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Os02g0799300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.03 (0.0274) R2 : 0.635
β1 : -1.35 (0.1) R2dD : 0.15 R2D : 0.0884
β2 : 2.18 (0.0912) R2dC : 0.818 R2C : 0.249
β3 : -0.945 (0.0786) R2dE : 0.213 R2E : -0.373
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.397 (0.0583) R2dN8 : 0.0514 R2N8 : 0.0061
σ : 0.511
deviance : 120.16
__
_____
C
peak time of C : 20.9
E
wheather : temperature
threshold : 15.18
memory length : 108
response mode : > th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 19.2
open length of G : 6.33

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
107.43 0.487 9.03 -1.34 2.19 -0.966 0.84 1.05 -0.404 20.9 14.65 117 19.1 6.55
109.83 0.488 9.03 -1.29 2.21 -0.992 1.76 -- -0.404 21 15.3 111 19.2 6.38
108.53 0.485 9.03 -1.38 2.19 -0.961 -- 1.56 -0.397 20.9 15.22 119 19 6.5
120.16 0.511 9.03 -1.35 2.18 -0.945 -- -- -0.397 20.9 15.18 108 19.2 6.33
138.19 0.548 8.98 -1.49 -- -1.53 -- -0.972 -0.451 -- 1.258 2286 20.5 8.15
139.66 0.554 9.01 -1.29 1.55 -- 1.46 -- -0.391 19.9 -- -- -- --
145.44 0.565 9.01 -1.33 1.56 -- -- -- -0.387 19.7 -- -- -- --
140.58 0.552 8.99 -1.33 -- -1.49 -- -- -0.503 -- 2.497 2347 19.9 7.95
167.89 0.603 9.01 -- 2.13 -0.895 -- -- -0.268 20.7 15.12 107 19.2 6.23
275.75 0.776 8.97 -1.35 -- -- -- -- -0.41 -- -- -- -- --
192.06 0.648 8.98 -- 1.57 -- -- -- -0.239 19.6 -- -- -- --
184.2 0.632 8.94 -- -- -1.71 -- -- -0.283 -- 0.8687 2424 19 7.61
323.88 0.84 8.94 -- -- -- -- -- -0.26 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 109.34 temperature 15.0 90 > th dose independent rect. 19 7
5 110.38 temperature 15.0 10 > th dose independent rect. 20 6
6 110.77 temperature 10.0 90 > th dose dependent rect. 19 7
9 111.13 temperature 15.0 10 > th dose independent rect. 20 19
14 111.68 temperature 10.0 10 > th dose dependent rect. 20 6
20 112.28 temperature 15.0 270 > th dose independent rect. 18 19
21 112.38 atmosphere 1010.0 10 < th dose independent rect. 20 6
23 112.51 temperature 15.0 270 > th dose independent rect. 19 16
39 113.50 temperature 15.0 30 > th dose independent rect. 20 17
48 113.84 radiation 40.0 30 < th dose dependent rect. 20 17
58 114.22 radiation 40.0 90 < th dose dependent rect. 13 6
63 114.33 precipitation 0.1 90 < th dose independent rect. 19 7
64 114.33 precipitation 0.1 90 < th dose dependent rect. 19 7
65 114.43 humidity 50.0 270 > th dose independent rect. 18 19
66 114.45 temperature 15.0 270 > th dose independent rect. 20 1
70 114.51 temperature 30.0 90 < th dose independent rect. 19 7
71 114.51 humidity 50.0 90 > th dose independent rect. 19 7
73 114.51 atmosphere 995.0 90 > th dose independent rect. 19 7
74 114.51 radiation 1.0 90 < th dose independent rect. 19 7
79 114.51 temperature 10.0 90 > th dose independent rect. 2 17
80 114.51 atmosphere 1015.0 90 < th dose independent rect. 2 17
81 114.51 radiation 1.0 90 < th dose dependent rect. 19 7
87 114.60 radiation 20.0 10 < th dose independent rect. 13 7
88 114.61 humidity 50.0 10 > th dose independent rect. 20 19
93 114.68 wind 9.0 90 < th dose independent rect. 19 7
95 114.69 temperature 15.0 270 > th dose dependent rect. 20 1
97 114.80 radiation 40.0 10 < th dose dependent rect. 13 7
104 114.92 radiation 40.0 270 < th dose dependent rect. 19 16
109 114.99 precipitation 0.1 10 < th dose independent rect. 20 19
110 114.99 precipitation 0.1 10 < th dose dependent rect. 20 19
114 115.07 humidity 50.0 270 > th dose independent rect. 17 22
125 115.08 humidity 50.0 270 > th dose independent rect. 5 9
134 115.10 precipitation 0.1 270 < th dose independent rect. 18 19
135 115.10 precipitation 0.1 270 < th dose dependent rect. 18 19
139 115.14 wind 1.0 270 > th dose independent rect. 13 5
149 115.26 wind 9.0 90 < th dose independent rect. 2 17
151 115.32 atmosphere 995.0 270 > th dose independent rect. 18 19
158 115.41 temperature 10.0 270 > th dose independent rect. 13 5
