BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0183500 Os02g0183500|Os02g0183500
(565 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0183500 Quinonprotein alcohol dehydrogenase-like domai... 710 0.0
Os06g0645600 Peptidase S1 and S6, chymotrypsin/Hap domain c... 246 3e-65
Os02g0799300 Conserved hypothetical protein 213 2e-55
Os04g0644000 Conserved hypothetical protein 208 9e-54
Os01g0121300 Conserved hypothetical protein 139 6e-33
>Os02g0183500 Quinonprotein alcohol dehydrogenase-like domain containing protein
Length = 565
Score = 710 bits (1833), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/565 (67%), Positives = 382/565 (67%)
Query: 1 MASRAPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGRSSPSTTTFVLAGERTRRKDPL 60
MASRAPP GGGRSSPSTTTFVLAGERTRRKDPL
Sbjct: 1 MASRAPPLLLLLIVLSLVVLAALLAAAAADASAVAGGGRSSPSTTTFVLAGERTRRKDPL 60
Query: 61 DGLRLYSGGWNISDEHYWASXXXXXXXXXXXXXXXXXXXXXSLFLAXXXXXXXXXXXXXX 120
DGLRLYSGGWNISDEHYWAS SLFLA
Sbjct: 61 DGLRLYSGGWNISDEHYWASVGFTVAPVFAAAAIWFVVFGVSLFLAGCCFCCCPGSSRGG 120
Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXLYDGQGRFDGSTAATVEYVAGKSGDAVASLR 180
LYDGQGRFDGSTAATVEYVAGKSGDAVASLR
Sbjct: 121 GGSYSCTALVVSLVLLLAFTAAAAVGCGVLYDGQGRFDGSTAATVEYVAGKSGDAVASLR 180
Query: 181 GFASSMEAAKAAGVGPVSLPASVKGSIDGVVRKMSSAADELAARMASNAAKIRDALETIR 240
GFASSMEAAKAAGVGPVSLPASVKGSIDGVVRKMSSAADELAARMASNAAKIRDALETIR
Sbjct: 181 GFASSMEAAKAAGVGPVSLPASVKGSIDGVVRKMSSAADELAARMASNAAKIRDALETIR 240
Query: 241 KILIVVAATMLILAVXXXXXXXXXXXXXQQRFCSVAPSFCYTSVEVVILWDKFFEGCYKT 300
KILIVVAATMLILAV QQRFCSVAPSFCYTSVEVVILWDKFFEGCYKT
Sbjct: 241 KILIVVAATMLILAVLGLGWCFLGGFWLQQRFCSVAPSFCYTSVEVVILWDKFFEGCYKT 300
Query: 301 GSCCNGIDILTILLHEYHSVVGDTCAAMGEWVQRPQARTALDDILPCVDTXXXXXXXXRS 360
GSCCNGIDILTILLHEYHSVVGDTCAAMGEWVQRPQARTALDDILPCVDT RS
Sbjct: 301 GSCCNGIDILTILLHEYHSVVGDTCAAMGEWVQRPQARTALDDILPCVDTAAAADALARS 360
Query: 361 KDVTHHLVTVLNGVIANVSNXXXXGLPPPLYYNQSGPPVPLLCSPGERCDPGEVDLAAAP 420
KDVTHHLVTVLNGVIANVSN GLPPPLYYNQSGPPVPLLCSPGERCDPGEVDLAAAP
Sbjct: 361 KDVTHHLVTVLNGVIANVSNAAAAGLPPPLYYNQSGPPVPLLCSPGERCDPGEVDLAAAP 420
Query: 421 RAWXXXXXXXXXXXXXXXXXXXXXGRLTPXXXXXXXXXXXXCDALSRYGPVLADMADCAF 480
RAW GRLTP CDALSRYGPVLADMADCAF
Sbjct: 421 RAWRERVCRTTRAAAAAPEVCATVGRLTPAMYAQMVAAASACDALSRYGPVLADMADCAF 480
