BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0799300 Os02g0799300|AK064917
(546 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G12400.1 | chr2:5005144-5008140 REVERSE LENGTH=542 582 e-166
AT2G25270.1 | chr2:10759779-10762358 FORWARD LENGTH=546 502 e-142
AT1G80540.1 | chr1:30281638-30284258 REVERSE LENGTH=539 361 e-100
AT1G71110.1 | chr1:26818244-26820852 FORWARD LENGTH=558 360 e-99
AT5G67550.1 | chr5:26946908-26949112 REVERSE LENGTH=510 64 2e-10
>AT2G12400.1 | chr2:5005144-5008140 REVERSE LENGTH=542
Length = 541
Score = 582 bits (1500), Expect = e-166, Method: Compositional matrix adjust.
Identities = 287/497 (57%), Positives = 353/497 (71%), Gaps = 5/497 (1%)
Query: 49 RRSIAEAPVDVNVTTNSSFVLAQERTYRKDPLNGFRKYTGGWNISEVHYMASVGYTAFPL 108
R S+ E + NSS +LA +RT RKDP + F+ YTGGWNIS HY+ SVGYTA P
Sbjct: 47 RTSVIERVIAEESGENSSLILAAKRTRRKDPADNFKLYTGGWNISNSHYLTSVGYTAAPF 106
Query: 109 FIIAXXXXXXXXXXMLGICCKHCCCPHRSYTYSRVAYALSLILLILFTCAAIVGCVMLYD 168
IIA + IC +CCC +SY YSRVAYALSLILLI FT AAI+GCV LY
Sbjct: 107 IIIALVWFVFFGLSLSLICLCYCCCARQSYGYSRVAYALSLILLISFTIAAIIGCVFLYT 166
Query: 169 GQGKFHKSTTTTLNFVVSQANFTVENLNNLSDSLSAAKKVDIGRSFLPNDVQNQINEIQG 228
GQGKFH STT TL++VVSQAN T ENL N+SD L+AAKKVD+ S LP DV + I+ IQG
Sbjct: 167 GQGKFHASTTDTLDYVVSQANLTSENLRNVSDYLNAAKKVDVQSSILPQDVLSSIDNIQG 226
Query: 229 KLNSSATELATRTTDNSEKIQKLLNQVRXXXXXXXXXXXXXXFIGFLLSIFGLEFIVSIL 288
K+NSSAT L+ +T +N +KIQ +L+ +R FIGFLLSIFGL+ +V L
Sbjct: 227 KINSSATTLSVKTMENQDKIQNVLDIMRLALVIIAAVMLFLAFIGFLLSIFGLQCLVYTL 286
Query: 289 VIIGWILVTGTFILCGVFLLLHNVVADTCVSMEEWVAHPTEHTALDDIIPCVEPATANES 348
VI+GWILVT TF+LCG FLLLHNVV DTCV+M++WV +PT HTALDDI+PCV+ ATA E+
Sbjct: 287 VILGWILVTVTFVLCGGFLLLHNVVGDTCVAMDQWVQNPTAHTALDDILPCVDNATARET 346
Query: 349 LYRSRQVTYQLVNLVNQVITNVSNGNFPPQTPFFYFNQSGPLMPTLCNPFTADLNNRTCT 408
L R++ VTYQLVNL++ I+N++N NFPPQ Y+NQSGPLMP LCNPF ADL++R C
Sbjct: 347 LTRTKLVTYQLVNLLDNAISNMTNRNFPPQFRPLYYNQSGPLMPLLCNPFNADLSDRQCQ 406
Query: 409 RGEVTLDNATRVWKNFECQTTTVSGTEICTTVGRVTPTILGQMAAGVNVSQGLYQYGPFL 468
G+V L+NAT VWKNF CQ T GT C+T GR+TP + QMAA VNVS GLY+YGPFL
Sbjct: 407 PGQVHLNNATEVWKNFTCQIVT-PGT--CSTPGRLTPKLYSQMAAAVNVSYGLYKYGPFL 463
Query: 469 IQLEDCTFVRDTFTNINQNHCPGLERYSKWVYXXXXXXXXXXXXXXXFWVIYARERRHRA 528
L+ C FVR TFT+I ++HCPGL+RY++W+Y FWVIYARERRHR
Sbjct: 464 ADLQGCDFVRSTFTDIERDHCPGLKRYTQWIYVGLVVVSASVMSSLVFWVIYARERRHRV 523
Query: 529 YSKQHN--YADKPHPTG 543
Y+K +N +++ P G
Sbjct: 524 YTKDYNAMHSEDPRSKG 540
>AT2G25270.1 | chr2:10759779-10762358 FORWARD LENGTH=546
Length = 545
Score = 502 bits (1293), Expect = e-142, Method: Compositional matrix adjust.