160 115.41 atmosphere 1010.0 270 < th dose independent rect. 13 5
164 115.42 radiation 40.0 90 < th dose independent rect. 13 7
167 115.44 precipitation 0.1 90 < th dose independent rect. 2 17
168 115.44 precipitation 0.1 90 < th dose dependent rect. 2 17
172 115.46 radiation 40.0 270 < th dose independent rect. 18 19
175 115.52 radiation 20.0 43200 < th dose dependent rect. 21 6
176 115.53 precipitation 0.1 10 < th dose independent rect. 20 6
177 115.53 precipitation 0.1 10 < th dose dependent rect. 20 6
180 115.55 atmosphere 995.0 90 > th dose independent rect. 2 17
181 115.55 wind 9.0 270 < th dose independent rect. 18 19
183 115.56 temperature 30.0 10 < th dose independent rect. 20 6
184 115.56 humidity 50.0 10 > th dose independent rect. 20 6
187 115.56 atmosphere 995.0 10 > th dose independent rect. 20 6
188 115.56 radiation 1.0 10 < th dose independent rect. 20 6
193 115.56 temperature 10.0 10 > th dose independent rect. 2 18
195 115.56 atmosphere 1015.0 10 < th dose independent rect. 2 18
196 115.56 radiation 40.0 90 < th dose dependent rect. 15 4
197 115.56 radiation 1.0 10 < th dose dependent rect. 20 6
205 115.59 precipitation 0.1 270 < th dose independent rect. 13 5
206 115.59 precipitation 0.1 270 < th dose dependent rect. 13 5
210 115.61 temperature 30.0 270 < th dose independent rect. 19 16
223 115.71 wind 9.0 10 < th dose independent rect. 20 6
224 115.71 wind 1.0 270 > th dose independent rect. 11 8
226 115.76 wind 1.0 30 > th dose independent rect. 15 5
227 115.77 precipitation 0.1 270 < th dose independent rect. 15 1
228 115.77 radiation 40.0 270 < th dose independent rect. 19 16
229 115.77 precipitation 0.1 270 < th dose dependent rect. 15 1
232 115.81 radiation 40.0 270 < th dose independent rect. 13 4
233 115.81 wind 1.0 90 > th dose independent rect. 19 8
234 115.82 temperature 10.0 270 > th dose independent rect. 15 1
236 115.82 atmosphere 1010.0 270 < th dose independent rect. 15 1
238 115.82 temperature 10.0 270 > th dose independent rect. 16 23
239 115.83 precipitation 0.1 270 < th dose independent rect. 17 21
240 115.83 precipitation 0.1 270 < th dose dependent rect. 17 21
242 115.85 wind 1.0 270 > th dose independent rect. 15 1
243 115.85 temperature 10.0 10 > th dose independent rect. 15 5
245 115.85 atmosphere 1010.0 10 < th dose independent rect. 15 5
248 115.85 atmosphere 995.0 10 > th dose independent rect. 20 19
250 115.90 wind 9.0 270 < th dose independent rect. 13 5
251 115.90 radiation 40.0 10 < th dose independent rect. 15 5
254 115.91 humidity 60.0 270 > th dose independent rect. 19 16
259 115.93 radiation 1.0 1440 < th dose dependent rect. 21 6
267 115.98 temperature 10.0 270 > th dose independent rect. 24 18
268 115.98 atmosphere 1015.0 270 < th dose independent rect. 24 18
284 116.09 precipitation 0.1 10 < th dose independent rect. 15 5
299 116.09 precipitation 0.1 10 < th dose dependent rect. 15 5
314 116.12 precipitation 0.1 270 < th dose independent rect. 19 16
318 116.12 precipitation 0.1 270 < th dose dependent rect. 19 16
323 116.16 humidity 90.0 270 < th dose independent rect. 15 1
326 116.17 temperature 15.0 270 > th dose independent rect. 11 8
341 116.25 wind 1.0 270 > th dose independent rect. 14 3
351 116.27 humidity 50.0 10 > th dose independent rect. 15 5
353 116.27 precipitation 0.1 270 < th dose independent rect. 16 23
354 116.27 precipitation 0.1 270 < th dose dependent rect. 16 23
358 116.30 atmosphere 995.0 270 > th dose independent rect. 17 21
362 116.31 temperature 10.0 1440 > th dose independent rect. 16 5
374 116.31 temperature 10.0 1440 > th dose independent rect. 21 19
389 116.35 wind 9.0 270 < th dose independent rect. 17 21
396 116.37 precipitation 0.1 270 < th dose independent rect. 14 3
398 116.37 wind 9.0 10 < th dose independent rect. 20 19
399 116.37 precipitation 0.1 270 < th dose dependent rect. 14 3
403 116.39 atmosphere 1015.0 270 < th dose independent rect. 11 8
405 116.39 atmosphere 995.0 270 > th dose independent rect. 19 16