Query: 481 VRRAFRVVGDEHCPGLGRHSAEVYRGXXXXXXXXXXXXXXXXXHSXXXXXXXXXXXXXXX 540
VRRAFRVVGDEHCPGLGRHSAEVYRG HS
Sbjct: 481 VRRAFRVVGDEHCPGLGRHSAEVYRGLLAVAVAALASVVLWVAHSRERRRRRDAVELRAA 540
Query: 541 XSPYTVHHSHLEEGALLKSPRMMYR 565
SPYTVHHSHLEEGALLKSPRMMYR
Sbjct: 541 ASPYTVHHSHLEEGALLKSPRMMYR 565
>Os06g0645600 Peptidase S1 and S6, chymotrypsin/Hap domain containing protein
Length = 583
Score = 246 bits (628), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 179/425 (42%), Positives = 218/425 (51%), Gaps = 39/425 (9%)
Query: 150 LYDGQGRFDGSTAATVEYVAGKSGDAVASLRGFASSMEAAKAAGVGPVSLPASVKGSIDG 209
LYDGQG+F GST AT+ +V +S AVASLRGF+ +EAAKAA V +LPA ++G +D
Sbjct: 180 LYDGQGKFHGSTTATLRFVVNQSDGAVASLRGFSGFIEAAKAAAVEKATLPADLQGKVDD 239
Query: 210 VVRKMSSAADELAARMASNAAKIRDALETIRKILIVVAATMLILAVXXXXXXXXXXXXXQ 269
VVR++ ++AD+LAAR +N+ KIR ALETIR ILIVVAA ML LA
Sbjct: 240 VVRRVDASADDLAARTTTNSRKIRTALETIRTILIVVAAVMLALA--------------- 284
Query: 270 QRFCSVAPSFCYTSVEVVILWDKFFEGCYKTGSCCNGIDILTILLHEYHSVVGDTCAAMG 329
F + S C V L F T + IL+ H+ VGDTC AM
Sbjct: 285 --FLGLVFSLCGLKSLVYTL--VIFGWILVTATF-----ILSGTFLLLHNAVGDTCVAMD 335
Query: 330 EWVQRPQARTALDDILPCVDTXXXXXXXXRSKDVTHHLVTVLNGVIANVSNXXX---XGL 386
EWV PQ TALDDILPCVD RSK+V + +V+VLN ++A V+N
Sbjct: 336 EWVLHPQGHTALDDILPCVDAAATSDALRRSKEVNYQIVSVLNNLLATVANANVPASSPP 395
Query: 387 PPPLYYNQSGPPVPLLCSP--GERCD----PGEVDLAAAPRAWXXXXXXXXXXXXXXXXX 440
PP Y QSG PVPLLC+P G+ D GEV A APRAW
Sbjct: 396 SPPASYRQSGTPVPLLCNPYNGDLSDRACAAGEVAAADAPRAW-RGYVCRATGAAPSSEV 454
Query: 441 XXXXGRLTPXXXXXXXXXXXXCDALSRYGPVLADMADCAFVRRAFRVVGDEHCPGLGRHS 500
GRLTP L++YGPVLAD+ADC++VRRAF+ V HCPGL RHS
Sbjct: 455 CATTGRLTPTMYDQMVAAANASAGLTQYGPVLADLADCSYVRRAFQAVTAAHCPGLRRHS 514
Query: 501 AEVYRGXXXXXXXXXXXXXXXXXHSXXXXXXXXXXXXXXXXSPYTVHHSHLEEGALLKSP 560
VY+ HS SPY +EE +LLKSP
Sbjct: 515 GRVYQALLAVSVAVAAAVAAWVAHS--QERRRRSETRRFQVSPY---RFPIEEKSLLKSP 569
Query: 561 RMMYR 565
R YR
Sbjct: 570 RRPYR 574
>Os02g0799300 Conserved hypothetical protein
Length = 546
Score = 213 bits (543), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 127/363 (34%), Positives = 168/363 (46%), Gaps = 32/363 (8%)
Query: 150 LYDGQGRFDGSTAATVEYVAGKSGDAVASLRGFASSMEAAKAAGVGPVSLPASVKGSIDG 209
