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 651 | 80.38 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 23 |
| 655 | 80.38 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 668 | 80.39 | wind | 3.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 674 | 80.39 | wind | 5.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 681 | 80.40 | humidity | 90.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 682 | 80.40 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 686 | 80.40 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 690 | 80.41 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 692 | 80.41 | temperature | 30.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 693 | 80.41 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 697 | 80.41 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 699 | 80.41 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 704 | 80.41 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 705 | 80.41 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 706 | 80.41 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 710 | 80.41 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 715 | 80.41 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 720 | 80.43 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 741 | 80.50 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 751 | 80.53 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 888 | 80.83 | precipitation | 0.1 | 10 | > th | dose dependent | no | NA | NA |