Identities = 248/512 (48%), Positives = 331/512 (64%), Gaps = 10/512 (1%)
Query: 23 THPSPGFHAPREFHKALVPDRYGFVARRSIAEAPV-------DVNVTTNSSFVLAQERTY 75
+H + H A ++ G V + +AEAP+ + V +S LA +RTY
Sbjct: 19 SHGASTIHISPTQPPAASSEKTGSVMKFIVAEAPLLGPAGFNNPQVIEVASVALAAQRTY 78
Query: 76 RKDPLNGFRKYTGGWNISEVHYMASVGYTAFPLFIIAXXXXXXXXXXMLGICCKHCCCPH 135
RKDPLNGF KYTGGWNIS HY ASV YTA PLF++A +L IC H C
Sbjct: 79 RKDPLNGFEKYTGGWNISNQHYWASVSYTAVPLFVLAAVWFLGFGICLLVICMCHICHRT 138
Query: 136 RSYTYSRVAYALSLILLILFTCAAIVGCVMLYDGQGKFHKSTTTTLNFVVSQANFTVENL 195
S YS+VAY +SLI L++FT AI+GCV+LY GQ +++KSTT TL +V+SQA+ T+ L
Sbjct: 139 NSVGYSKVAYVVSLIFLLIFTVIAIIGCVLLYSGQIRYNKSTTETLEYVMSQADSTISQL 198
Query: 196 NNLSDSLSAAKKVDIGRSFLPNDVQNQINEIQGKLNSSATELATRTTDNSEKIQKLLNQV 255
+SD L++AK+ + + LP +VQ +I++I KL+SS + ++T++S I+ L+ V
Sbjct: 199 RAISDYLASAKQAAVLQVLLPANVQTEIDQIGVKLDSSVATITEKSTNSSNHIRHFLDSV 258
Query: 256 RXXXXXXXXXXXXXXFIGFLLSIFGLEFIVSILVIIGWILVTGTFILCGVFLLLHNVVAD 315
R F+G + SIFG++ IV LVI+GWILVTGTFIL G FL+LHN AD
Sbjct: 259 RVALIVVSIVMLVVTFLGLVSSIFGMQVIVYTLVILGWILVTGTFILSGTFLVLHNATAD 318
Query: 316 TCVSMEEWVAHPTEHTALDDIIPCVEPATANESLYRSRQVTYQLVNLVNQVITNVSNGNF 375
TCV+M EWV P+ +TALD+I+PC + ATA E+L RSR+VT QLV L+N VITNVSN NF
Sbjct: 319 TCVAMSEWVERPSSNTALDEILPCTDNATAQETLMRSREVTGQLVELINTVITNVSNINF 378
Query: 376 PPQTPFFYFNQSGPLMPTLCNPFTADLNNRTCTRGEVTLDNATRVWKNFECQTTTVSGTE 435
P Y+NQSGPL+P LCNPF DL +R+C+ G++ L+NAT W +F CQ VS
Sbjct: 379 SPVFVPMYYNQSGPLLPLLCNPFNHDLTDRSCSPGDLDLNNATEAWTSFVCQ---VSQNG 435
Query: 436 ICTTVGRVTPTILGQMAAGVNVSQGLYQYGPFLIQLEDCTFVRDTFTNINQNHCPGLERY 495
CTT GR+TP + QMA+GVN+S GL + PFL+QL+DC++ + TF +I +HCPGL+RY
Sbjct: 436 TCTTTGRLTPALYSQMASGVNISTGLIRDAPFLVQLQDCSYAKQTFRDITNDHCPGLQRY 495
Query: 496 SKWVYXXXXXXXXXXXXXXXFWVIYARERRHR 527
WVY FW+IY+RERRHR
Sbjct: 496 GYWVYVGLAILATAVMLSLMFWIIYSRERRHR 527
>AT1G80540.1 | chr1:30281638-30284258 REVERSE LENGTH=539
Length = 538
Score = 361 bits (927), Expect = e-100, Method: Compositional matrix adjust.