LYDGQG+F ST T+ +V ++ V +L + S+ AAK +G LP V+ I+
Sbjct: 166 LYDGQGKFHKSTTTTLNFVVSQANFTVENLNNLSDSLSAAKKVDIGRSFLPNDVQNQINE 225
Query: 210 VVRKMSSAADELAARMASNAAKIRDALETIRKILIVVAATMLILAVXXXXXXXXXXXXXQ 269
+ K++S+A ELA R N+ KI+ L +R LI++AA ML+LA
Sbjct: 226 IQGKLNSSATELATRTTDNSEKIQKLLNQVRIALIIIAAVMLLLAFIGF----------- 274
Query: 270 QRFCSVAPSFCYTSVEVVILWDKFFEGCYKTGSCCNGIDILTILLHEYHSVVGDTCAAMG 329
S+ S+ V+I W G IL + H+VV DTC +M
Sbjct: 275 --LLSIFGLEFIVSILVIIGW-----------ILVTGTFILCGVFLLLHNVVADTCVSME 321
Query: 330 EWVQRPQARTALDDILPCVDTXXXXXXXXRSKDVTHHLVTVLNGVIANVSNXXXXGLPPP 389
EWV P TALDDI+PCV+ RS+ VT+ LV ++N VI NVSN P
Sbjct: 322 EWVAHPTEHTALDDIIPCVEPATANESLYRSRQVTYQLVNLVNQVITNVSNGNFPPQTPF 381
Query: 390 LYYNQSGPPVPLLCSP------GERCDPGEVDLAAAPRAWXXXXXXXXXXXXXXXXXXXX 443
Y+NQSGP +P LC+P C GEV L A R W
Sbjct: 382 FYFNQSGPLMPTLCNPFTADLNNRTCTRGEVTLDNATRVW--KNFECQTTTVSGTEICTT 439
Query: 444 XGRLTPXXXXXXXXXXXXCDALSRYGPVLADMADCAFVRRAFRVVGDEHCPGLGRHSAEV 503
GR+TP L +YGP L + DC FVR F + HCPGL R+S V
Sbjct: 440 VGRVTPTILGQMAAGVNVSQGLYQYGPFLIQLEDCTFVRDTFTNINQNHCPGLERYSKWV 499
Query: 504 YRG 506
Y G
Sbjct: 500 YVG 502
>Os04g0644000 Conserved hypothetical protein
Length = 546
Score = 208 bits (529), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 131/370 (35%), Positives = 178/370 (48%), Gaps = 46/370 (12%)
Query: 150 LYDGQGRFDGSTAATVEYVAGKSGDAVASLRGFASSMEAAKAAGVGPVSLPASVKGSIDG 209
L+ GQ F ST TV+Y+ G+ V SLR F+ S+ AAK GV V LP V+ ID
Sbjct: 179 LHCGQELFHSSTIKTVDYIVGQGNLTVDSLRNFSGSLAAAKNIGVDQVFLPVQVQQKIDV 238
Query: 210 VVRKMSSAADELAARMASNAAKIRDALETIRKILIVVAATMLILAVXXXXXXXXXXXXXQ 269
+ K++S+A+E + R N+ KI+ ++ ++ L+V+AA ML LA+
Sbjct: 239 IEDKLNSSANEFSTRALENSKKIKHVMDKMQYNLMVIAAVMLGLAIFGFLFSILGL---- 294
Query: 270 QRFCSVAPSFCYTSVEVVILWDKFFEGCYKTGSCCNGIDILTILLHE----YHSVVGDTC 325
RF S+ V+ W + ++TI++ H+VV DTC
Sbjct: 295 -RF--------LVSLLVIAGW---------------FVLVITIMMSAAFLLLHNVVADTC 330
Query: 326 AAMGEWVQRPQARTALDDILPCVDTXXXXXXXXRSKDVTHHLVTVLNGVIANVSNXXXXG 385
AM +WV PQA TALDDILPCVD RS++VT LV ++N VI N+SN
Sbjct: 331 VAMDDWVTHPQAHTALDDILPCVDVATANESMYRSEEVTVQLVALVNNVIVNISN---RD 387
Query: 386 LPP---PLYYNQSGPPVPLLCSPGE------RCDPGEVDLAAAPRAWXXXXXXXXXXXXX 436
PP PLY NQSGP +P LC P +C PGEV+ A W
Sbjct: 388 FPPSFRPLYINQSGPLMPKLCDPFNPDMSPRKCAPGEVNFDTAAAEW--KKFECQTTGPP 445