430 116.41 temperature 10.0 1440 > th dose independent rect. 21 6
433 116.41 temperature 30.0 1440 < th dose independent rect. 21 6
437 116.41 humidity 50.0 1440 > th dose independent rect. 21 6
443 116.41 atmosphere 995.0 1440 > th dose independent rect. 21 6
444 116.41 radiation 1.0 1440 < th dose independent rect. 21 6
464 116.41 temperature 10.0 1440 > th dose independent rect. 3 18
476 116.49 wind 9.0 270 < th dose independent rect. 15 1
482 116.51 atmosphere 1010.0 270 < th dose independent rect. 20 1
490 116.52 atmosphere 995.0 10 > th dose independent rect. 2 18
493 116.53 humidity 50.0 10 > th dose independent rect. 20 17
499 116.55 precipitation 0.1 270 < th dose independent rect. 24 18
500 116.55 precipitation 0.1 270 < th dose dependent rect. 24 18
501 116.56 wind 1.0 30 > th dose independent rect. 13 7
502 116.56 wind 9.0 270 < th dose independent rect. 24 18
513 116.62 wind 9.0 270 < th dose independent rect. 19 16
514 116.62 wind 9.0 10 < th dose independent rect. 2 18
518 116.64 radiation 20.0 90 < th dose independent rect. 15 4
529 116.67 atmosphere 995.0 10 > th dose independent rect. 15 5
531 116.69 precipitation 0.1 270 < th dose independent rect. 11 8
532 116.69 precipitation 0.1 270 < th dose dependent rect. 11 8
536 116.71 precipitation 0.1 270 < th dose independent rect. 5 9
540 116.71 precipitation 0.1 270 < th dose dependent rect. 5 9
544 116.72 atmosphere 1015.0 10 < th dose dependent rect. 20 6
552 116.77 radiation 40.0 270 < th dose independent rect. 13 16
555 116.78 wind 9.0 270 < th dose independent rect. 14 3
558 116.80 wind 9.0 30 < th dose independent rect. 15 5
573 116.83 radiation 40.0 30 < th dose independent rect. 20 16
580 116.88 atmosphere 995.0 90 > th dose independent rect. 15 4
581 116.89 precipitation 0.1 10 < th dose independent rect. 20 17
583 116.89 precipitation 0.1 10 < th dose dependent rect. 20 17
584 116.91 atmosphere 995.0 270 > th dose independent rect. 13 5
633 116.98 humidity 90.0 270 < th dose independent rect. 14 3
641 117.01 wind 9.0 270 < th dose independent rect. 11 8
644 117.01 precipitation 0.1 10 < th dose independent rect. 2 18
645 117.01 precipitation 0.1 10 < th dose dependent rect. 2 18
661 117.06 temperature 10.0 270 > th dose independent rect. 5 9
662 117.06 atmosphere 995.0 270 > th dose independent rect. 5 9
663 117.06 atmosphere 1015.0 270 < th dose independent rect. 5 9
664 117.06 temperature 10.0 270 > th dose independent rect. 14 15
683 117.08 wind 9.0 270 < th dose independent rect. 5 9
689 117.10 radiation 40.0 270 < th dose independent rect. 15 1
702 117.15 atmosphere 995.0 270 > th dose independent rect. 15 1
726 117.21 atmosphere 995.0 270 > th dose independent rect. 24 18
749 117.29 humidity 90.0 270 < th dose independent rect. 13 5
757 117.32 wind 9.0 270 < th dose independent rect. 14 15
758 117.34 radiation 20.0 30 < th dose independent rect. 20 17
759 117.34 atmosphere 1015.0 270 < th dose dependent rect. 19 4
792 117.46 temperature 30.0 270 < th dose independent rect. 18 19
847 117.54 wind 9.0 10 < th dose dependent rect. 20 6
866 117.63 atmosphere 1015.0 270 < th dose dependent rect. 18 6
890 117.69 temperature 10.0 1440 > th dose independent rect. 14 7
894 117.69 temperature 10.0 1440 > th dose independent rect. 21 17
897 117.69 atmosphere 995.0 1440 > th dose independent rect. 21 17
943 117.77 precipitation 0.1 270 < th dose independent rect. 19 3
946 117.77 precipitation 0.1 270 < th dose dependent rect. 19 3
950 117.81 temperature 30.0 270 < th dose independent rect. 19 3
951 117.81 humidity 50.0 270 > th dose independent rect. 19 3
952 117.81 atmosphere 995.0 270 > th dose independent rect. 19 3
953 117.81 radiation 1.0 270 < th dose independent rect. 19 3
958 117.81 temperature 10.0 270 > th dose independent rect. 22 21
959 117.81 radiation 1.0 270 < th dose dependent rect. 19 3
997 117.92 radiation 10.0 270 < th dose dependent rect. 6 18