Identities = 198/489 (40%), Positives = 273/489 (55%), Gaps = 15/489 (3%)
Query: 49 RRSIAEAPVDVNVTTNSSFVLAQERTYRKDPLNGFRKYTGGWNISEVHYMASVGYTAFPL 108
RR I E + VLA ERT R DPLN F Y GWN++ HY+ASVG++A P
Sbjct: 52 RRQILEG------GNGTRLVLAAERTQRPDPLNHFNIYVDGWNVTNSHYIASVGFSAVPF 105
Query: 109 FIIAXXXXXXXXXXMLGICCKHCCCP--HRSYTYSRVAYALSLILLILFTCAAIVGCVML 166
+IA ++ C CCC R+Y YSRV Y LSL+ L+LFT AA++G ML
Sbjct: 106 IVIAIAWFVLLGLFLICSCLCCCCCGCGRRNYGYSRVCYTLSLVFLLLFTIAAVIGSAML 165
Query: 167 YDGQGKFHKSTTTTLNFVVSQANFTVENLNNLSDSLSAAKKVDI-GRSFLPNDVQNQINE 225
Y GQ +F+ S T ++V QA + L +L DS+ +AK + + G + P + + I+
Sbjct: 166 YTGQNEFYGSVERTFMYIVKQATGVLTKLTSLWDSIQSAKDIQLDGHNLFPPEFRGNIDH 225
Query: 226 IQGKLNSSATELATRTTDNSEK-IQKLLNQVRXXXXXXXXXXXXXXFIGFLLSIFGLEFI 284
+ S R + + + + LN VR F+G L S GL +
Sbjct: 226 FNNMIKMSNITYPDRVANQTIRYLTGALNPVRYVLNVIAGVMLAVAFLGLLFSFCGLRVL 285
Query: 285 VSILVIIGWILVTGTFILCGVFLLLHNVVADTCVSMEEWVAHPTEHTALDDIIPCVEPAT 344
V +LVI+GWILVT T +L VFL+ HNVVADTC++M++WV P +AL ++PC++P T
Sbjct: 286 VYLLVILGWILVTATILLSAVFLVFHNVVADTCMAMDQWVHDPAADSALSQLLPCLDPKT 345
Query: 345 ANESLYRSRQVTYQLVNLVNQVITNVSNGN-FPPQTPFFYFNQSGPLMPTLCNPFTADLN 403
E+L ++ +T V++ N NVSN + FPP PF Y NQSGPL+P LCNP +
Sbjct: 346 IGETLDITKTMTATAVDMTNAYTVNVSNHDQFPPNAPF-YHNQSGPLVPLLCNPLDQNHK 404
Query: 404 NRTCTRGEVTLDNATRVWKNFECQTTTVSGTEICTTVGRVTPTILGQMAAGVNVSQGLYQ 463
R C EV L NA++V+K + CQ V+ ICTT GR+T QM +NV+ L
Sbjct: 405 PRPCAPDEVLLANASQVYKGYICQ---VNAEGICTTQGRLTQGSYDQMMGAINVAFTLDH 461
Query: 464 YGPFLIQLEDCTFVRDTFTNINQNHCPGLERYSKWVYXXXXXXXXXXXXXXXFWVIYARE 523
YGPFL + DCTFVRDTF +I +CPGL S+W+Y FW+I+ RE
Sbjct: 462 YGPFLASIADCTFVRDTFRDITTKNCPGLSITSQWIYAGLASLSGAVMFSLIFWLIFVRE 521
Query: 524 RRHRAYSKQ 532
RRHR+ +K+
Sbjct: 522 RRHRSQTKK 530
>AT1G71110.1 | chr1:26818244-26820852 FORWARD LENGTH=558
Length = 557
Score = 360 bits (924), Expect = e-99, Method: Compositional matrix adjust.