Query: 437 XXXXXXXXGRLTPXXXXXXXXXXXXCDALSRYGPVLADMADCAFVRRAFRVVGDEHCPGL 496
GR+TP L +YGP L ++ DC+FVR F + D +CPGL
Sbjct: 446 GSEVCATEGRVTPAAYGQMTAAASISQGLYQYGPFLMELQDCSFVRETFTAISDNNCPGL 505
Query: 497 GRHSAEVYRG 506
+S VY G
Sbjct: 506 ELYSRHVYLG 515
>Os01g0121300 Conserved hypothetical protein
Length = 540
Score = 139 bits (350), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 151/363 (41%), Gaps = 42/363 (11%)
Query: 150 LYDGQGRFDGSTAATVEYVAGKSGDAVASLRGFASSMEAAKAAGVGPVSLPASVKGSIDG 209
L+ GQ +F +TV++V +S + +LR + AK V + LP+ V+G ID
Sbjct: 172 LFCGQSKFGQEATSTVDFVVNQSDFTIQTLRNVTDYLSLAKTISVAALYLPSDVQGQIDN 231
Query: 210 VVRKMSSAADELAARMASNAAKIRDALETIRKILIVVAATMLILAVXXXXXXXXXXXXXQ 269
+ ++ AAD ++ + + N +IR L + LI +AA M +LA Q
Sbjct: 232 LKVDLNKAADTISQKTSENYRRIRKVLHNLSVALICIAALMPVLAF----LGYVLELYGQ 287
Query: 270 QRFCSVAPSFCYTSVEVVILWDKFFEGCYKTGSCCNGIDILTILLHEYHSVVGDTCAAMG 329
+ V + C+T V + + + I IL +S DTC AM
Sbjct: 288 RSTVYVFVTLCWTVVATLFIL----------------LGIFLIL----NSAAKDTCEAMD 327
Query: 330 EWVQRPQARTALDDILPCVDTXXXXXXXXRSKDVTHHLVTVLNGVIANVSNXXXXGLPPP 389
EW Q PQA TAL +ILPCVD +SK V LV ++N I+ +SN
Sbjct: 328 EWAQHPQAETALSNILPCVDESTTNQTLYQSKHVVVILVGIVNRAISALSNRRP------ 381
Query: 390 LYYNQSGPPVPLLCSPGE------RCDPGEVDLAAAPRAWXXXXXXXXXXXXXXXXXXXX 443
++ G +P LCSP + +C EV A AW
Sbjct: 382 -HHKHPGQFMPYLCSPYDANLTDRQCKSREVTFDNATTAWLNYTCTVPDSDLCSGPRT-- 438
Query: 444 XGRLTPXXXXXXXXXXXXCDALSRYGPVLADMADCAFVRRAFRVVGDEHCPGLGRHSAEV 503
+TP AL Y P++ ++ DC FVR F + ++CP + R + V
Sbjct: 439 ---ITPEIYSQLVLAANVSYALYHYAPLMLNLQDCKFVRNTFSSIASQYCPPIWRDLSLV 495
Query: 504 YRG 506
G
Sbjct: 496 SAG 498
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.320 0.135 0.417
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 13,582,572
Number of extensions: 452212
Number of successful extensions: 1283
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 1271
Number of HSP's successfully gapped: 7
Length of query: 565
Length of database: 17,035,801
Length adjustment: 106
Effective length of query: 459
Effective length of database: 11,501,117
Effective search space: 5279012703
Effective search space used: 5279012703
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 159 (65.9 bits)