Identities = 194/496 (39%), Positives = 284/496 (57%), Gaps = 13/496 (2%)
Query: 51 SIAEAPVDVNVTTNSSFVLAQERTYRKDPLNGFRKYTGGWNISEVHYMASVGYTAFPLFI 110
S+A P +V ++ +LA RT R D L F+ Y GGWNI+ HY ASVG+T P FI
Sbjct: 51 SLAPGPESDDVVSDY-LLLAAHRTKRPDILRAFKPYHGGWNITNNHYWASVGFTGAPGFI 109
Query: 111 IAXXXXXXXXXXMLGICCKHCCCPHRSYTYSRVAYALSLILLILFTCAAIVGCVMLYDGQ 170
+A ++ C ++ S + ILLI+FTC A VGC++L GQ
Sbjct: 110 LAVIWLLSFGSLLVVYHCFKWRICDKAKGSSFDTRRICFILLIVFTCVAAVGCILLSVGQ 169
Query: 171 GKFHKSTTTTLNFVVSQANFTVENLNNLSDSLSAAKKVDIGRSFLPNDVQNQINEIQGKL 230
KFH TL +VV+Q+++TVE L N++ LS AK +++ + +P+DV +I+++ L
Sbjct: 170 DKFHTEAMHTLKYVVNQSDYTVEILQNVTQYLSLAKTINVTQIVIPSDVMGEIDKLNVNL 229
Query: 231 NSSATELATRTTDNSEKIQKLLNQVRXXXXXXXXXXXXXXFIGFLLSIFGLEFIVSILVI 290
N++A L TTDN+ KI+++ VR F+G LLS+ + +V I V+
Sbjct: 230 NTAAVTLGETTTDNAAKIKRVFYAVRSALITVATVMLILSFVGLLLSVLRHQHVVHIFVV 289
Query: 291 IGWILVTGTFILCGVFLLLHNVVADTCVSMEEWVAHPTEHTALDDIIPCVEPATANESLY 350
GWILV TF+LCGVFL+L+N ++DTCV+M+EWV +P TAL I+PCV+ T N++L
Sbjct: 290 SGWILVAVTFVLCGVFLILNNAISDTCVAMKEWVDNPHAETALSSILPCVDQQTTNQTLS 349
Query: 351 RSRQVTYQLVNLVNQVITNVSNGNFPPQTPFFYFNQSGPLMPTLCNPFTADLNNRTCTRG 410
+S+ V +V +VN + V+N N P Y+NQSGP MP LC PF A++ +R C+
Sbjct: 350 QSKVVINSIVTVVNTFVYAVANTNPAPGQD-RYYNQSGPPMPPLCIPFDANMEDRQCSPW 408
Query: 411 EVTLDNATRVWKNFECQTTTVSGTEICTTVGRVTPTILGQMAAGVNVSQGLYQYGPFLIQ 470
E++++NA+ VW+N++C+ V+ + ICTTVGRVTP GQ+ A VN S L Y P L+
Sbjct: 409 ELSIENASSVWENYKCE---VTPSGICTTVGRVTPDTFGQLVAAVNESYALEHYTPPLLS 465
Query: 471 LEDCTFVRDTFTNINQNHCPGLERYSKWVYXXXXXXXXXXXXXXXFWVIYA-RERRHRAY 529
DC FVR+TF +I ++CP L R + V W+ YA R +R +
Sbjct: 466 FRDCNFVRETFMSITSDYCPPLVRNLRIVNAGLGLISVGVLLCLVLWIFYANRPQREEVF 525
Query: 530 SKQHNYADKPHPTGPD 545
+ PHP D
Sbjct: 526 A-------DPHPQRKD 534
>AT5G67550.1 | chr5:26946908-26949112 REVERSE LENGTH=510
Length = 509
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 93/213 (43%), Gaps = 20/213 (9%)
Query: 287 ILVIIGWILVTGTFILCGVFLLLHNVVADTCVSMEEWVAHPTEHTALDDIIPCVEPATAN 346
+++ + WI+ T ++L G +H D C + +V +P T L ++ PC++P ++
Sbjct: 249 MVIFLCWIITTLCWVLTGFDFFIHTFAEDLCSAFNGFVQNPRNST-LTNLFPCMDPLHSD 307
Query: 347 ESLYRSRQVTYQLVNLVNQVITNV-----SNGNFPPQTPFFYFNQSGPLMPTLCNPFTAD 401
++L +++ + N + Q+ + V SN + +SG +C+PF
Sbjct: 308 KTLI---EISLMIHNFITQLNSKVAESMRSNALTDRSNTVSWAPESG----IICDPFVGQ 360
Query: 402 LNN----RTCTRGEVTLDNATRVWKNFECQTTTVSGTEICTTVGRVTP-TILGQMAAGVN 456
N ++C+ G + + + F C E C G+ P ++ A N
Sbjct: 361 QINSYTPQSCSNGAIPIGEFPNILSRFTCHDK--DPPETCRITGKFIPEAAYLKVYAYSN 418
Query: 457 VSQGLYQYGPFLIQLEDCTFVRDTFTNINQNHC 489
+QG+ P L +C V+DT ++I N C
Sbjct: 419 SAQGMLDILPSFQNLTECLAVKDTLSSIVSNQC 451
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.323 0.136 0.427
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 10,687,195
Number of extensions: 404410
Number of successful extensions: 995
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 984
Number of HSP's successfully gapped: 5
Length of query: 546
Length of database: 11,106,569
Length adjustment: 103
Effective length of query: 443
Effective length of database: 8,282,721
Effective search space: 3669245403
Effective search space used: 3669245403
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 114 (48.5 bits)